BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020563
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   141   5e-49
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]   127   1e-44
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-44
emb|CBI37820.3| unnamed protein product [Vitis vinifera]              127   1e-44
ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-44

>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  141 bits (356), Expect(2) = 5e-49
 Identities = 68/106 (64%), Positives = 80/106 (75%)
 Frame = +3

Query: 3   LVHAFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAG 182
           LVHA+NTLIAGYG  GRVDEA++LFD+IP     G+     F RNVVSWN+MIMCYVKAG
Sbjct: 241 LVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAG 300

Query: 183 DLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNLLTNCQIP 320
           D++SA+KLF++M +RD  SWNTMI GY HV DME ASNL      P
Sbjct: 301 DVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKMPSP 346



 Score = 78.2 bits (191), Expect(2) = 5e-49
 Identities = 35/59 (59%), Positives = 47/59 (79%)
 Frame = +2

Query: 302 NKLPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEEAV 478
           +K+P PD  + N M+SGYAQ G+L +A DFF +MP+K+LVSWNS+IAGYE+N DY  A+
Sbjct: 341 HKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAI 399



 Score = 76.6 bits (187), Expect(2) = 4e-23
 Identities = 37/86 (43%), Positives = 55/86 (63%)
 Frame = +3

Query: 6   VHAFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGD 185
           +++ N  I+ +  +GR++EAR LFD++               RN V+WNSMI  YVK G+
Sbjct: 47  LYSSNKKISHFTRTGRINEARALFDKLER-------------RNTVTWNSMISGYVKRGE 93

Query: 186 LVSAQKLFNEMDERDIISWNTMIGGY 263
           +  A+KLF+EM ERD++SWN +I GY
Sbjct: 94  MTKARKLFDEMPERDVVSWNLIISGY 119



 Score = 56.2 bits (134), Expect(2) = 4e-23
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +2

Query: 302 NKLPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEEAVE 481
           +K+P+    + N+M+SGYA+ G +  A   F  MPEK+ VSWN+M++G+ QN D   A+E
Sbjct: 136 DKMPERCCVSWNTMISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIE 195



 Score = 67.0 bits (162), Expect(2) = 2e-13
 Identities = 33/97 (34%), Positives = 57/97 (58%)
 Frame = +3

Query: 12  AFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLV 191
           ++NT+I+GY  +GR+DEA  LF+ +P              +N VSWN+M+  +++ GD+V
Sbjct: 145 SWNTMISGYAKNGRMDEALGLFNTMPE-------------KNSVSWNAMVSGFLQNGDVV 191

Query: 192 SAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNLL 302
            A + F  M ERD+ S + ++ G    S+++ A  +L
Sbjct: 192 RAIEFFKRMPERDVTSLSALVSGLIQNSELDQAERIL 228



 Score = 33.5 bits (75), Expect(2) = 2e-13
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 13/56 (23%)
 Frame = +2

Query: 335 NSMMSGYAQIGNLGIARDFFYKMP-------------EKSLVSWNSMIAGYEQNRD 463
           N++++GY Q G +  A++ F K+P             E+++VSWN+MI  Y +  D
Sbjct: 246 NTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGD 301



 Score = 47.4 bits (111), Expect(2) = 3e-10
 Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +2

Query: 293 KSVNKLPDPDAQTSNSMMSGYAQIGN---LGIARDFFYKMPEKSLVSWNSMIAGYEQNRD 463
           K  +++P+ D  + N ++SGY        +   R+ F KMPE+  VSWN+MI+GY +N  
Sbjct: 99  KLFDEMPERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGR 158

Query: 464 YEEAV 478
            +EA+
Sbjct: 159 MDEAL 163



 Score = 42.0 bits (97), Expect(2) = 3e-10
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +3

Query: 135 NVVSWNSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNL 299
           N+ S N  I  + + G +  A+ LF++++ R+ ++WN+MI GY    +M  A  L
Sbjct: 46  NLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKL 100



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = +3

Query: 6   VHAFNTLIAGY-GASGR--VDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVK 176
           V ++N +I+GY    G+  ++E R+LFD++P         E C     VSWN+MI  Y K
Sbjct: 109 VVSWNLIISGYVSCRGKRFIEEGRNLFDKMP---------ERC----CVSWNTMISGYAK 155

