BLASTX nr result

ID: Coptis24_contig00020488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020488
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79865.1| hypothetical protein VITISV_015374 [Vitis vinifera]    77   1e-12
emb|CAN81537.1| hypothetical protein VITISV_012160 [Vitis vinifera]    77   2e-12
emb|CAN78543.1| hypothetical protein VITISV_028081 [Vitis vinifera]    77   2e-12
emb|CAP16621.1| polyprotein [Musa acuminata subsp. malaccensis]        76   2e-12
emb|CAP16620.1| polyprotein [Musa acuminata subsp. malaccensis]        76   3e-12

>emb|CAN79865.1| hypothetical protein VITISV_015374 [Vitis vinifera]
          Length = 340

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/60 (63%), Positives = 47/60 (78%)
 Frame = +2

Query: 158 KRPGVATPRPHQTFEVHSDASDFAIGGVLVQEGHPFAYESRKLNEREKR*TVQEKGFSAL 337
           + P +A P   + FEVH+DASDFAIGGVL+QE HP A+ESRKLN+ EKR TVQEK  +A+
Sbjct: 232 EEPVLALPDHTKVFEVHTDASDFAIGGVLMQERHPIAFESRKLNDTEKRYTVQEKETTAI 291


>emb|CAN81537.1| hypothetical protein VITISV_012160 [Vitis vinifera]
          Length = 346

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/60 (61%), Positives = 47/60 (78%)
 Frame = +2

Query: 158 KRPGVATPRPHQTFEVHSDASDFAIGGVLVQEGHPFAYESRKLNEREKR*TVQEKGFSAL 337
           + P +A P   + FEVH+DASDFAIGGVL+QE HP A+ESRKLN+ E+R TVQEK  +A+
Sbjct: 232 EEPVLALPDHTKVFEVHTDASDFAIGGVLMQERHPIAFESRKLNDMERRYTVQEKEMTAI 291


>emb|CAN78543.1| hypothetical protein VITISV_028081 [Vitis vinifera]
          Length = 297

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/60 (61%), Positives = 47/60 (78%)
 Frame = +2

Query: 158 KRPGVATPRPHQTFEVHSDASDFAIGGVLVQEGHPFAYESRKLNEREKR*TVQEKGFSAL 337
           + P +A P   + FEVH+DASDFAIGGVL+QE HP A+ESRKLN+ E+R TVQEK  +A+
Sbjct: 232 EEPVLALPDHTKVFEVHTDASDFAIGGVLMQERHPIAFESRKLNDTERRYTVQEKEMTAI 291


>emb|CAP16621.1| polyprotein [Musa acuminata subsp. malaccensis]
          Length = 365

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = +2

Query: 143 QASRDKRPGVATPRPHQTFEVHSDASDFAIGGVLVQEGHPFAYESRKLNEREKR*TVQEK 322
           +A+  + P +  P   + FEVH+DASDFAIGGVL+QEGHP AYESRKLNE E+R  V EK
Sbjct: 232 KAAALEEPVLKLPNYGEPFEVHTDASDFAIGGVLMQEGHPVAYESRKLNETERRYPVHEK 291

Query: 323 GFSAL 337
             +A+
Sbjct: 292 EMTAV 296


>emb|CAP16620.1| polyprotein [Musa acuminata subsp. malaccensis]
          Length = 365

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/60 (61%), Positives = 45/60 (75%)
 Frame = +2

Query: 158 KRPGVATPRPHQTFEVHSDASDFAIGGVLVQEGHPFAYESRKLNEREKR*TVQEKGFSAL 337
           + P +  P   + FEVH+DASDFAIGGVL+QEGHP AYESRKLNE E+R  V EK  +A+
Sbjct: 237 EEPVLKLPNYGEPFEVHTDASDFAIGGVLMQEGHPVAYESRKLNETERRYPVHEKEMTAV 296


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