BLASTX nr result
ID: Coptis24_contig00020565
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020565 (238 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32017.3| unnamed protein product [Vitis vinifera] 92 4e-17 ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot... 92 4e-17 gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca] 90 2e-16 ref|XP_002312786.1| porin/voltage-dependent anion-selective chan... 90 2e-16 gb|AAA96275.1| voltage-dependent anion channel protein [Spinacia... 88 8e-16 >emb|CBI32017.3| unnamed protein product [Vitis vinifera] Length = 240 Score = 92.0 bits (227), Expect = 4e-17 Identities = 43/76 (56%), Positives = 57/76 (75%) Frame = +2 Query: 2 APGMKTVFDFFYPDRESGKMELQYQTEFVGISSSIGLIANPVVGFSCMFGEDDLSVGTNV 181 APG+KT+F F PD+ SGK+ELQY E+ GIS+SIGL ANP+V FS + G + LS+GT++ Sbjct: 87 APGLKTIFSFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDL 146 Query: 182 SINTATLKLTECKFGL 229 S +TAT T+C GL Sbjct: 147 SFDTATGNFTKCNAGL 162 >ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa isoform 1 [Vitis vinifera] Length = 276 Score = 92.0 bits (227), Expect = 4e-17 Identities = 43/76 (56%), Positives = 57/76 (75%) Frame = +2 Query: 2 APGMKTVFDFFYPDRESGKMELQYQTEFVGISSSIGLIANPVVGFSCMFGEDDLSVGTNV 181 APG+KT+F F PD+ SGK+ELQY E+ GIS+SIGL ANP+V FS + G + LS+GT++ Sbjct: 87 APGLKTIFSFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDL 146 Query: 182 SINTATLKLTECKFGL 229 S +TAT T+C GL Sbjct: 147 SFDTATGNFTKCNAGL 162 >gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca] Length = 276 Score = 90.1 bits (222), Expect = 2e-16 Identities = 42/76 (55%), Positives = 57/76 (75%) Frame = +2 Query: 2 APGMKTVFDFFYPDRESGKMELQYQTEFVGISSSIGLIANPVVGFSCMFGEDDLSVGTNV 181 APG+K +F F PD+ SGK+ELQYQ E+ GIS+SIGL ANP+V FS + G + LS+GT++ Sbjct: 87 APGLKAIFSFIVPDQRSGKVELQYQHEYAGISTSIGLTANPIVNFSGVVGNNLLSLGTDL 146 Query: 182 SINTATLKLTECKFGL 229 S +TA+ T+C GL Sbjct: 147 SFDTASGNFTKCNAGL 162 >ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus trichocarpa] gi|118481103|gb|ABK92505.1| unknown [Populus trichocarpa] gi|222852606|gb|EEE90153.1| porin/voltage-dependent anion-selective channel protein [Populus trichocarpa] Length = 276 Score = 89.7 bits (221), Expect = 2e-16 Identities = 41/76 (53%), Positives = 58/76 (76%) Frame = +2 Query: 2 APGMKTVFDFFYPDRESGKMELQYQTEFVGISSSIGLIANPVVGFSCMFGEDDLSVGTNV 181 APG+KT+F F PD+ SGK+ELQYQ E+ GIS+S+GL ANP+V FS + G + +++GT++ Sbjct: 87 APGLKTIFSFKVPDQRSGKVELQYQHEYAGISTSLGLTANPIVNFSGVVGSNVVALGTDL 146 Query: 182 SINTATLKLTECKFGL 229 S +TAT T+C GL Sbjct: 147 SFDTATGNFTKCNAGL 162 >gb|AAA96275.1| voltage-dependent anion channel protein [Spinacia oleracea] Length = 276 Score = 87.8 bits (216), Expect = 8e-16 Identities = 40/76 (52%), Positives = 56/76 (73%) Frame = +2 Query: 2 APGMKTVFDFFYPDRESGKMELQYQTEFVGISSSIGLIANPVVGFSCMFGEDDLSVGTNV 181 APG+K +F F PD+ SGK+ELQY E+ GIS+S+GL ANP+V FS +FG L++GT++ Sbjct: 87 APGLKAIFSFRVPDQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDL 146 Query: 182 SINTATLKLTECKFGL 229 S +TA+ T+C GL Sbjct: 147 SFDTASGNFTKCNAGL 162