BLASTX nr result

ID: Coptis24_contig00020553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020553
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134667.1| PREDICTED: uncharacterized protein LOC101216...   231   1e-58
ref|NP_001235791.1| uncharacterized protein LOC100527162 [Glycin...   228   8e-58
ref|XP_002266892.1| PREDICTED: uncharacterized protein LOC100253...   228   1e-57
gb|AAK44094.2|AF370279_1 unknown protein [Arabidopsis thaliana]       226   4e-57
ref|NP_564317.1| uncharacterized protein [Arabidopsis thaliana] ...   226   4e-57

>ref|XP_004134667.1| PREDICTED: uncharacterized protein LOC101216458 [Cucumis sativus]
           gi|449479238|ref|XP_004155545.1| PREDICTED:
           uncharacterized protein LOC101228620 [Cucumis sativus]
          Length = 193

 Score =  231 bits (590), Expect = 1e-58
 Identities = 117/157 (74%), Positives = 130/157 (82%), Gaps = 3/157 (1%)
 Frame = -2

Query: 659 SLSKQPLPHFSKLKPTKTM---QSSTSTGVGGVDPTMKLLFVEMGVGYDQHGQDITVAAM 489
           SL++  +    K+    +M   Q   S  V    P MKLLFVEMGVGYDQHGQD+T AAM
Sbjct: 37  SLTRPRISRLIKVTAVSSMEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAM 96

Query: 488 RACKDAISSNSIPAFRRGSIPGVSFEEMKLQIKLGVPRAVQQSLDIDRVKSVFPYGKILN 309
           RAC+DAISSNSIPAFRRGSIPGVSF EMKLQIKLGVP ++QQSLD+++VKSVFPYGKILN
Sbjct: 97  RACRDAISSNSIPAFRRGSIPGVSFGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILN 156

Query: 308 VDVVDGGLICSSGVQVEEMGDKNDDCYIVNAAVYVGY 198
           V+VVDGGLICSSGV VEEMGDKNDDCYIVNAAVYVGY
Sbjct: 157 VEVVDGGLICSSGVHVEEMGDKNDDCYIVNAAVYVGY 193


>ref|NP_001235791.1| uncharacterized protein LOC100527162 [Glycine max]
           gi|255631690|gb|ACU16212.1| unknown [Glycine max]
          Length = 188

 Score =  228 bits (582), Expect = 8e-58
 Identities = 111/127 (87%), Positives = 120/127 (94%)
 Frame = -2

Query: 578 GGVDPTMKLLFVEMGVGYDQHGQDITVAAMRACKDAISSNSIPAFRRGSIPGVSFEEMKL 399
           G   P MKLLFVEMGVGYDQHGQDITVAAMRAC+DAISSNSIPAFRRGSIPGVSF++MKL
Sbjct: 62  GSSSPLMKLLFVEMGVGYDQHGQDITVAAMRACRDAISSNSIPAFRRGSIPGVSFDQMKL 121

Query: 398 QIKLGVPRAVQQSLDIDRVKSVFPYGKILNVDVVDGGLICSSGVQVEEMGDKNDDCYIVN 219
           QIKLGVP ++Q SLDI++VKSVFPYG+ILNV+VVDGGLICSSGV VEEMGDKNDDCYIVN
Sbjct: 122 QIKLGVPHSLQNSLDIEKVKSVFPYGEILNVEVVDGGLICSSGVLVEEMGDKNDDCYIVN 181

Query: 218 AAVYVGY 198
           AAVYVGY
Sbjct: 182 AAVYVGY 188


>ref|XP_002266892.1| PREDICTED: uncharacterized protein LOC100253185 [Vitis vinifera]
          Length = 194

 Score =  228 bits (581), Expect = 1e-57
 Identities = 111/146 (76%), Positives = 127/146 (86%), Gaps = 4/146 (2%)
 Frame = -2

Query: 623 LKPTKTMQSSTSTGVGGVDP----TMKLLFVEMGVGYDQHGQDITVAAMRACKDAISSNS 456
           ++    M++  S G   ++     +MKLLFVEMGVGYDQHGQD+T AAMRAC+DAISSNS
Sbjct: 49  IRAVTAMEAEQSGGTASIESGSAQSMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNS 108

