BLASTX nr result
ID: Coptis24_contig00020507
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020507 (435 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f... 98 6e-19 ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated f... 98 6e-19 ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated f... 98 6e-19 ref|XP_002523964.1| TATA-binding protein-associated factor MOT1,... 89 4e-16 ref|XP_002319739.1| chromatin remodeling complex subunit [Populu... 87 2e-15 >ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3 [Vitis vinifera] Length = 2060 Score = 98.2 bits (243), Expect = 6e-19 Identities = 46/76 (60%), Positives = 59/76 (77%) Frame = +1 Query: 175 WEVRHGSMMALREIITHHGGSSGVFMPDLSSKSAHSDKTEVKQELTTLKRKMELDLNVQV 354 WE+RHGS+MALREI+TH G S+GV MPDLSS +A + + K TLKR+ E+DLN+QV Sbjct: 321 WEIRHGSVMALREILTHQGASAGVLMPDLSSGAASFIELKEKDNSNTLKREREIDLNMQV 380 Query: 355 PGEETEPNWKKLKLED 402 P +E+EPN K+LK ED Sbjct: 381 PADESEPNLKRLKSED 396 >ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 2 [Vitis vinifera] Length = 2089 Score = 98.2 bits (243), Expect = 6e-19 Identities = 46/76 (60%), Positives = 59/76 (77%) Frame = +1 Query: 175 WEVRHGSMMALREIITHHGGSSGVFMPDLSSKSAHSDKTEVKQELTTLKRKMELDLNVQV 354 WE+RHGS+MALREI+TH G S+GV MPDLSS +A + + K TLKR+ E+DLN+QV Sbjct: 350 WEIRHGSVMALREILTHQGASAGVLMPDLSSGAASFIELKEKDNSNTLKREREIDLNMQV 409 Query: 355 PGEETEPNWKKLKLED 402 P +E+EPN K+LK ED Sbjct: 410 PADESEPNLKRLKSED 425 >ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 1 [Vitis vinifera] Length = 2052 Score = 98.2 bits (243), Expect = 6e-19 Identities = 46/76 (60%), Positives = 59/76 (77%) Frame = +1 Query: 175 WEVRHGSMMALREIITHHGGSSGVFMPDLSSKSAHSDKTEVKQELTTLKRKMELDLNVQV 354 WE+RHGS+MALREI+TH G S+GV MPDLSS +A + + K TLKR+ E+DLN+QV Sbjct: 313 WEIRHGSVMALREILTHQGASAGVLMPDLSSGAASFIELKEKDNSNTLKREREIDLNMQV 372 Query: 355 PGEETEPNWKKLKLED 402 P +E+EPN K+LK ED Sbjct: 373 PADESEPNLKRLKSED 388 >ref|XP_002523964.1| TATA-binding protein-associated factor MOT1, putative [Ricinus communis] gi|223536691|gb|EEF38332.1| TATA-binding protein-associated factor MOT1, putative [Ricinus communis] Length = 1920 Score = 89.0 bits (219), Expect = 4e-16 Identities = 45/76 (59%), Positives = 57/76 (75%) Frame = +1 Query: 175 WEVRHGSMMALREIITHHGGSSGVFMPDLSSKSAHSDKTEVKQELTTLKRKMELDLNVQV 354 WEVRHGS+MALREI+THHGGS+GVFMPDLS A D+ + +TLKR+ E DLN+QV Sbjct: 312 WEVRHGSVMALREILTHHGGSAGVFMPDLSLDGA-LDELKYLDYSSTLKREREFDLNMQV 370 Query: 355 PGEETEPNWKKLKLED 402 +E EP+ K+ K E+ Sbjct: 371 SIDELEPHLKRPKFEE 386 >ref|XP_002319739.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222858115|gb|EEE95662.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2045 Score = 86.7 bits (213), Expect = 2e-15 Identities = 45/87 (51%), Positives = 60/87 (68%) Frame = +1 Query: 175 WEVRHGSMMALREIITHHGGSSGVFMPDLSSKSAHSDKTEVKQELTTLKRKMELDLNVQV 354 WEVRHGS+MALREI+THHGGS+G+ +PDLS A D+ ++ +KR+ E+DLN+QV Sbjct: 311 WEVRHGSVMALREIVTHHGGSAGLVVPDLSLDGA-LDELREREYSNAIKREREIDLNLQV 369 Query: 355 PGEETEPNWKKLKLEDGICSTIYTMTS 435 +E EPN K+ K ED T+ M S Sbjct: 370 LTDEFEPNPKRHKSEDVSSQTMDMMVS 396