Query: 177 AGDLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAA 290
            G +  A  LFN M E++ +SWN M+ G+    D+  A
Sbjct: 156 NGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRA 193


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score =  127 bits (319), Expect(2) = 1e-44
 Identities = 63/96 (65%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   LVHAFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAG 182
           LVHA+N L+AGYG +GRVD+AR LFD+IP     G+K+   F RNVVSWNSMIMCYVKA 
Sbjct: 260 LVHAYNILLAGYGQNGRVDKARQLFDQIPFYD-GGQKDGGRFERNVVSWNSMIMCYVKAR 318

Query: 183 DLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAA 290
           D+ SA+ LF++M ERD ISWNTMI GY  +SDME A
Sbjct: 319 DIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEA 354



 Score = 77.8 bits (190), Expect(2) = 1e-44
 Identities = 36/59 (61%), Positives = 46/59 (77%)
 Frame = +2

Query: 305 KLPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEEAVE 481
           ++P+PD  T NSM+SG+AQ GNL +AR  F  +P+K+LVSWNSMIAGYE N DY+ A E
Sbjct: 360 EMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATE 418



 Score = 72.8 bits (177), Expect(2) = 4e-22
 Identities = 34/73 (46%), Positives = 48/73 (65%)
 Frame = +3

Query: 45  SGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMDE 224
           +GR++EAR LFD +P              RN+V+WNSMI  YV+  ++  A+KLF+EM +
Sbjct: 80  NGRINEARALFDAMPQ-------------RNIVTWNSMITGYVRRREMAKARKLFDEMPD 126

Query: 225 RDIISWNTMIGGY 263
           RD++SWN MI GY
Sbjct: 127 RDVVSWNLMISGY 139



 Score = 56.6 bits (135), Expect(2) = 4e-22
 Identities = 24/60 (40%), Positives = 40/60 (66%)
 Frame = +2

Query: 302 NKLPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEEAVE 481
           +++P+ D  + N+M+SGY + G +  A   F  M E+++VSWN+M+ G+ QN D E A+E
Sbjct: 155 DEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIE 214



 Score = 63.5 bits (153), Expect(2) = 2e-13
 Identities = 34/97 (35%), Positives = 54/97 (55%)
 Frame = +3

Query: 12  AFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLV 191
           ++NT+I+GY  SGR+DEA  LFD +               RNVVSWN+M+  +++ GD+ 
Sbjct: 164 SWNTMISGYTRSGRMDEALQLFDSMQE-------------RNVVSWNAMVTGFLQNGDVE 210

Query: 192 SAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNLL 302
            A + F  M ERD  S + ++ G     +++ A  +L
Sbjct: 211 RAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRIL 247



 Score = 36.6 bits (83), Expect(2) = 2e-13
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 12/55 (21%)
 Frame = +2

Query: 335 NSMMSGYAQIGNLGIARDFFYKMP------------EKSLVSWNSMIAGYEQNRD 463
           N +++GY Q G +  AR  F ++P            E+++VSWNSMI  Y + RD
Sbjct: 265 NILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARD 319



 Score = 48.5 bits (114), Expect(2) = 9e-10
 Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +2

Query: 293 KSVNKLPDPDAQTSNSMMSGYAQIGNLGI--ARDFFYKMPEKSLVSWNSMIAGYEQNRDY 466
           K  +++PD D  + N M+SGY       +   R  F +MPE+  VSWN+MI+GY ++   
Sbjct: 119 KLFDEMPDRDVVSWNLMISGYVSCRGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRM 178

Query: 467 EEAVE 481
           +EA++
Sbjct: 179 DEALQ 183



 Score = 39.3 bits (90), Expect(2) = 9e-10
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = +3

Query: 150 NSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNL 299
           N  I   ++ G +  A+ LF+ M +R+I++WN+MI GY    +M  A  L
Sbjct: 71  NKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKL 120



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = +3

Query: 6   VHAFNTLIAGY-GASGR-VDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKA 179
           V ++N +I+GY    GR V+E R LFD +P        E +C     VSWN+MI  Y ++
Sbjct: 129 VVSWNLMISGYVSCRGRWVEEGRHLFDEMP--------ERDC-----VSWNTMISGYTRS 175

