BLASTX nr result

ID: Coptis24_contig00020505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020505
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32642.3| unnamed protein product [Vitis vinifera]               75   2e-11
ref|XP_003632630.1| PREDICTED: uncharacterized protein LOC100854...    62   2e-07
ref|XP_002308498.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07
ref|XP_002525209.1| conserved hypothetical protein [Ricinus comm...    60   8e-07

>emb|CBI32642.3| unnamed protein product [Vitis vinifera]
          Length = 515

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 44/95 (46%), Positives = 54/95 (56%)
 Frame = -2

Query: 949 GNREEQRNTMLDDGKKDRKWREKILEEDPGLWTVECLRGRLLAERVASKATKQNAELMXX 770
           G   E+   M+  G  D KW EK +EED  L T+ECLRGRLLAERVAS+  K++AELM  
Sbjct: 260 GESREKGKEMIACGNVDAKWSEKKMEEDDRLRTLECLRGRLLAERVASRTAKEDAELMSN 319

Query: 769 XXXXXXXXXXXXXXXXXXXEQKLKLLMGKLESLKI 665
                              E++LK LM KL+SLKI
Sbjct: 320 KLIELESKLKTEIKARNRAEKRLKFLMKKLDSLKI 354


>ref|XP_003632630.1| PREDICTED: uncharacterized protein LOC100854102 [Vitis vinifera]
          Length = 238

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 37/74 (50%), Positives = 45/74 (60%)
 Frame = -2

Query: 886 EKILEEDPGLWTVECLRGRLLAERVASKATKQNAELMXXXXXXXXXXXXXXXXXXXXXEQ 707
           EK +EED  L T+ECLRGRLLAERVAS+  K++AELM                     E+
Sbjct: 4   EKKMEEDDRLRTLECLRGRLLAERVASRTAKEDAELMSNKLIELESKLKTEIKARNRAEK 63

Query: 706 KLKLLMGKLESLKI 665
           +LK LM KL+SLKI
Sbjct: 64  RLKFLMKKLDSLKI 77


>ref|XP_002308498.1| predicted protein [Populus trichocarpa] gi|222854474|gb|EEE92021.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 41/88 (46%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
 Frame = -2

Query: 922 MLDDGKKDRKWREKILEEDPGLW-TVECLRGRLLAERVASKATKQNAELMXXXXXXXXXX 746
           M   GK+++ W E    E    W T+ECLRGRLLAER ASK  K+ AELM          
Sbjct: 1   MTAPGKEEKGWSESKKMEGRDSWRTLECLRGRLLAERQASKIAKEEAELMGNKLIELENK 60

Query: 745 XXXXXXXXXXXEQKLKLLMGKLESLKIS 662
                      E+K KLLM KLESLKIS
Sbjct: 61  IREETKLRKKAEKKHKLLMKKLESLKIS 88


>ref|XP_002525209.1| conserved hypothetical protein [Ricinus communis]
           gi|223535506|gb|EEF37175.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 266

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = -2

Query: 922 MLDDGKKDRKWR--EKILEEDPGLWTVECLRGRLLAERVASKATKQNAELMXXXXXXXXX 749
           M    K+D++W    K +E D  L T+ CLRGRLLAER ASK  K+ A+LM         
Sbjct: 1   MTATAKEDKRWSGDAKKMEGDDSLRTLHCLRGRLLAERHASKVAKEEADLMGNKLLEIET 60

Query: 748 XXXXXXXXXXXXEQKLKLLMGKLESLKIS 662
                       ++KLK L+ KLESLK+S
Sbjct: 61  KLREETKLRQKADRKLKFLLKKLESLKLS 89


Top