BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020522
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]    79   3e-13
ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002336601.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containi...    62   5e-08

>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
           gi|297739328|emb|CBI28979.3| unnamed protein product
           [Vitis vinifera]
          Length = 585

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = +2

Query: 86  TVSHILQIHAQLITTHLISDTFAVSRLIVATTS-TQQMNYAELVFMQIQKPHAFIYNSMI 262
           T S ILQIHAQLITT+LISDTFA SRL+ +  S T  +NYAELVF QI +P++FI N+M+
Sbjct: 23  TSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMV 82

Query: 263 RGYVES 280
           + Y ES
Sbjct: 83  KCYTES 88


>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
          Length = 585

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = +2

Query: 86  TVSHILQIHAQLITTHLISDTFAVSRLIVATTS-TQQMNYAELVFMQIQKPHAFIYNSMI 262
           T S ILQIHAQLITT+LISDTFA SRL+ +  S T  +NYAELVF QI +P++FI N+M+
Sbjct: 23  TSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMV 82

Query: 263 RGYVES 280
           + Y ES
Sbjct: 83  KCYTES 88


>ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|222867392|gb|EEF04523.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = +2

Query: 86  TVSHILQIHAQLITTHLISDTFAVSRLIVATTSTQQMNYAELVFMQIQKPHAFIYNSMIR 265
           T+SH+  IHA LI  H I D FA S LI  + +   ++YA  VF QIQ P+ FIYNS IR
Sbjct: 27  TLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIR 86

Query: 266 GY 271
           G+
Sbjct: 87  GF 88


>ref|XP_002336601.1| predicted protein [Populus trichocarpa] gi|222836288|gb|EEE74709.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = +2

Query: 86  TVSHILQIHAQLITTHLISDTFAVSRLIVATTSTQQMNYAELVFMQIQKPHAFIYNSMIR 265
           T+SH+  IHA LI  H I D FA S LI  + +   ++YA  VF QIQ P+ FIYNS IR
Sbjct: 27  TLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIR 86

Query: 266 GY 271
           G+
Sbjct: 87  GF 88


>ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
 Frame = +2

Query: 89  VSHILQIHAQLITTHLISDTFAVSRLIV----ATTSTQQMNYAELVFMQIQKPHAFIYNS 256
           ++H+  IHA +I TH+I D FA SRLI      ++ T  ++YA  +F QIQ P+ FI+N+
Sbjct: 30  LTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNA 89

Query: 257 MIRGY 271
           MIRG+
Sbjct: 90  MIRGH 94