Query: 180 GDLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAA 290
           G +  A +LF+ M ER+++SWN M+ G+    D+E A
Sbjct: 176 GRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERA 212



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
 Frame = +3

Query: 15  FNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGD--L 188
           +N++I GY     + +AR LFD +P              R+VVSWN MI  YV      +
Sbjct: 101 WNSMITGYVRRREMAKARKLFDEMPD-------------RDVVSWNLMISGYVSCRGRWV 147

Query: 189 VSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNLLTNCQ 314
              + LF+EM ERD +SWNTMI GY     M+ A  L  + Q
Sbjct: 148 EEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQ 189


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score =  127 bits (319), Expect(2) = 1e-44
 Identities = 63/96 (65%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   LVHAFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAG 182
           LVHA+N L+AGYG +GRVD+AR LFD+IP     G+K+   F RNVVSWNSMIMCYVKA 
Sbjct: 260 LVHAYNILLAGYGQNGRVDKARQLFDQIPFYD-GGQKDGGRFERNVVSWNSMIMCYVKAR 318

Query: 183 DLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAA 290
           D+ SA+ LF++M ERD ISWNTMI GY  +SDME A
Sbjct: 319 DIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEA 354



 Score = 77.8 bits (190), Expect(2) = 1e-44
 Identities = 36/59 (61%), Positives = 46/59 (77%)
 Frame = +2

Query: 305 KLPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEEAVE 481
           ++P+PD  T NSM+SG+AQ GNL +AR  F  +P+K+LVSWNSMIAGYE N DY+ A E
Sbjct: 360 EMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATE 418



 Score = 72.8 bits (177), Expect(2) = 4e-22
 Identities = 34/73 (46%), Positives = 48/73 (65%)
 Frame = +3

Query: 45  SGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMDE 224
           +GR++EAR LFD +P              RN+V+WNSMI  YV+  ++  A+KLF+EM +
Sbjct: 80  NGRINEARALFDAMPQ-------------RNIVTWNSMITGYVRRREMAKARKLFDEMPD 126

Query: 225 RDIISWNTMIGGY 263
           RD++SWN MI GY
Sbjct: 127 RDVVSWNLMISGY 139



 Score = 56.6 bits (135), Expect(2) = 4e-22
 Identities = 24/60 (40%), Positives = 40/60 (66%)
 Frame = +2

Query: 302 NKLPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEEAVE 481
           +++P+ D  + N+M+SGY + G +  A   F  M E+++VSWN+M+ G+ QN D E A+E
Sbjct: 155 DEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIE 214



 Score = 63.5 bits (153), Expect(2) = 2e-13
 Identities = 34/97 (35%), Positives = 54/97 (55%)
 Frame = +3

Query: 12  AFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLV 191
           ++NT+I+GY  SGR+DEA  LFD +               RNVVSWN+M+  +++ GD+ 
Sbjct: 164 SWNTMISGYTRSGRMDEALQLFDSMQE-------------RNVVSWNAMVTGFLQNGDVE 210

Query: 192 SAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNLL 302
            A + F  M ERD  S + ++ G     +++ A  +L
Sbjct: 211 RAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRIL 247



 Score = 36.6 bits (83), Expect(2) = 2e-13
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 12/55 (21%)
 Frame = +2

Query: 335 NSMMSGYAQIGNLGIARDFFYKMP------------EKSLVSWNSMIAGYEQNRD 463
           N +++GY Q G +  AR  F ++P            E+++VSWNSMI  Y + RD
Sbjct: 265 NILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARD 319



 Score = 48.5 bits (114), Expect(2) = 9e-10
 Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +2

Query: 293 KSVNKLPDPDAQTSNSMMSGYAQIGNLGI--ARDFFYKMPEKSLVSWNSMIAGYEQNRDY 466
           K  +++PD D  + N M+SGY       +   R  F +MPE+  VSWN+MI+GY ++   
Sbjct: 119 KLFDEMPDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRM 178

Query: 467 EEAVE 481
           +EA++
Sbjct: 179 DEALQ 183



 Score = 39.3 bits (90), Expect(2) = 9e-10
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = +3

