BLASTX nr result

ID: Coptis24_contig00020567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020567
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269129.1| PREDICTED: F-box protein At5g06550 [Vitis vi...   246   2e-63
ref|XP_004136539.1| PREDICTED: F-box protein At5g06550-like [Cuc...   241   9e-62
ref|XP_004164484.1| PREDICTED: F-box protein At5g06550-like isof...   240   2e-61
ref|XP_002524104.1| transferase, transferring glycosyl groups, p...   237   2e-60
ref|XP_003554495.1| PREDICTED: F-box protein At5g06550-like [Gly...   232   5e-59

>ref|XP_002269129.1| PREDICTED: F-box protein At5g06550 [Vitis vinifera]
           gi|147840343|emb|CAN75104.1| hypothetical protein
           VITISV_019348 [Vitis vinifera]
          Length = 507

 Score =  246 bits (629), Expect = 2e-63
 Identities = 118/151 (78%), Positives = 131/151 (86%), Gaps = 1/151 (0%)
 Frame = -3

Query: 654 GVHPSPDGAEVACPVSIIEWFMNFYGATKTWKQRPVECVCKAGEVIFVPNGWWHLVINLE 475
           GVHPSPDGAEVACPVSI+EWFMNFYGATK WK++P+ECVCKAGEVIFVPNGWWHLVINLE
Sbjct: 357 GVHPSPDGAEVACPVSIVEWFMNFYGATKKWKKKPIECVCKAGEVIFVPNGWWHLVINLE 416

Query: 474 ESIAITQNYVSRSNLLNVLDFLKKPNASELVSGTRDRVNLYDKFRSAIEASFPGTI-SXX 298
           +SIAITQN+VSR NLLNVLDFLKKPNAS LVSGTRDRVNLY+KFR AIEA+FPGTI    
Sbjct: 417 DSIAITQNFVSRRNLLNVLDFLKKPNASMLVSGTRDRVNLYEKFRKAIEATFPGTIDQLM 476

Query: 297 XXXXXXXXXXXKVSYWETVSDAKVGAFKFSF 205
                      K+++WE+VSD+ VGAFKFSF
Sbjct: 477 SKAEEKKSQPKKLTFWESVSDSNVGAFKFSF 507


>ref|XP_004136539.1| PREDICTED: F-box protein At5g06550-like [Cucumis sativus]
          Length = 512

 Score =  241 bits (615), Expect = 9e-62
 Identities = 114/151 (75%), Positives = 130/151 (86%), Gaps = 1/151 (0%)
 Frame = -3

Query: 654 GVHPSPDGAEVACPVSIIEWFMNFYGATKTWKQRPVECVCKAGEVIFVPNGWWHLVINLE 475
           GVHPSPDGAEVACPVSIIEWFMNFY ATKTW+++P+EC+CKAGEVIFVPNGWWHLVINLE
Sbjct: 362 GVHPSPDGAEVACPVSIIEWFMNFYAATKTWEKKPIECICKAGEVIFVPNGWWHLVINLE 421

Query: 474 ESIAITQNYVSRSNLLNVLDFLKKPNASELVSGTRDRVNLYDKFRSAIEASFPGTI-SXX 298
           ESIAITQNYVSR NLLNVLDFLK+PNAS LVSGT+DRVNLYDKF++AI+AS PGTI    
Sbjct: 422 ESIAITQNYVSRRNLLNVLDFLKRPNASMLVSGTKDRVNLYDKFKNAIDASLPGTIDQLA 481

Query: 297 XXXXXXXXXXXKVSYWETVSDAKVGAFKFSF 205
                      K+S+W++V+D+  GAFKFSF
Sbjct: 482 RKAEEKAAEQKKLSFWDSVADSNAGAFKFSF 512


>ref|XP_004164484.1| PREDICTED: F-box protein At5g06550-like isoform 1 [Cucumis sativus]
          Length = 512

 Score =  240 bits (612), Expect = 2e-61
 Identities = 113/151 (74%), Positives = 130/151 (86%), Gaps = 1/151 (0%)
 Frame = -3

