BLASTX nr result

ID: Coptis24_contig00020499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020499
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    61   1e-07
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    60   2e-07
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    59   5e-07

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
 Frame = +1

Query: 10  VNSDETMQGQQGAWAVVLRDERGRVTTAAKGKSEYNTIALVELQGVEQGMKLAIAQNIRK 189
           +N+D ++  Q   +  +LRD  G    A   K+  + I LVEL  + +G+ LA+   I+ 
Sbjct: 284 LNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGLGIKV 343

Query: 190 FRAQTNSQNVIAFIQKFV-FLWEANKMMRSIRRMETELEEFSIVYIYREANKLADSLASI 366
              +++S + +  I +      +AN+ +  I  +  + EE+ + + +RE NK AD L+ +
Sbjct: 344 IWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETNKAADYLSKM 403

Query: 367 IPDEAYVDISIYSFSNDVMKIIDDDVIGREYER 465
           + +   V +    F   +  II DD  GR Y R
Sbjct: 404 VLERNDVVLWPVHFPTTLQNIIKDDAQGRIYCR 436


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
 Frame = +1

Query: 10  VNSDETMQGQQGAWAVVLRDERGRVTTAAKGKSEYNTIALVELQGVEQGMKLAIAQNIRK 189
           +N+D ++      +  + RD  G    A   K+  N I LVEL  + +G+ LA    I+ 
Sbjct: 165 LNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKA 224

Query: 190 FRAQTNSQNVIAFI-QKFVFLWEANKMMRSIRRMETELEEFSIVYIYREANKLADSLASI 366
              +++S +V+  I +K  +   A   +  I  +  + E++ + + +RE NK AD L+ +
Sbjct: 225 IWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETNKAADFLSRM 284

Query: 367 IPDEAYVDISIYSFSNDVMKIIDDDVIGREYER 465
               + V +    F N +  II DD  GR Y R
Sbjct: 285 DLSGSDVVLGTADFPNGLNSIIKDDAEGRMYRR 317


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/152 (24%), Positives = 76/152 (50%)
 Frame = +1

Query: 10  VNSDETMQGQQGAWAVVLRDERGRVTTAAKGKSEYNTIALVELQGVEQGMKLAIAQNIRK 189
           +N+D ++     ++  +LRD RG    A   K+    + L EL  + +G+ L++   I+ 
Sbjct: 318 LNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWRGLVLSLGLGIKA 377

Query: 190 FRAQTNSQNVIAFIQKFVFLWEANKMMRSIRRMETELEEFSIVYIYREANKLADSLASII 369
              +++S +V+  + +     +A   +  I ++  + +++ I + +RE N+ AD LA + 
Sbjct: 378 IWVESDSMSVVRTVNRKQLCPKAVGYLNQIWKLLKKFDKYQISHSWRETNRAADHLAKMD 437

Query: 370 PDEAYVDISIYSFSNDVMKIIDDDVIGREYER 465
                V +S   F   + +II+DD  G +Y R
Sbjct: 438 LLANDVVLSPVDFPPSLSRIIEDDAKGTKYRR 469


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
 Frame = +1

Query: 10  VNSDETMQGQQGAWAVVLRDERGRVTTAAKGKSEYNTIALVELQGVEQGMKLAIAQNIRK 189
           +N+D ++      +  + RD  G    A   K+  N I LVEL  + +G+ LA    I+ 
Sbjct: 278 LNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKA 337

Query: 190 FRAQTNSQNVIAFI-QKFVFLWEANKMMRSIRRMETELEEFSIVYIYREANKLADSLASI 366
              +++S + +  I +K  +   A   +  I  +  + E++ + + +RE NK AD L+ +
Sbjct: 338 IWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETNKAADFLSKM 397

Query: 367 IPDEAYVDISIYSFSNDVMKIIDDDVIGREYER 465
                 V +    F N +  II DD  GR Y R
Sbjct: 398 DLSGNDVVLGTADFPNGLNSIIKDDAEGRMYRR 430


Top