BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020519
         (1455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   374   e-101
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   362   1e-97
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   360   7e-97
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   357   4e-96
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                355   1e-95

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  374 bits (960), Expect = e-101
 Identities = 170/386 (44%), Positives = 260/386 (67%)
 Frame = +1

Query: 283  NDKAPGSDGFSSFFFKCTWRIIGDEFIKVVRNFFISGQMLQEVNSTCITLVPKVQSPSNL 462
            +DK+PG DG++S FFK TW IIGDEF   V++FF  G + + +NST + L+PK      +
Sbjct: 467  SDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREM 526

Query: 463  GDYKPIACCGVMYKSITKVMTRRMKQIMPKVINMNQSAFITGRSIQDNILLSHELMHNYH 642
             DY+PI+CC V+YK I+K++  R+K ++PK I  NQSAF+  R + +N+LL+ EL+ +YH
Sbjct: 527  KDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYH 586

Query: 643  RNETPPRCATKVDLRKAYDTVRWEAVTFAMKRVGMPQKFIEWVKVCVETASYSIMINGAP 822
            ++    RCA K+D+ KA+D+V+W  +      +G P++FI W+ +C+ TAS+S+ +NG  
Sbjct: 587  KDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGEL 646

Query: 823  YGYFKGRRGIRQGDPMSPYLFVLVMDLFSEIMNYSVTNNQYRLHHKCMNPIITHLSFADD 1002
             GYF+  RG+RQG  +SPYLFV+ MD+ S++++ +     +  H KC    +THLSFADD
Sbjct: 647  AGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADD 706

Query: 1003 LVAFMHGDIRTATKLRENLNTFRECTGLEVNVQKSQIYFAGVDEQTCAEIEGVLQFPKGE 1182
            L+    G IR+  ++ +  + F + +GL ++++KS +Y AG+      E+     F  G+
Sbjct: 707  LMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQ 766

Query: 1183 LPVKYLGLPLITTRLRTTDCSPLISKVRKRIQSWKGKALSYAGRLQLIKAVLNNLSVYWF 1362
            LPV+YLGLPLIT RL TTDC PL+ +VRKRI SW  + LSYAGRL LI +VL ++  +W 
Sbjct: 767  LPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWL 826

Query: 1363 ASFIIPQKAIDDINRLCRNFLWTGPD 1440
            A+F +P+K I ++ ++C  FLW+G +
Sbjct: 827  AAFRLPRKCIRELEKMCSAFLWSGTE 852


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  362 bits (930), Expect = 1e-97
 Identities = 167/389 (42%), Positives = 246/389 (63%)
 Frame = +1

Query: 268  MADIRNDKAPGSDGFSSFFFKCTWRIIGDEFIKVVRNFFISGQMLQEVNSTCITLVPKVQ 447
            +ADI + KAPG DGF+S FFK +W +I  E  + + +FF +G M + +N T +TL+PK+ 
Sbjct: 450  LADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKID 509

Query: 448  SPSNLGDYKPIACCGVMYKSITKVMTRRMKQIMPKVINMNQSAFITGRSIQDNILLSHEL 627
               +  DY+PIACC  +YK I+K++T+R++ ++ +V++  Q+ FI  R I DNILL+ EL
Sbjct: 510  EAKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATEL 569

Query: 628  MHNYHRNETPPRCATKVDLRKAYDTVRWEAVTFAMKRVGMPQKFIEWVKVCVETASYSIM 807
            +  Y+R    PRC  KVD+RKAYD+V W  +   +K +G P  FI W+  CV+T SYSI+
Sbjct: 570  IRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSIL 629

Query: 808  INGAPYGYFKGRRGIRQGDPMSPYLFVLVMDLFSEIMNYSVTNNQYRLHHKCMNPIITHL 987
            +NG P   F  ++G+RQGDP+SP+LF L M+  S  M     + ++  H KC    +THL
Sbjct: 630  LNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHL 689

