BLASTX nr result

ID: Coptis24_contig00020502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020502
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518500.1| hypothetical protein RCOM_0905090 [Ricinus c...    57   2e-06
ref|XP_002266891.1| PREDICTED: uncharacterized protein LOC100252...    55   4e-06

>ref|XP_002518500.1| hypothetical protein RCOM_0905090 [Ricinus communis]
           gi|223542345|gb|EEF43887.1| hypothetical protein
           RCOM_0905090 [Ricinus communis]
          Length = 632

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
 Frame = -1

Query: 240 ILSYPLAVYYVTIDLSSSSKIFCSITER***HYFGPEGDLNWMLAVSEIGH*WVD*YAEN 61
           ILS+PL VYY+   L+ SSK      +    HY GPEG+L+WM A +EI H  ++     
Sbjct: 442 ILSHPLTVYYILTTLNISSKNLLLKGKEVILHYLGPEGELDWMPAFAEISH-LLNGSGNI 500

Query: 60  H---VRTEIPTNM----SRVSSRIRVD 1
           H   V  E+PTN+    S VSSR+RV+
Sbjct: 501 HIVMVGPEVPTNLSGTTSGVSSRVRVN 527


>ref|XP_002266891.1| PREDICTED: uncharacterized protein LOC100252085 [Vitis vinifera]
          Length = 633

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
 Frame = -1

Query: 240 ILSYPLAVYYVTIDLSSSSKIFCSITER***HYFGPEGDLNWMLAVSEIGH--*WVD*YA 67
           ILS+ L VYY+   LS+SSK      +    HY GPEG+L+WM A +E+GH    +    
Sbjct: 443 ILSHALTVYYILTTLSTSSKNLLLKGKEVILHYLGPEGELDWMPAFAEVGHLLNGLGNIQ 502

Query: 66  ENHVRTEIPTNM----SRVSSRIRVD 1
              V  E+PTN+    S +SSR+RV+
Sbjct: 503 IVMVGPEVPTNLSGTTSGISSRVRVN 528


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