Query: 455 IPAFRRGSIPGVSFEEMKLQIKLGVPRAVQQSLDIDRVKSVFPYGKILNVDVVDGGLICS 276
           IPAFRRGSIPGV+F++MKLQIKLGVPR +Q SLDI+RVKSVFPYGKI+N +VVDGGLICS
Sbjct: 109 IPAFRRGSIPGVTFDQMKLQIKLGVPRPLQHSLDIERVKSVFPYGKIINFEVVDGGLICS 168

Query: 275 SGVQVEEMGDKNDDCYIVNAAVYVGY 198
           SGVQVEEMGDKNDDCYIVNAAVYVGY
Sbjct: 169 SGVQVEEMGDKNDDCYIVNAAVYVGY 194


>gb|AAK44094.2|AF370279_1 unknown protein [Arabidopsis thaliana]
          Length = 197

 Score =  226 bits (576), Expect = 4e-57
 Identities = 120/170 (70%), Positives = 141/170 (82%), Gaps = 8/170 (4%)
 Frame = -2

Query: 683 KPQYLTTSSLSKQ-PLPHFSKL-KPTKT-----MQSSTSTGVGGV-DPTMKLLFVEMGVG 528
           +P++L  SS SKQ  L HF ++ +P K      M+++  T  GGV + TMKLLFVEMGVG
Sbjct: 30  RPKFL--SSRSKQFSLDHFPQISRPIKVIARSAMETTAETITGGVPNNTMKLLFVEMGVG 87

Query: 527 YDQHGQDITVAAMRACKDAISSNSIPAFRRGSIPGVSFEEMKLQIKLGVPRAVQQSLDID 348
           YDQHGQD+T AAM+ACK+AISSNSIPAFRRGSIPGVSF EMKLQIKLGVP ++ Q LD+D
Sbjct: 88  YDQHGQDVTSAAMKACKNAISSNSIPAFRRGSIPGVSFGEMKLQIKLGVPHSLHQQLDLD 147

Query: 347 RVKSVFPYGKILNVDVVDGGLICSSGVQVEEMGDKNDDCYIVNAAVYVGY 198
           +VKS+FPYGKI+NV+VVDGGLICSSGV VEEMGD N+DCYIVN AVYVGY
Sbjct: 148 KVKSIFPYGKIVNVEVVDGGLICSSGVLVEEMGDTNEDCYIVNVAVYVGY 197


>ref|NP_564317.1| uncharacterized protein [Arabidopsis thaliana]
           gi|238478667|ref|NP_001154380.1| uncharacterized protein
           [Arabidopsis thaliana] gi|21554055|gb|AAM63136.1|
           unknown [Arabidopsis thaliana]
           gi|23297690|gb|AAN13008.1| unknown protein [Arabidopsis
           thaliana] gi|332192912|gb|AEE31033.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332192914|gb|AEE31035.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 198

 Score =  226 bits (576), Expect = 4e-57
 Identities = 120/170 (70%), Positives = 141/170 (82%), Gaps = 8/170 (4%)
 Frame = -2

Query: 683 KPQYLTTSSLSKQ-PLPHFSKL-KPTKT-----MQSSTSTGVGGV-DPTMKLLFVEMGVG 528
           +P++L  SS SKQ  L HF ++ +P K      M+++  T  GGV + TMKLLFVEMGVG
Sbjct: 31  RPKFL--SSRSKQFSLDHFPQISRPIKVIARSAMETTAETITGGVPNNTMKLLFVEMGVG 88

Query: 527 YDQHGQDITVAAMRACKDAISSNSIPAFRRGSIPGVSFEEMKLQIKLGVPRAVQQSLDID 348
           YDQHGQD+T AAM+ACK+AISSNSIPAFRRGSIPGVSF EMKLQIKLGVP ++ Q LD+D
Sbjct: 89  YDQHGQDVTSAAMKACKNAISSNSIPAFRRGSIPGVSFGEMKLQIKLGVPHSLHQQLDLD 148

Query: 347 RVKSVFPYGKILNVDVVDGGLICSSGVQVEEMGDKNDDCYIVNAAVYVGY 198
           +VKS+FPYGKI+NV+VVDGGLICSSGV VEEMGD N+DCYIVN AVYVGY
Sbjct: 149 KVKSIFPYGKIVNVEVVDGGLICSSGVLVEEMGDTNEDCYIVNVAVYVGY 198


Top