BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020552
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    72   5e-10
ref|XP_002865315.1| F-box family protein [Arabidopsis lyrata sub...    72   5e-10
ref|NP_001078614.1| F-box/FBD/LRR-repeat protein [Arabidopsis th...    70   2e-09
ref|XP_002872011.1| F-box family protein [Arabidopsis lyrata sub...    69   4e-09
ref|NP_199308.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    69   4e-09

>ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
            gi|75262213|sp|Q9C8Y8.1|FDL7_ARATH RecName: Full=Putative
            F-box/FBD/LRR-repeat protein At1g66290
            gi|12324394|gb|AAG52161.1|AC020665_6 hypothetical
            protein; 16490-14953 [Arabidopsis thaliana]
            gi|332196370|gb|AEE34491.1| putative F-box/FBD/LRR-repeat
            protein [Arabidopsis thaliana]
          Length = 453

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 25/343 (7%)
 Frame = -2

Query: 1349 WIYFAIKHNVRVMELSFPWELFPDSVFMCHTLTELRLEYVEIHLPRTVSFPCLKILKLTE 1170
            WIY AIK  V+ +++++P       ++ C +L  L+L  V +  P  VS P LK+L L  
Sbjct: 122  WIYMAIKRKVQHIDVTWPGVRIYPEIYNCESLVSLKLSEVTLTKPEFVSLPSLKVLVLDW 181

Query: 1169 NVLYGEKLTENLFSSCLMLEELIIRSCGWHDFSIIISSPPNLKVLELLE----------- 1023
               Y E   + L S C +LE           F++      N++VL ++            
Sbjct: 182  VEFYNEFAFDMLMSGCPVLES----------FTLCRRYLDNVRVLRVISQSLLSFNYYGS 231

Query: 1022 -NEDGNDASDIFICSPNLKELKYFGPTLPRIDEEIYSSLVTLD----FELCERPCFEPD- 861
             ++   D   + + +P L++LK           E  SSLV  D    F  C    F+PD 
Sbjct: 232  SSKSFRDDLVVILDAPKLEKLKLSHQLTASFIIENLSSLVEADIDIEFNFCRGKKFDPDD 291

Query: 860  ----YSVAEWLKGLRNVAKLSLDSYCFEVLGQDPNLEACLPTSCCSLRHLHLVIWPVKDY 693
                  +  +L GL  V  +++ +   EV+    +   C P         +L  + V+ Y
Sbjct: 292  LPKREMIRNFLVGLSRVKTMTIAACTLEVIY---DYSRCEPLPLFP----NLSFFSVEFY 344

Query: 692  VK---VLILLLRSYPNLETLHISFGTELGSKSILVSSEQSKVLFNAYFXXXXXXXXXXXX 522
             K   +L    +S  NL++L +        ++ ++S  + + L ++              
Sbjct: 345  QKRWEILPFFFKSCSNLKSLVLESDYFPRKRTSIIS--EPRCLLSS-------------- 388

Query: 521  XTIEIVDCRVA-DEDELHTVRYLLENSISLKKMKIAYHFSVKE 396
              +E V    A D+ ++  VRYLLENS  LKK+ ++   S ++
Sbjct: 389  --LEYVKIEFALDKGKMELVRYLLENSPILKKLTLSLDHSSRK 429


>ref|XP_002865315.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311150|gb|EFH41574.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 81/311 (26%), Positives = 134/311 (43%), Gaps = 18/311 (5%)
 Frame = -2

Query: 1292 ELFPDSVFMCHTLTELRLEYVEIHLPR-TVSFPCLKILKLTENVLYGEKLTENLFSSCLM 1116
            +  P ++F   TL  L+L  V +  P+  VS PCLKI+ L E++ Y   + E L SSC +
Sbjct: 124  DFMPSNIFKSKTLVSLKLVNVGLDNPKFVVSLPCLKIMHL-EDIFYSPLIVEKLLSSCPV 182

Query: 1115 LEELIIRSCGWHDFSIIISSPPNLKVLEL-LENEDGNDASDIFICSPNLKELKYFGPTLP 939
            LE+L I       F+ ++     LK   L  + E G+    + I +P LK + +      
Sbjct: 183  LEDLTIVRNHEDFFNFLLVRSQTLKTFRLTFDWEMGSTDFSVEIDAPGLKYMSFRDSQSD 242

Query: 938  RIDEEIYSSLVTLDFEL-------CERPCFEPDYS----VAEWLKGLRNVAKLSLDSYCF 792
            RI  +  SSLV +D +           P    D +    + ++L G+ +V  + +     
Sbjct: 243  RIVVKNLSSLVKIDLDTEFNLKFGLGSPLEPEDLTKRDIIRDFLTGISSVKHMIISHPTL 302