Query: 150 NSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNL 299
           N  I   ++ G +  A+ LF+ M +R+I++WN+MI GY    +M  A  L
Sbjct: 71  NKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKL 120



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = +3

Query: 6   VHAFNTLIAGY-GASGR-VDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKA 179
           V ++N +I+GY    GR V+E R LFD +P        E +C     VSWN+MI  Y ++
Sbjct: 129 VVSWNLMISGYVSCQGRWVEEGRHLFDEMP--------ERDC-----VSWNTMISGYTRS 175

Query: 180 GDLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAA 290
           G +  A +LF+ M ER+++SWN M+ G+    D+E A
Sbjct: 176 GRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERA 212



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
 Frame = +3

Query: 15  FNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGD--L 188
           +N++I GY     + +AR LFD +P              R+VVSWN MI  YV      +
Sbjct: 101 WNSMITGYVRRREMAKARKLFDEMPD-------------RDVVSWNLMISGYVSCQGRWV 147

Query: 189 VSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNLLTNCQ 314
              + LF+EM ERD +SWNTMI GY     M+ A  L  + Q
Sbjct: 148 EEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQ 189


>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  127 bits (319), Expect(2) = 1e-44
 Identities = 63/96 (65%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   LVHAFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAG 182
           LVHA+N L+AGYG +GRVD+AR LFD+IP     G+K+   F RNVVSWNSMIMCYVKA 
Sbjct: 83  LVHAYNILLAGYGQNGRVDKARQLFDQIPFYD-GGQKDGGRFERNVVSWNSMIMCYVKAR 141

Query: 183 DLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAA 290
           D+ SA+ LF++M ERD ISWNTMI GY  +SDME A
Sbjct: 142 DIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEA 177



 Score = 77.8 bits (190), Expect(2) = 1e-44
 Identities = 36/59 (61%), Positives = 46/59 (77%)
 Frame = +2

Query: 305 KLPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEEAVE 481
           ++P+PD  T NSM+SG+AQ GNL +AR  F  +P+K+LVSWNSMIAGYE N DY+ A E
Sbjct: 183 EMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATE 241



 Score = 46.2 bits (108), Expect(2) = 3e-08
 Identities = 26/83 (31%), Positives = 42/83 (50%)
 Frame = +3

Query: 54  VDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMDERDI 233
           +DEA  LFD +               RNVVSWN+M+  +++ GD+  A + F  M ERD 
Sbjct: 1   MDEALQLFDSMQE-------------RNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDS 47

Query: 234 ISWNTMIGGYAHVSDMEAASNLL 302
            S + ++ G     +++ A  +L
Sbjct: 48  ASLSALVAGLIQNGELDEAKRIL 70



 Score = 36.6 bits (83), Expect(2) = 3e-08
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 12/55 (21%)
 Frame = +2

Query: 335 NSMMSGYAQIGNLGIARDFFYKMP------------EKSLVSWNSMIAGYEQNRD 463
           N +++GY Q G +  AR  F ++P            E+++VSWNSMI  Y + RD
Sbjct: 88  NILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARD 142


>ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  129 bits (324), Expect(2) = 2e-44
 Identities = 65/106 (61%), Positives = 77/106 (72%)
 Frame = +3

Query: 3   LVHAFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAG 182
           LVHA+NTLIAGYG  G V+EAR LFD IP     G + +  F RNVVSWNSM+MCYVKAG
Sbjct: 230 LVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAG 289

Query: 183 DLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNLLTNCQIP 320
           D+VSA++LF+ M E+D  SWNTMI GY  +S+ME AS L     IP
Sbjct: 290 DIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIP 335



 Score = 74.7 bits (182), Expect(2) = 2e-44
 Identities = 32/63 (50%), Positives = 49/63 (77%)
 Frame = +2

Query: 293 KSVNKLPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEE 472
           K   ++P PD  + N ++SG+AQ G+L +A+DFF +MP K+L+SWNS+IAGYE+N DY+ 
Sbjct: 327 KLFREMPIPDVLSWNLIVSGFAQKGDLNLAKDFFERMPLKNLISWNSIIAGYEKNEDYKG 386

