BLASTX nr result

ID: Coptis24_contig00020531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020531
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22110.3| unnamed protein product [Vitis vinifera]              184   2e-44
ref|XP_002283630.1| PREDICTED: uncharacterized protein LOC100245...   184   2e-44
ref|NP_172138.2| uncharacterized protein [Arabidopsis thaliana] ...   166   9e-39
gb|ACU23253.1| unknown [Glycine max]                                  166   9e-39
ref|XP_002534066.1| conserved hypothetical protein [Ricinus comm...   166   1e-38

>emb|CBI22110.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  184 bits (468), Expect = 2e-44
 Identities = 107/213 (50%), Positives = 147/213 (69%), Gaps = 7/213 (3%)
 Frame = -1

Query: 1033 IRIGRETEARELLFQKRKVIQALEKSKSRIEMLDELLAKLNEAISVKESQLIGNVSSGLE 854
            ++ G+E EARELLFQK+KV+QALEKSKSRIE+LDEL AKLNEAISVKESQLI NVS  LE
Sbjct: 49   VQTGKENEARELLFQKKKVMQALEKSKSRIELLDELSAKLNEAISVKESQLINNVSLDLE 108

Query: 853  VSRQNLPTSVRIISPKEDDSDLVGVH-------AEHVEDQRLQFLEKNDAETLVSTQNED 695
            V  ++  + VRI+SPKE+ ++    +       +E  + Q  QFL  N A  L++  +ED
Sbjct: 109  VGGEDALSPVRIVSPKEETTENSNENEYFDFRPSEVGKGQEEQFLTDNQASVLLN--SED 166

Query: 694  TKVSGLSIGISDEAELVDGLSEIFSYDSYEEFLKHLDEQLDKIEVELITFLKYSALVLES 515
             +   +++GI D+ +++  L +I    SY+ FL+HLD+QL KIE EL+  L+ S L+LE+
Sbjct: 167  IQQGNVNVGIWDKDDMIGSLQQI---SSYQSFLEHLDQQLSKIEGELVAVLRLSTLILEN 223

Query: 514  VEKPKNLKVQHAQEILENVQRIRKRIASITKMK 416
              KPKN K+Q   +ILE+V+ IR RI SI + K
Sbjct: 224  EGKPKNSKLQQTMDILESVRGIRLRITSIMQTK 256


>ref|XP_002283630.1| PREDICTED: uncharacterized protein LOC100245557 [Vitis vinifera]
          Length = 287

 Score =  184 bits (468), Expect = 2e-44
 Identities = 107/213 (50%), Positives = 147/213 (69%), Gaps = 7/213 (3%)
 Frame = -1

Query: 1033 IRIGRETEARELLFQKRKVIQALEKSKSRIEMLDELLAKLNEAISVKESQLIGNVSSGLE 854
            ++ G+E EARELLFQK+KV+QALEKSKSRIE+LDEL AKLNEAISVKESQLI NVS  LE
Sbjct: 77   VQTGKENEARELLFQKKKVMQALEKSKSRIELLDELSAKLNEAISVKESQLINNVSLDLE 136

Query: 853  VSRQNLPTSVRIISPKEDDSDLVGVH-------AEHVEDQRLQFLEKNDAETLVSTQNED 695
            V  ++  + VRI+SPKE+ ++    +       +E  + Q  QFL  N A  L++  +ED
Sbjct: 137  VGGEDALSPVRIVSPKEETTENSNENEYFDFRPSEVGKGQEEQFLTDNQASVLLN--SED 194

Query: 694  TKVSGLSIGISDEAELVDGLSEIFSYDSYEEFLKHLDEQLDKIEVELITFLKYSALVLES 515
             +   +++GI D+ +++  L +I    SY+ FL+HLD+QL KIE EL+  L+ S L+LE+
Sbjct: 195  IQQGNVNVGIWDKDDMIGSLQQI---SSYQSFLEHLDQQLSKIEGELVAVLRLSTLILEN 251

Query: 514  VEKPKNLKVQHAQEILENVQRIRKRIASITKMK 416
              KPKN K+Q   +ILE+V+ IR RI SI + K
Sbjct: 252  EGKPKNSKLQQTMDILESVRGIRLRITSIMQTK 284


>ref|NP_172138.2| uncharacterized protein [Arabidopsis thaliana]
            gi|27754366|gb|AAO22632.1| unknown protein [Arabidopsis
            thaliana] gi|28393897|gb|AAO42356.1| unknown protein
            [Arabidopsis thaliana] gi|332189879|gb|AEE28000.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 277

 Score =  166 bits (420), Expect = 9e-39
 Identities = 96/213 (45%), Positives = 140/213 (65%), Gaps = 3/213 (1%)
 Frame = -1

Query: 1033 IRIGRETEARELLFQKRKVIQALEKSKSRIEMLDELLAKLNEAISVKESQLIGNVSSGLE 854
            +R G+E +AR+LL QK+KV+QAL+K+K+RIE+LD L +KLNEAISVKE+QLIGN+S  LE
Sbjct: 78   VRTGKENDARDLLLQKKKVMQALDKAKARIELLDTLSSKLNEAISVKETQLIGNISLDLE 137

