BLASTX nr result

ID: Coptis24_contig00020576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020576
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278685.1| PREDICTED: MORC family CW-type zinc finger p...    80   2e-13
ref|XP_004167107.1| PREDICTED: LOW QUALITY PROTEIN: MORC family ...    68   9e-10
ref|XP_003523086.1| PREDICTED: MORC family CW-type zinc finger p...    64   2e-08
ref|XP_002318684.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_003601240.1| MORC family CW-type zinc finger protein [Med...    56   3e-06

>ref|XP_002278685.1| PREDICTED: MORC family CW-type zinc finger protein 3 [Vitis
           vinifera] gi|297733753|emb|CBI15000.3| unnamed protein
           product [Vitis vinifera]
          Length = 709

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 13/122 (10%)
 Frame = +3

Query: 117 MSFTEVVDLCSDDDTGEAVMQVVKEEPHLNPSVAQRKKKRKV---ENQTSTFHSTWKASQ 287
           MSF ++VDLCSDD+  E  ++ VK EP++     Q  K  ++   + Q S  H   + S+
Sbjct: 1   MSFPDIVDLCSDDEHVEVDVKPVKLEPNIIEREIQLFKCHEILQAQYQLSKTHCRTQESE 60

Query: 288 ANGGSNALNTVQAG--------SATNGSDFASNLP--PAPLCRQFWKAGTYNDAQASKVA 437
            N  SNAL+T Q+         S  + +  +S  P  PAPLCRQFWKAG Y+D   SKV 
Sbjct: 61  ENRDSNALSTAQSSTSILDQGQSPMDDTSLSSTSPICPAPLCRQFWKAGNYDDELGSKVT 120

Query: 438 LQ 443
           LQ
Sbjct: 121 LQ 122


>ref|XP_004167107.1| PREDICTED: LOW QUALITY PROTEIN: MORC family CW-type zinc finger
           protein 4-like [Cucumis sativus]
          Length = 686

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 15/125 (12%)
 Frame = +3

Query: 114 KMSFTEVVDLCSDDDTGEAVMQVVKEEPHLN-----PSVAQRKKKRKVENQTSTFHS--- 269
           +M  T++VDL SDD+ G   ++ VK EP ++     P    +K   K E+  + F S   
Sbjct: 10  RMKSTDIVDLSSDDEEG-LNLKAVKLEPEVDGGVVLPKEHTKKNTVKHEDLNTEFVSQGF 68

Query: 270 -------TWKASQANGGSNALNTVQAGSATNGSDFASNLPPAPLCRQFWKAGTYNDAQAS 428
                   W A Q++  S+ L+ V + +  +G    S L PAP+CRQFWKAG YND  AS
Sbjct: 69  DENRSPNVWSAGQSS--SSILDQVPSPADDSGLTSPSPLCPAPVCRQFWKAGNYNDGVAS 126

Query: 429 KVALQ 443
            V +Q
Sbjct: 127 TVTVQ 131


>ref|XP_003523086.1| PREDICTED: MORC family CW-type zinc finger protein 3-like [Glycine
           max]
          Length = 688

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 14/123 (11%)
 Frame = +3

Query: 117 MSFTEVVDLCSDDDTG-EAVMQVVKEEPHLNPSVAQRKKKRK---VENQTSTFHSTWKAS 284
           M  TEVV L SDD++  E   + VK E        Q  +  K    +++ S  H+T + S
Sbjct: 1   MGPTEVVYLSSDDESEKEVAFKAVKLEEDFVLDAKQYNETNKGQLAKHKRSQSHTTGQDS 60

Query: 285 QANGGSNALNTVQAGSAT----------NGSDFASNLPPAPLCRQFWKAGTYNDAQASKV 434
           + N  SN  +T  + S+            G  +AS++  APLCRQFWKAG Y+D   SKV
Sbjct: 61  EENLSSNGPSTGHSNSSVLEQGPSPVDDTGISYASSIGVAPLCRQFWKAGNYDDGLGSKV 120

Query: 435 ALQ 443
            +Q
Sbjct: 121 TVQ 123


>ref|XP_002318684.1| predicted protein [Populus trichocarpa] gi|222859357|gb|EEE96904.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
 Frame = +3

Query: 222 RKKKRKVENQTSTFHSTWKASQANGGSNALNTVQAGSAT----------NGSDFASNLPP 371
           R+K ++ E + S   S  + S+     NAL+T Q+ S            +G  FAS + P
Sbjct: 28  RRKAQQAEVRKSGTQSKRQESEETRNLNALSTGQSNSIVLEHGQPPVDDSGISFASTICP 87

Query: 372 APLCRQFWKAGTYNDAQASKVALQ 443
           APLCRQFWKAG Y+D   S+  LQ
Sbjct: 88  APLCRQFWKAGNYDDGLNSETTLQ 111


>ref|XP_003601240.1| MORC family CW-type zinc finger protein [Medicago truncatula]
           gi|355490288|gb|AES71491.1| MORC family CW-type zinc
           finger protein [Medicago truncatula]
          Length = 943

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
 Frame = +3

Query: 117 MSFTEVVDLCSDDDTGEAVMQVVKEEPHLNPSVAQRKKKRKVENQTSTFHSTWKASQANG 296
           M   EV+DL SDD++ E V  +V  +  L P   +++ +R+ +   S   +T K  + N 
Sbjct: 34  MGSVEVIDLSSDDES-EKVRGIVPVK--LEPGAVKQEHRRQAKCGKSQSRATGKDVEENF 90

Query: 297 GSNALNTVQAGSAT----------NGSDFASNLPPAPLCRQFWKAGTYNDAQASKVALQ 443
             +  +T  + S+            G  +AS L  APL RQFWKAG+Y++  AS++ ++
Sbjct: 91  SGSVPSTGHSNSSVLEQGPSPIDDTGISYASPLCAAPLSRQFWKAGSYDEGHASQIGVK 149


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