Query: 791  EVLGQDPNLEACLPTSCCSLRHLHLVIWPVKDYVKVLILLLRSY----PNLETLHISFGT 624
            EVL +   L   LP    +L HL         +  +L+ LL  +    PNL+ L + +  
Sbjct: 303  EVLYRYSKLGP-LP-KFHNLYHLRAA------FSSLLLPLLSDFLEICPNLKNLILDYSV 354

Query: 623  ELGSKSI-LVSSEQSKVLFNAYFXXXXXXXXXXXXXTIEIVDCRVADEDELHTVRYLLEN 447
                + I   +  Q  +L   Y               +EI +  + +E  +  V Y LEN
Sbjct: 355  SAEPEQIDFTNVPQCLILTLEY---------------VEIKELTMREETGIKLVNYFLEN 399

Query: 446  SISLKKMKIAY 414
            S  LKK+ +++
Sbjct: 400  SAVLKKLTLSF 410


>ref|NP_001078614.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
            gi|75262764|sp|Q9FNJ5.1|FDL31_ARATH RecName:
            Full=F-box/FBD/LRR-repeat protein At5g22660
            gi|10178240|dbj|BAB11672.1| unnamed protein product
            [Arabidopsis thaliana] gi|332005678|gb|AED93061.1|
            F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 450

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 85/364 (23%), Positives = 160/364 (43%), Gaps = 27/364 (7%)
 Frame = -2

Query: 1349 WIYFAIKHNVRVME----LSFPWELFPDSVFMCHTLTELRLEYVEIHLPRTVSFPCLKIL 1182
            WI  A+K  ++ +E    +    +  P +V++  +L  LRL  V +H    VS P LK++
Sbjct: 104  WIEDAVKRRIQHLEVDSRIDHMIDTLPLTVYLSESLVSLRLHLVMLHRFVFVSLPNLKVM 163

Query: 1181 KLTENVLYGEKLTENLFSSCLMLEEL-IIRSCGWHDFSIIISSPPNLKVLELLENEDG-- 1011
             L EN+    +  E   SSC +LE+L ++R+       ++  S  +L  L+L+ +     
Sbjct: 164  HLEENIYSYAETMEKFISSCPVLEDLTVVRNVDEATEKVLRVSSQSLNSLKLVIDSSKCW 223

Query: 1010 -NDASD---IFICSPNLKELKY-FGPTLPRIDEEIYSSL---VTLDFELCERPCFEPDY- 858
             ND SD   + I +P L  L      ++  +   + SS    + + F + +    E  + 
Sbjct: 224  YNDDSDDWKVVIDAPQLVYLSLKDDQSVSFVINNLCSSAKADIKVSFNVSDIWDLEESFE 283

Query: 857  --SVAEWLKGLRNVAKLSLDSYCFEVLGQDPNLEACLPTSCCSLRH------LHLVIWPV 702
              +V ++L GL ++  +++     +++             C  L+H       ++     
Sbjct: 284  RSNVGKFLTGLSSLRDMTISGTTLKII-------------CHYLKHEPMPQFRNMTRLHA 330

Query: 701  KDYV---KVLILLLRSYPNLETLHISFGTELGSKSILVSSEQSKVLFNAYFXXXXXXXXX 531
            K YV   ++L  +L S PNL++L +    E+ ++ I +SS   K L ++           
Sbjct: 331  KFYVCDLEMLPCVLESCPNLKSLVLKLKGEMENEEISLSSSVPKCLQSS----------- 379

Query: 530  XXXXTIEIVDCRVADEDELHTVRYLLENSISLKKMKIAYHFSVKEDANFRMLIAESLLKF 351
                 +EI+       +E+   +Y LENS+ LKK K+      +E  +   L+   L+ F
Sbjct: 380  --LENVEIIRPNYGSGEEMKLSKYFLENSLVLKKFKLCRDCHSEEQES---LVVRELMTF 434

Query: 350  TKGS 339
             + S
Sbjct: 435  QRCS 438


>ref|XP_002872011.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317848|gb|EFH48270.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 464

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 84/339 (24%), Positives = 133/339 (39%), Gaps = 7/339 (2%)
 Frame = -2

Query: 1295 WELFPDSVFMCHTLTELRLEYVEIHL--PRTVSFPCLKILKLTENVLYGEKLTENLFSSC 1122
            WEL P S++ C TL  LRL  V +    PR  S P LK L L ENV   E   E+L SSC
Sbjct: 142  WELMPLSLYTCKTLLHLRLYRVLLRKFDPRVDSLPRLKTLCLEENVYPNEASLESLISSC 201