Query: 473 AVE 481
           A++
Sbjct: 387 AIQ 389



 Score = 60.8 bits (146), Expect(2) = 2e-15
 Identities = 32/82 (39%), Positives = 46/82 (56%)
 Frame = +3

Query: 18  NTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLVSA 197
           N  I+    SGR+ EAR LFD +               R+ V+WNSMI  YV   ++  A
Sbjct: 43  NKKISNLIRSGRLSEARALFDSMKH-------------RDTVTWNSMITGYVHRREIARA 89

Query: 198 QKLFNEMDERDIISWNTMIGGY 263
           ++LF+EM  RD++SWN ++ GY
Sbjct: 90  RQLFDEMPRRDVVSWNLIVSGY 111



 Score = 45.8 bits (107), Expect(2) = 2e-15
 Identities = 22/58 (37%), Positives = 36/58 (62%)
 Frame = +2

Query: 308 LPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEEAVE 481
           +P  D  + N+++SGYA+ G +  A   F  MPE++ VS N++I G+  N D + AV+
Sbjct: 130 MPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGDVDSAVD 187



 Score = 55.5 bits (132), Expect(2) = 3e-13
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
 Frame = +3

Query: 15  FNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGD--- 185
           +N++I GY     +  AR LFD +P              R+VVSWN ++  Y        
Sbjct: 73  WNSMITGYVHRREIARARQLFDEMPR-------------RDVVSWNLIVSGYFSCRGSRF 119

Query: 186 LVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNL 299
           +   ++LF  M +RD +SWNT+I GYA    M+ A  L
Sbjct: 120 VEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKL 157



 Score = 44.3 bits (103), Expect(2) = 3e-13
 Identities = 22/67 (32%), Positives = 41/67 (61%)
 Frame = +2

Query: 275 RYGSSLKSVNKLPDPDAQTSNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQ 454
           R   +LK  N +P+ +A +SN++++G+   G++  A DFF  MPE    S +++I+G  +
Sbjct: 150 RMDQALKLFNAMPERNAVSSNALITGFLLNGDVDSAVDFFRTMPEHYSTSLSALISGLVR 209

Query: 455 NRDYEEA 475
           N + + A
Sbjct: 210 NGELDMA 216



 Score = 46.2 bits (108), Expect(2) = 1e-09
 Identities = 22/47 (46%), Positives = 31/47 (65%)
 Frame = +2

Query: 335 NSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNRDYEEA 475
           NSMM  Y + G++  AR+ F +M E+   SWN+MI+GY Q  + EEA
Sbjct: 279 NSMMMCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEA 325



 Score = 41.2 bits (95), Expect(2) = 1e-09
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 34/130 (26%)
 Frame = +3

Query: 12  AFNTLIAGYGASGRVDEARDLFDRIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLV 191
           ++NT+I+GY  +GR+D+A  LF+ +P              RN VS N++I  ++  GD+ 
Sbjct: 137 SWNTVISGYAKNGRMDQALKLFNAMPE-------------RNAVSSNALITGFLLNGDVD 183

Query: 192 SAQKLFNEMDER---------------------------------DII-SWNTMIGGYAH 269
           SA   F  M E                                  D++ ++NT+I GY  
Sbjct: 184 SAVDFFRTMPEHYSTSLSALISGLVRNGELDMAAGILCECGNGDDDLVHAYNTLIAGYGQ 243

Query: 270 VSDMEAASNL 299
              +E A  L
Sbjct: 244 RGHVEEARRL 253



 Score = 42.7 bits (99), Expect(2) = 2e-07
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +3

Query: 150 NSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMIGGYAHVSDMEAASNL 299
           N  I   +++G L  A+ LF+ M  RD ++WN+MI GY H  ++  A  L
Sbjct: 43  NKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQL 92



 Score = 37.4 bits (85), Expect(2) = 2e-07
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = +2

Query: 302 NKLPDPDAQTSNSMMSGYAQIGNLGIA---RDFFYKMPEKSLVSWNSMIAGYEQNRDYEE 472
           +++P  D  + N ++SGY            R  F  MP++  VSWN++I+GY +N   ++
Sbjct: 94  DEMPRRDVVSWNLIVSGYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQ 153

Query: 473 AVE 481
           A++
Sbjct: 154 ALK 156