BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020556
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein lig...    62   6e-11
ref|XP_002321798.1| predicted protein [Populus trichocarpa] gi|2...    49   5e-07
ref|XP_002332131.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus] gi|449527759|ref|XP_004170877.1| PREDICTED:
           putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus]
          Length = 863

 Score = 62.0 bits (149), Expect(2) = 6e-11
 Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 6/58 (10%)
 Frame = -2

Query: 367 MASLQQLLSEEGFE------RRKKTHPVWKTRITPDKSVALPIYICHDRRSFDFSKQK 212
           MASLQ+LL+ EGFE       RK + P  ++R  PD SV LPIYICHD+++ D SK+K
Sbjct: 1   MASLQELLTREGFEGSNYPSTRKLSRPKGRSRTAPDDSVTLPIYICHDKKTIDSSKKK 58



 Score = 30.0 bits (66), Expect(2) = 6e-11
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -1

Query: 119 TSIFSSVKGTSLRAEKILVSRNELEIDEVAVKAVISILS 3
           +S++SS +  S+       S  E  IDE+A++AV+SILS
Sbjct: 68  SSVYSSKRVGSVSETLPCKSMEEPAIDEIAIRAVVSILS 106


>ref|XP_002321798.1| predicted protein [Populus trichocarpa] gi|222868794|gb|EEF05925.1|
           predicted protein [Populus trichocarpa]
          Length = 961

 Score = 49.3 bits (116), Expect(2) = 5e-07
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
 Frame = -2

Query: 367 MASLQQLLSEEGFERRK--KTHPVWKTR---ITPDKSVALPIYICHDRRSFDFSKQ---K 212
           MASL QLL+EEGFE R   +     K R   I P++SV LPI++CHD++    SK+   K
Sbjct: 1   MASLNQLLAEEGFEHRSFLRNRAQVKPRDRLIRPEESVILPIHVCHDQKRPHSSKKKTDK 60

Query: 211 SVSRQGS 191
           + +R+GS
Sbjct: 61  ASTRKGS 67



 Score = 29.3 bits (64), Expect(2) = 5e-07
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = -1

Query: 119 TSIFSSVK---GTSLRAEKILVSRNELEIDEVAVKAVISILS 3
           +SIFSS +    T     K L+   +  IDE+A++AV+SILS
Sbjct: 67  SSIFSSRRVSSDTERLQSKSLLRGEDPAIDEIAIRAVVSILS 108


>ref|XP_002332131.1| predicted protein [Populus trichocarpa] gi|222875181|gb|EEF12312.1|
           predicted protein [Populus trichocarpa]
          Length = 980

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
 Frame = -2

Query: 367 MASLQQLLSEEGFERRKKTHPVWKTRIT-PDKSVALPIYICHDRRSFDFSKQKS---VSR 200
           MASL Q+LSEEGFE RK      + R+T P++SV LPI+ICHD++ F   KQK+    +R
Sbjct: 1   MASLHQMLSEEGFEHRKFLRS--RDRLTRPEESVILPIHICHDQKRFQSPKQKTDMGSTR 58

Query: 199 QGS 191
           +GS
Sbjct: 59  KGS 61