Query: 654 GVHPSPDGAEVACPVSIIEWFMNFYGATKTWKQRPVECVCKAGEVIFVPNGWWHLVINLE 475
           GVHPSPDGAEVACPVSIIEWFMNFY ATKTW+++P+EC+CKAGEVIFVPNGWWHLVINLE
Sbjct: 362 GVHPSPDGAEVACPVSIIEWFMNFYAATKTWEKKPIECICKAGEVIFVPNGWWHLVINLE 421

Query: 474 ESIAITQNYVSRSNLLNVLDFLKKPNASELVSGTRDRVNLYDKFRSAIEASFPGTI-SXX 298
           ESIAITQNYVSR NLLNVLDFL++PNAS LVSGT+DRVNLYDKF++AI+AS PGTI    
Sbjct: 422 ESIAITQNYVSRRNLLNVLDFLRRPNASMLVSGTKDRVNLYDKFKNAIDASLPGTIDQLA 481

Query: 297 XXXXXXXXXXXKVSYWETVSDAKVGAFKFSF 205
                      K+S+W++V+D+  GAFKFSF
Sbjct: 482 RKAEEKAAEQKKLSFWDSVADSNAGAFKFSF 512


>ref|XP_002524104.1| transferase, transferring glycosyl groups, putative [Ricinus
           communis] gi|223536672|gb|EEF38314.1| transferase,
           transferring glycosyl groups, putative [Ricinus
           communis]
          Length = 810

 Score =  237 bits (604), Expect = 2e-60
 Identities = 113/148 (76%), Positives = 127/148 (85%), Gaps = 1/148 (0%)
 Frame = -3

Query: 654 GVHPSPDGAEVACPVSIIEWFMNFYGATKTWKQRPVECVCKAGEVIFVPNGWWHLVINLE 475
           GVHPSPDG EVACPVSIIEWFMNFY ATK WK+RP+ECVCKAGEVIFVPNGWWHLVINLE
Sbjct: 365 GVHPSPDGTEVACPVSIIEWFMNFYDATKDWKKRPIECVCKAGEVIFVPNGWWHLVINLE 424

Query: 474 ESIAITQNYVSRSNLLNVLDFLKKPNASELVSGTRDRVNLYDKFRSAIEASFPGTI-SXX 298
           ES+AITQNYVSRSNLLNVL+FLK+PNASELVSGTRDRVNL+DKF++AIEA FPGTI    
Sbjct: 425 ESVAITQNYVSRSNLLNVLEFLKRPNASELVSGTRDRVNLHDKFKNAIEARFPGTIDDLV 484

Query: 297 XXXXXXXXXXXKVSYWETVSDAKVGAFK 214
                      K+S+W++V+D+  GAFK
Sbjct: 485 QKAEEKKAQQKKLSFWDSVTDSHAGAFK 512


>ref|XP_003554495.1| PREDICTED: F-box protein At5g06550-like [Glycine max]
          Length = 507

 Score =  232 bits (591), Expect = 5e-59
 Identities = 111/151 (73%), Positives = 125/151 (82%), Gaps = 1/151 (0%)
 Frame = -3

Query: 654 GVHPSPDGAEVACPVSIIEWFMNFYGATKTWKQRPVECVCKAGEVIFVPNGWWHLVINLE 475
           GVHPSPDGA+VA PVSIIEWFMNFYGATK W ++P+ECVCKAGEVIFVP+GWWHLVINLE
Sbjct: 357 GVHPSPDGADVASPVSIIEWFMNFYGATKNWNKKPIECVCKAGEVIFVPSGWWHLVINLE 416

Query: 474 ESIAITQNYVSRSNLLNVLDFLKKPNASELVSGTRDRVNLYDKFRSAIEASFPGTI-SXX 298
           ESIAITQNYVSR NL+NVLDFLK PNAS LVSGTRDR+NLYDKF++AIEA FPG I    
Sbjct: 417 ESIAITQNYVSRRNLINVLDFLKSPNASTLVSGTRDRLNLYDKFKNAIEAYFPGEIDELT 476

Query: 297 XXXXXXXXXXXKVSYWETVSDAKVGAFKFSF 205
                      K+S+W++V+D   GAFKFSF
Sbjct: 477 RKEEERKIQQRKLSFWDSVADTNAGAFKFSF 507


Top