Query: 988  SFADDLVAFMHGDIRTATKLRENLNTFRECTGLEVNVQKSQIYFAGVDEQTCAEIEGVLQ 1167
             FADDL+ F   D  + +K+    N+F + +GL+ +++KS IYF GV  +   ++   +Q
Sbjct: 690  MFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQ 749

Query: 1168 FPKGELPVKYLGLPLITTRLRTTDCSPLISKVRKRIQSWKGKALSYAGRLQLIKAVLNNL 1347
             P G LP +YLG+PL + +L  + C PLI K+  R Q W    LSYAGRLQL+K +L ++
Sbjct: 750  MPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSM 809

Query: 1348 SVYWFASFIIPQKAIDDINRLCRNFLWTG 1434
              YW   F +P+K I  +   CR FLWTG
Sbjct: 810  QNYWGQIFPLPKKLIKAVETTCRKFLWTG 838


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  360 bits (923), Expect = 7e-97
 Identities = 170/389 (43%), Positives = 242/389 (62%)
 Frame = +1

Query: 268  MADIRNDKAPGSDGFSSFFFKCTWRIIGDEFIKVVRNFFISGQMLQEVNSTCITLVPKVQ 447
            +A I NDKAPG DGF+++FFK +W  I  E    ++ FF + +M + +N   +TL+PKVQ
Sbjct: 447  LAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQ 506

Query: 448  SPSNLGDYKPIACCGVMYKSITKVMTRRMKQIMPKVINMNQSAFITGRSIQDNILLSHEL 627
              + + +++PIACC V+YK I+K++T RMK I+ +V+N  QS FI GR I DNILL+ EL
Sbjct: 507  HATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASEL 566

Query: 628  MHNYHRNETPPRCATKVDLRKAYDTVRWEAVTFAMKRVGMPQKFIEWVKVCVETASYSIM 807
            +  Y R    PRC  KVD+RKAYD+V W  +   +   G P +F+ W+  CV T SYS++
Sbjct: 567  IRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVL 626

Query: 808  INGAPYGYFKGRRGIRQGDPMSPYLFVLVMDLFSEIMNYSVTNNQYRLHHKCMNPIITHL 987
            +NG P   F+ R+G+RQGDPMSP+LF L M+  S  +     +  +  H KC    ITHL
Sbjct: 627  VNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHL 686

Query: 988  SFADDLVAFMHGDIRTATKLRENLNTFRECTGLEVNVQKSQIYFAGVDEQTCAEIEGVLQ 1167
             FADDL+ F   D  +   +      F   +GL  + +KS IYF GVD++T  E+   + 
Sbjct: 687  MFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVH 746

Query: 1168 FPKGELPVKYLGLPLITTRLRTTDCSPLISKVRKRIQSWKGKALSYAGRLQLIKAVLNNL 1347
               GELP +YLG+PL + +L    C PL+  +  R Q+W  K LSYAGRLQLIK++L+++
Sbjct: 747  MQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSM 806

Query: 1348 SVYWFASFIIPQKAIDDINRLCRNFLWTG 1434
              YW   F + +K I  + ++CR FLWTG
Sbjct: 807  QNYWAHIFPLSKKVIQAVEKVCRKFLWTG 835


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  357 bits (916), Expect = 4e-96
 Identities = 163/385 (42%), Positives = 260/385 (67%)
 Frame = +1

Query: 286  DKAPGSDGFSSFFFKCTWRIIGDEFIKVVRNFFISGQMLQEVNSTCITLVPKVQSPSNLG 465
            DK+PG DG++S F+K +W IIGDE I  +++FF  G + + VNST + L+PK +    + 
Sbjct: 189  DKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIK 248

Query: 466  DYKPIACCGVMYKSITKVMTRRMKQIMPKVINMNQSAFITGRSIQDNILLSHELMHNYHR 645
            DY+PI+CC V+YK+I+K++  R+K+I+PK I  NQSAF+  R + +N+LL+ EL+ +YH+
Sbjct: 249  DYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHK 308

