BLASTX nr result

ID: Coptis24_contig00020579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020579
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526387.1| conserved hypothetical protein [Ricinus comm...    73   4e-14
ref|XP_003552902.1| PREDICTED: uncharacterized protein LOC100784...    70   9e-13
ref|XP_002263126.1| PREDICTED: uncharacterized protein LOC100255...    68   1e-12
emb|CBI15783.3| unnamed protein product [Vitis vinifera]               68   1e-12
ref|XP_003538350.1| PREDICTED: uncharacterized protein LOC100780...    68   3e-12

>ref|XP_002526387.1| conserved hypothetical protein [Ricinus communis]
           gi|223534249|gb|EEF35963.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score = 73.2 bits (178), Expect(3) = 4e-14
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = +3

Query: 195 IEGDKVIGCSELLKACESMGVTKSHDEAVAFARVLDEAGVILLFRDK 335
           IEG ++I  S+L+KACESMGV +S DEA AFARVLDEAGV+LLFRDK
Sbjct: 99  IEGKEIITYSDLIKACESMGVARSQDEAAAFARVLDEAGVVLLFRDK 145



 Score = 26.9 bits (58), Expect(3) = 4e-14
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 149 RLVNVEALKKKLGID 193
           RLVNVE+LK KLGI+
Sbjct: 86  RLVNVESLKMKLGIE 100



 Score = 21.9 bits (45), Expect(3) = 4e-14
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 329 R*KVYLHPDNFV 364
           R KVYLHPD  V
Sbjct: 143 RDKVYLHPDKVV 154


>ref|XP_003552902.1| PREDICTED: uncharacterized protein LOC100784357 [Glycine max]
          Length = 337

 Score = 69.7 bits (169), Expect(3) = 9e-13
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = +3

Query: 195 IEGDKVIGCSELLKACESMGVTKSHDEAVAFARVLDEAGVILLFRDK 335
           +EG +VI  SELL+ACESMG+ +S +EA AFARVLDEAGV+LLFRDK
Sbjct: 123 MEGKEVICYSELLEACESMGIARSPEEAAAFARVLDEAGVVLLFRDK 169



 Score = 25.8 bits (55), Expect(3) = 9e-13
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +2

Query: 149 RLVNVEALKKKLGID 193
           RLVNVE+LK KLG++
Sbjct: 110 RLVNVESLKMKLGME 124



 Score = 21.9 bits (45), Expect(3) = 9e-13
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 329 R*KVYLHPDNFV 364
           R KVYLHPD  V
Sbjct: 167 RDKVYLHPDKVV 178


>ref|XP_002263126.1| PREDICTED: uncharacterized protein LOC100255381 [Vitis vinifera]
          Length = 300

 Score = 68.2 bits (165), Expect(3) = 1e-12
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +3

Query: 195 IEGDKVIGCSELLKACESMGVTKSHDEAVAFARVLDEAGVILLFRDK 335
           +EG +VI  SELL ACESMGV +S DEA AFARVLDEAG++LLFR+K
Sbjct: 89  MEGKEVICYSELLDACESMGVARSLDEAAAFARVLDEAGIVLLFRNK 135



 Score = 26.9 bits (58), Expect(3) = 1e-12
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 149 RLVNVEALKKKLGID 193
           RLVNVEALK KLG++
Sbjct: 76  RLVNVEALKMKLGME 90



 Score = 21.9 bits (45), Expect(3) = 1e-12
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 329 R*KVYLHPDNFV 364
           R KVYLHPD  V
Sbjct: 133 RNKVYLHPDKVV 144


>emb|CBI15783.3| unnamed protein product [Vitis vinifera]
          Length = 229

 Score = 68.2 bits (165), Expect(3) = 1e-12
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +3

Query: 195 IEGDKVIGCSELLKACESMGVTKSHDEAVAFARVLDEAGVILLFRDK 335
           +EG +VI  SELL ACESMGV +S DEA AFARVLDEAG++LLFR+K
Sbjct: 15  MEGKEVICYSELLDACESMGVARSLDEAAAFARVLDEAGIVLLFRNK 61



 Score = 26.9 bits (58), Expect(3) = 1e-12
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 149 RLVNVEALKKKLGID 193
           RLVNVEALK KLG++
Sbjct: 2   RLVNVEALKMKLGME 16



 Score = 21.9 bits (45), Expect(3) = 1e-12
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 329 R*KVYLHPDNFV 364
           R KVYLHPD  V
Sbjct: 59  RNKVYLHPDKVV 70


>ref|XP_003538350.1| PREDICTED: uncharacterized protein LOC100780083 [Glycine max]
          Length = 327

 Score = 68.2 bits (165), Expect(3) = 3e-12
 Identities = 33/47 (70%), Positives = 41/47 (87%)
 Frame = +3

Query: 195 IEGDKVIGCSELLKACESMGVTKSHDEAVAFARVLDEAGVILLFRDK 335
           +EG +VI  SELL+ACES+G+ +S +EA AFARVLDEAGV+LLFRDK
Sbjct: 112 MEGKEVICYSELLEACESVGIARSPEEAAAFARVLDEAGVVLLFRDK 158



 Score = 25.8 bits (55), Expect(3) = 3e-12
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +2

Query: 149 RLVNVEALKKKLGID 193
           RLVNVE+LK KLG++
Sbjct: 99  RLVNVESLKMKLGME 113



 Score = 21.9 bits (45), Expect(3) = 3e-12
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 329 R*KVYLHPDNFV 364
           R KVYLHPD  V
Sbjct: 156 RDKVYLHPDKVV 167


Top