Query: 853  VSRQNLPTSVRIISPK-EDDSDLVGVHAEHVEDQRLQFLEKN--DAETLVSTQNEDTKVS 683
               +N    + I+SPK E   D V     H++ + +Q +E+N  D + L+ T N    + 
Sbjct: 138  EDGENTSGGIHIVSPKPESTEDGVENDHTHLDSEGIQLIERNVEDYQELLDTNN--NVLE 195

Query: 682  GLSIGISDEAELVDGLSEIFSYDSYEEFLKHLDEQLDKIEVELITFLKYSALVLESVEKP 503
             +SIG           S +    SYE FL++LD++L +IE EL+T +  ++LVL   +KP
Sbjct: 196  DVSIG-----------SILKEVSSYESFLENLDQKLSRIEAELVTVVNVASLVLNHEDKP 244

Query: 502  KNLKVQHAQEILENVQRIRKRIASITKMKAGIN 404
            KNLKVQ   EILE ++R+R+RIA+I   +A I+
Sbjct: 245  KNLKVQQTAEILEEIRRVRERIANIICKEANIS 277


>gb|ACU23253.1| unknown [Glycine max]
          Length = 293

 Score =  166 bits (420), Expect = 9e-39
 Identities = 99/217 (45%), Positives = 140/217 (64%), Gaps = 8/217 (3%)
 Frame = -1

Query: 1033 IRIGRETEARELLFQKRKVIQALEKSKSRIEMLDELLAKLNEAISVKESQLIGNVSSGLE 854
            I+ G+E  ARE+LFQ++KV+QAL+KSK RIE+LDEL  KL+EAIS+KESQLIGNV+  +E
Sbjct: 83   IQKGQENYAREMLFQRKKVLQALDKSKRRIELLDELSTKLSEAISLKESQLIGNVTVNIE 142

Query: 853  VSRQNLPTSVRIISPKE--------DDSDLVGVHAEHVEDQRLQFLEKNDAETLVSTQNE 698
             S ++  + VRIISPKE        DDSD   +    ++D +L    +        TQN 
Sbjct: 143  DSTEDASSPVRIISPKEEVQNDVTKDDSDPDTMEFSDIQDVQLSIESEGSPLDDKETQN- 201

Query: 697  DTKVSGLSIGISDEAELVDGLSEIFSYDSYEEFLKHLDEQLDKIEVELITFLKYSALVLE 518
               +  LSI  S+E  +   LSEI    SYE+F++H+D++L +IE EL+T L  S LVL+
Sbjct: 202  --LLESLSISTSNEEYIARNLSEI---SSYEDFMEHIDKKLSEIEAELVTVLNVSTLVLD 256

Query: 517  SVEKPKNLKVQHAQEILENVQRIRKRIASITKMKAGI 407
            + E+PKN ++Q   E+LE++  IR+RI S  + K  I
Sbjct: 257  NEERPKNFRLQQTIELLESIHGIRQRIRSTKEAKLRI 293


>ref|XP_002534066.1| conserved hypothetical protein [Ricinus communis]
            gi|223525893|gb|EEF28310.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 283

 Score =  166 bits (419), Expect = 1e-38
 Identities = 101/213 (47%), Positives = 135/213 (63%), Gaps = 6/213 (2%)
 Frame = -1

Query: 1033 IRIGRETEARELLFQKRKVIQALEKSKSRIEMLDELLAKLNEAISVKESQLIGNVSSGLE 854
            I  G+E EARELLFQK+KV+QA+E+SKSRIE+LD+L AKLNEAIS+KES LIGN++  LE
Sbjct: 76   IHSGKENEARELLFQKKKVMQAMERSKSRIELLDQLSAKLNEAISIKESLLIGNIALDLE 135

Query: 853  VSRQNLPTSVRIISPKE------DDSDLVGVHAEHVEDQRLQFLEKNDAETLVSTQNEDT 692
               ++    VRIISPKE      D+            +Q LQ    ++A     ++  D 
Sbjct: 136  NDSKDASGPVRIISPKEGIVDDKDEDKYFSSVPNGSSNQDLQLYSDDEA-----SRQADK 190

Query: 691  KVSGLSIGISDEAELVDGLSEIFSYDSYEEFLKHLDEQLDKIEVELITFLKYSALVLESV 512
            ++  LS  +  E  +V GL  I    SYE+FL+HLD QL++IE EL+T L  SALV+   
Sbjct: 191  ELGSLSNDVGIEDSMVTGLVGI---SSYEDFLEHLDLQLNRIEAELVTILNVSALVINDE 247

Query: 511  EKPKNLKVQHAQEILENVQRIRKRIASITKMKA 413
            +KPKN KVQ   E+L++V+ IR RI  I + KA
Sbjct: 248  DKPKNSKVQQTIELLDSVRSIRNRIGRIIQGKA 280


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