Query: 646  NETPPRCATKVDLRKAYDTVRWEAVTFAMKRVGMPQKFIEWVKVCVETASYSIMINGAPY 825
            +    RCA K+D+ KA+D+++W  +T  +  +  P +FI W+ +C+ TAS+SI +NG   
Sbjct: 309  DSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELA 368

Query: 826  GYFKGRRGIRQGDPMSPYLFVLVMDLFSEIMNYSVTNNQYRLHHKCMNPIITHLSFADDL 1005
            GYF+  RG+RQG  +SPYLFV+ MD+ S +++ +    ++  H +C    +THL FADDL
Sbjct: 369  GYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDL 428

Query: 1006 VAFMHGDIRTATKLRENLNTFRECTGLEVNVQKSQIYFAGVDEQTCAEIEGVLQFPKGEL 1185
            +    G IR+   + + LN F    GL++ ++K+ +Y AGV + +   +     F  G+L
Sbjct: 429  MILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKL 488

Query: 1186 PVKYLGLPLITTRLRTTDCSPLISKVRKRIQSWKGKALSYAGRLQLIKAVLNNLSVYWFA 1365
            PV+YLGLPL+T RL T+D SPLI ++R+RI  W  + LS+AGRL LI +VL +++ +W  
Sbjct: 489  PVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMN 548

Query: 1366 SFIIPQKAIDDINRLCRNFLWTGPD 1440
            +F +P++ I++INR+    LW+GP+
Sbjct: 549  AFRLPRECINEINRISSALLWSGPE 573


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  355 bits (912), Expect = 1e-95
 Identities = 159/386 (41%), Positives = 255/386 (66%)
 Frame = +1

Query: 283  NDKAPGSDGFSSFFFKCTWRIIGDEFIKVVRNFFISGQMLQEVNSTCITLVPKVQSPSNL 462
            ++K PG DG++S FFK TW I G +FI  +++FFI G + + +N+T + L+PK    + +
Sbjct: 40   SNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLM 99

Query: 463  GDYKPIACCGVMYKSITKVMTRRMKQIMPKVINMNQSAFITGRSIQDNILLSHELMHNYH 642
             DY+PI+CC V+YK I+K++  R+K ++P  I  NQSAF+  R + +N+LL+ EL+ +YH
Sbjct: 100  RDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYH 159

Query: 643  RNETPPRCATKVDLRKAYDTVRWEAVTFAMKRVGMPQKFIEWVKVCVETASYSIMINGAP 822
            ++   PRCA K+D+ KA+D+V+W+ +   ++ +  P+ F  W+K+C+ TA++S+ +NG  
Sbjct: 160  KDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGEL 219

Query: 823  YGYFKGRRGIRQGDPMSPYLFVLVMDLFSEIMNYSVTNNQYRLHHKCMNPIITHLSFADD 1002
             G+F  +RG+RQG  +SPYLFV+ M++ S +++ +  +     H KC    +THL FADD
Sbjct: 220  AGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADD 279

Query: 1003 LVAFMHGDIRTATKLRENLNTFRECTGLEVNVQKSQIYFAGVDEQTCAEIEGVLQFPKGE 1182
            L+ F+ G  R+   +      F   +GL ++++KS +Y AGV E     I     F  G+
Sbjct: 280  LMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQ 339

Query: 1183 LPVKYLGLPLITTRLRTTDCSPLISKVRKRIQSWKGKALSYAGRLQLIKAVLNNLSVYWF 1362
            LPV+YLGLPL+T ++ T D SPL+ KVR +I SW  ++LSYAGRL LI +V+ +LS +W 
Sbjct: 340  LPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWM 399

Query: 1363 ASFIIPQKAIDDINRLCRNFLWTGPD 1440
            +++ +P   I +I +LC  FLW+GP+
Sbjct: 400  SAYRLPAGCIKEIEKLCSAFLWSGPE 425