Query: 1121 LMLEELIIRSCGWHDFSIIISSPPNLKVLELLENEDGNDASDIFICSPNLKELKYFGPTL 942
             +LE+L I                      +  +++  + S + + +P LK L +     
Sbjct: 202  PVLEDLTI----------------------VRADDNVRNNSGLVVDAPRLKYLTFNNEKS 239

Query: 941  PRIDEEIYSSLVTLD----FELCERPCFEPDYSVAEWLKGLRNVAKLSLDSYCFEVLGQD 774
                     SLV ++    F +        +     +L G+  V  L +     E++   
Sbjct: 240  KSKTISNLGSLVKVNILGPFNISSVVGCSKEQMAHNFLAGISTVRYLIVSEDMMELIYSY 299

Query: 773  PNLEACLPTSCCSLRHLHLVIWPVK-DYVKVLILLLRSYPNLETLHISFGTELGSKSILV 597
              +++ LP   C+L  L   +W    D++ +L  LL S PNL+ + +     +     +V
Sbjct: 300  LKVDS-LP-QFCNLSCLKASVWLSSFDFLDILPKLLESCPNLKFIVLDTTCIVNRTKAMV 357

Query: 596  SSEQSKVLFNAYFXXXXXXXXXXXXXTIEIVDCRVADEDELHTVRYLLENSISLKKMKIA 417
                S V                    +EI +    D+  L   RY +ENS++LKK+ + 
Sbjct: 358  ERRVSPV----------PKCLLSSLEFVEIKNRISVDDGALEVARYFVENSMNLKKLVLG 407

Query: 416  YHFSVKEDANFRMLIAESLLKFTKGSPNAVIELS*ILTG 300
               S          + + LL   + S    IE+   L G
Sbjct: 408  LASSFLRLRLANRAVLKDLLALPRRSSMCQIEVFNALNG 446


>ref|NP_199308.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
            gi|75262649|sp|Q9FLA2.1|FDL34_ARATH RecName:
            Full=Putative F-box/FBD/LRR-repeat protein At5g44950
            gi|10177487|dbj|BAB10878.1| unnamed protein product
            [Arabidopsis thaliana] gi|332007796|gb|AED95179.1|
            putative F-box/FBD/LRR-repeat protein [Arabidopsis
            thaliana]
          Length = 438

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 25/337 (7%)
 Frame = -2

Query: 1349 WIYFAIKHNVRVMELSF----PW--ELFPDSVFMCHTLTELRLEYVEIHLPR-TVSFPCL 1191
            WI   +   ++ ++++     PW  +  P ++    TL  L+L  V +  P+  VS PCL
Sbjct: 96   WIATVVDRGIQHLDVTATDCPPWTIDFMPANICKSKTLVSLKLVNVGLDTPKFVVSLPCL 155

Query: 1190 KILKLTENVLYGEKLTENLFSSCLMLEELIIRSCGWHDFSIIISSPPNLKVLELLENED- 1014
            KI+ L E++ Y   + ENL S C +LE+L I        + +      LK   L  +   
Sbjct: 156  KIMHL-EDIFYSPLIAENLISGCPVLEDLTIVRNHEDFLNFLRVMSQTLKNFRLTFDWGM 214

Query: 1013 GNDASDIFICSPNLKELKYFGPTLPRIDEEIYSSLVTLDFEL-------CERPCFEPDYS 855
            G++   + I +P LK + +      RI  +  SSLV +D +           P    D +
Sbjct: 215  GSNDFSVEIDAPGLKYMSFRDSQSDRIVVKNLSSLVKIDLDTEFNLKFGLGSPLEPEDLT 274

Query: 854  ----VAEWLKGLRNVAKLSLDSYCFEVL------GQDPNLEACLPTSCCSLRHLHLVIWP 705
                + ++L G+ +V  + +     EVL      GQ P           +L HL  V   
Sbjct: 275  KRDIIRDFLTGISSVKHMIISHPTLEVLYRYSKIGQLPKFH--------NLYHLQAVF-- 324

Query: 704  VKDYVKVLILLLRSYPNLETLHISFGTELGSKSILVSSEQSKVLFNAYFXXXXXXXXXXX 525
                +++L   L   PNL+ L + +          +S+E  ++ F               
Sbjct: 325  SSSLLQLLPAFLEICPNLKNLILDYS---------ISAEPEQIDFT-----NLPRCLIST 370

Query: 524  XXTIEIVDCRVADEDELHTVRYLLENSISLKKMKIAY 414
               +EI    + +E  +  V+Y LENS  LKK+ +++
Sbjct: 371  LEYVEIKQLTMREESGIKLVKYFLENSAVLKKLTLSF 407