BLASTX nr result

ID: Coptis24_contig00020495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020495
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27163.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CAN61635.1| hypothetical protein VITISV_008456 [Vitis vinifera]    96   2e-18
ref|XP_002277727.1| PREDICTED: uncharacterized protein LOC100250...    96   4e-18
ref|XP_002322374.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_003556317.1| PREDICTED: uncharacterized protein LOC100816...    86   3e-15

>emb|CBI27163.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
 Frame = +2

Query: 266 SPYFLAHWRMNKTRSLDIKGHQSGSTQLDESTLDLERNFCGFPNLPS-SSPPLQGFASGG 442
           S Y     +M++TR LD++ H SGS Q +ES LDLERN+C  PNLPS S PPLQ FASGG
Sbjct: 80  SGYVAGVLKMDRTR-LDLRFHHSGSIQSEESALDLERNYCNHPNLPSPSPPPLQAFASGG 138

Query: 443 QHSKNNAAYFSWPTSSR 493
           Q S++NAAYFSWPTSSR
Sbjct: 139 QLSESNAAYFSWPTSSR 155


>emb|CAN61635.1| hypothetical protein VITISV_008456 [Vitis vinifera]
          Length = 1092

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/69 (69%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
 Frame = +2

Query: 290 RMNKTRSLDIKGHQSGSTQLDESTLDLERNFCGFPNLPS-SSPPLQGFASGGQHSKNNAA 466
           +M++TR LD++ H SGS Q +ES LDLERN+C  PNLPS S PPLQ FASGGQ S++NAA
Sbjct: 434 KMDRTR-LDLRFHHSGSIQSEESALDLERNYCNHPNLPSPSPPPLQAFASGGQLSESNAA 492

Query: 467 YFSWPTSSR 493
           YFSWPTSSR
Sbjct: 493 YFSWPTSSR 501


>ref|XP_002277727.1| PREDICTED: uncharacterized protein LOC100250825 [Vitis vinifera]
          Length = 596

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/68 (70%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
 Frame = +2

Query: 293 MNKTRSLDIKGHQSGSTQLDESTLDLERNFCGFPNLPS-SSPPLQGFASGGQHSKNNAAY 469
           M++TR LD++ H SGS Q +ES LDLERN+C  PNLPS S PPLQ FASGGQ S++NAAY
Sbjct: 1   MDRTR-LDLRFHHSGSIQSEESALDLERNYCNHPNLPSPSPPPLQAFASGGQLSESNAAY 59

Query: 470 FSWPTSSR 493
           FSWPTSSR
Sbjct: 60  FSWPTSSR 67


>ref|XP_002322374.1| predicted protein [Populus trichocarpa] gi|222869370|gb|EEF06501.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = +2

Query: 293 MNKTRSLDIKGHQSGSTQLDESTLDLERNFCGFPNLPSSSP-PLQGFASGGQHSKNNAAY 469
           M++ R L ++ H SGS+Q +ES LDLERN+C  PNL  SSP PLQ FASGGQHS++NAAY
Sbjct: 1   MDRNR-LGLRIHHSGSSQSEESALDLERNYCSHPNLLWSSPSPLQPFASGGQHSESNAAY 59

Query: 470 FSWPTSSR 493
           FSWPT SR
Sbjct: 60  FSWPTLSR 67


>ref|XP_003556317.1| PREDICTED: uncharacterized protein LOC100816119 isoform 2 [Glycine
           max]
          Length = 600

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/67 (64%), Positives = 52/67 (77%)
 Frame = +2

Query: 293 MNKTRSLDIKGHQSGSTQLDESTLDLERNFCGFPNLPSSSPPLQGFASGGQHSKNNAAYF 472
           MN+ + LD++ H SGSTQ +ES LDLER++ G PN PSS  PLQ FA G QHS++NAAYF
Sbjct: 1   MNQNQ-LDLRAHHSGSTQSEESALDLERSYYGHPN-PSSPSPLQPFAGGAQHSESNAAYF 58

Query: 473 SWPTSSR 493
           SWPT SR
Sbjct: 59  SWPTLSR 65


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