BLASTX nr result

ID: Coptis24_contig00020568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020568
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15443.3| unnamed protein product [Vitis vinifera]              208   1e-51
ref|XP_002276428.1| PREDICTED: uncharacterized protein LOC100261...   208   1e-51
ref|XP_002532648.1| conserved hypothetical protein [Ricinus comm...   185   9e-45
ref|XP_002328658.1| predicted protein [Populus trichocarpa] gi|2...   184   1e-44
ref|XP_002332599.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44

>emb|CBI15443.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score =  208 bits (529), Expect = 1e-51
 Identities = 113/186 (60%), Positives = 137/186 (73%), Gaps = 12/186 (6%)
 Frame = -1

Query: 732 RNHFSLHHNQQPLYSKTPSLSSLTRKTTPSHITTNAKKLSSRTGRFDSKNKKADSGISTT 553
           R HF L     P    T   ++ T ++  SHI   AKKLSSRTGRFDSKN++  SG +T 
Sbjct: 71  RRHFLL-----PSLPFTLITTTTTTRSRTSHIVF-AKKLSSRTGRFDSKNRR--SGTTTK 122

Query: 552 TRQEE--------EVLNFEDID----DEVDDGYFLPELPGDKPDPFEGSQWDALGFFVQY 409
             Q+E        E+ + E++     D+ DDGYFLPELPGDKPD +EG QWDALGFFVQY
Sbjct: 123 EGQQEQREEAEIKEIGSTENVGVADGDDDDDGYFLPELPGDKPDFWEGPQWDALGFFVQY 182

Query: 408 LWAFGIVFALIGCGIAVATYNEGATDFKQTPAFKESIQSRELLEEPEASDADVFEANPTE 229
           LWAFGIVFALI CGIAV TYNEGATDFK+TP ++ES+QSR+LLEEPE S++DVFE+NPTE
Sbjct: 183 LWAFGIVFALIACGIAVVTYNEGATDFKKTPVYQESVQSRDLLEEPETSNSDVFESNPTE 242

Query: 228 DAPSLD 211
           +APSL+
Sbjct: 243 EAPSLE 248


>ref|XP_002276428.1| PREDICTED: uncharacterized protein LOC100261000 [Vitis vinifera]
          Length = 206

 Score =  208 bits (529), Expect = 1e-51
 Identities = 113/186 (60%), Positives = 137/186 (73%), Gaps = 12/186 (6%)
 Frame = -1

Query: 732 RNHFSLHHNQQPLYSKTPSLSSLTRKTTPSHITTNAKKLSSRTGRFDSKNKKADSGISTT 553
           R HF L     P    T   ++ T ++  SHI   AKKLSSRTGRFDSKN++  SG +T 
Sbjct: 29  RRHFLL-----PSLPFTLITTTTTTRSRTSHIVF-AKKLSSRTGRFDSKNRR--SGTTTK 80

Query: 552 TRQEE--------EVLNFEDID----DEVDDGYFLPELPGDKPDPFEGSQWDALGFFVQY 409
             Q+E        E+ + E++     D+ DDGYFLPELPGDKPD +EG QWDALGFFVQY
Sbjct: 81  EGQQEQREEAEIKEIGSTENVGVADGDDDDDGYFLPELPGDKPDFWEGPQWDALGFFVQY 140

Query: 408 LWAFGIVFALIGCGIAVATYNEGATDFKQTPAFKESIQSRELLEEPEASDADVFEANPTE 229
           LWAFGIVFALI CGIAV TYNEGATDFK+TP ++ES+QSR+LLEEPE S++DVFE+NPTE
Sbjct: 141 LWAFGIVFALIACGIAVVTYNEGATDFKKTPVYQESVQSRDLLEEPETSNSDVFESNPTE 200

Query: 228 DAPSLD 211
           +APSL+
Sbjct: 201 EAPSLE 206


>ref|XP_002532648.1| conserved hypothetical protein [Ricinus communis]
           gi|223527608|gb|EEF29721.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 198

 Score =  185 bits (470), Expect = 9e-45
 Identities = 102/187 (54%), Positives = 131/187 (70%), Gaps = 12/187 (6%)
 Frame = -1

Query: 735 TRNHFSLHHNQQPLYSKTPSLSSLTRKTTPSHITTNAKKL--SSRTGRFDSKNKKADSGI 562
           T++H   HH  Q ++   P  +         HI  +AKKL  S+RTGRFDSKNK++    
Sbjct: 23  TKHHPYTHHRPQIVFPLAPRRAH--------HIIVSAKKLPSSARTGRFDSKNKRSSI-- 72

Query: 561 STTTRQEEEVLNFEDIDDE--------VDDGYF--LPELPGDKPDPFEGSQWDALGFFVQ 412
            TT  Q++   + E+++ +        V+D Y+  L +LP D+ + +EG QWDALGFF+Q
Sbjct: 73  -TTKDQDDNTDDNEEVNADISSSSSVDVEDNYYDILSKLPKDETEFWEGPQWDALGFFLQ 131

Query: 411 YLWAFGIVFALIGCGIAVATYNEGATDFKQTPAFKESIQSRELLEEPEASDADVFEANPT 232
           YLWAFGIVFALI CGIAVATYNEGATDFK TPA+KES+QS+ELLEEP+AS +DVFE+NPT
Sbjct: 132 YLWAFGIVFALIACGIAVATYNEGATDFKDTPAYKESVQSQELLEEPDASTSDVFESNPT 191

Query: 231 EDAPSLD 211
           E APSLD
Sbjct: 192 EIAPSLD 198


>ref|XP_002328658.1| predicted protein [Populus trichocarpa] gi|222838834|gb|EEE77185.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  184 bits (468), Expect = 1e-44
 Identities = 106/194 (54%), Positives = 131/194 (67%), Gaps = 19/194 (9%)
 Frame = -1

Query: 735 TRNHFSLHHNQQPLYSKTPSLSSLTRKTTPSH---ITTNAKKLSS--RTGRFDSKNKKAD 571
           TR+H   H   +P +     L  L R++   H   ++ + KKLSS  R G+FDSKN++  
Sbjct: 21  TRHHPYTHTTCRPQF-----LFPL-RRSPQDHLHIVSASNKKLSSVSRIGKFDSKNRR-- 72

Query: 570 SGISTTTRQEE--------------EVLNFEDIDDEVDDGYFLPELPGDKPDPFEGSQWD 433
           S  ++T  QEE              EV N      E  DGYFLPELPGD+PD +EG QWD
Sbjct: 73  SSTTSTKDQEENKRDGSGGDENVNGEVKNVSTSVGENYDGYFLPELPGDEPDFWEGPQWD 132

Query: 432 ALGFFVQYLWAFGIVFALIGCGIAVATYNEGATDFKQTPAFKESIQSRELLEEPEASDAD 253
             GFFVQY+WAFGIVFAL+ CGIAVATYN GA DFK+TPA+KESIQSR+LLEEPEAS++D
Sbjct: 133 GFGFFVQYMWAFGIVFALVACGIAVATYNGGAADFKETPAYKESIQSRDLLEEPEASNSD 192

Query: 252 VFEANPTEDAPSLD 211
           VF++NPTE APSL+
Sbjct: 193 VFDSNPTEVAPSLE 206


>ref|XP_002332599.1| predicted protein [Populus trichocarpa] gi|222834250|gb|EEE72727.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  184 bits (467), Expect = 2e-44
 Identities = 97/159 (61%), Positives = 117/159 (73%), Gaps = 16/159 (10%)
 Frame = -1

Query: 639 ITTNAKKLSS--RTGRFDSKNKKADSGISTTTRQEE--------------EVLNFEDIDD 508
           ++ + KKLSS  R G+FDSKN++  S  ++T  QEE              EV N      
Sbjct: 50  VSASNKKLSSVSRIGKFDSKNRR--SSTTSTKDQEENKRDGSGGDENVNGEVKNVSTSVG 107

Query: 507 EVDDGYFLPELPGDKPDPFEGSQWDALGFFVQYLWAFGIVFALIGCGIAVATYNEGATDF 328
           E  DGYFLPELPGD+PD +EG QWD  GFFVQY+WAFGIVFAL+ CGIAVATYN GA DF
Sbjct: 108 ENYDGYFLPELPGDEPDFWEGPQWDGFGFFVQYMWAFGIVFALVACGIAVATYNGGAADF 167

Query: 327 KQTPAFKESIQSRELLEEPEASDADVFEANPTEDAPSLD 211
           K+TPA+KESIQSR+LLEEPEAS++DVF++NPTE APSL+
Sbjct: 168 KETPAYKESIQSRDLLEEPEASNSDVFDSNPTEVAPSLE 206


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