BLASTX nr result

ID: Coptis24_contig00020480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020480
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545150.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-pro...    94   1e-17
ref|XP_004137248.1| PREDICTED: anaphase-promoting complex subuni...    93   3e-17
emb|CBI22085.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002532792.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
gb|AAF24811.1|AC007592_4 F12K11.7 [Arabidopsis thaliana]               88   6e-16

>ref|XP_003545150.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-promoting complex subunit
           5-like [Glycine max]
          Length = 922

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
 Frame = +2

Query: 2   DDLFNFFSTLRGTLGSPDS-TVMDDQIMLDP---LGVFLRRCLLAFNQLSFEGVCHLLTN 169
           DDLFNFFS +RG LG PDS  V DDQ++LD    LG+FLRRC+LAFN LSFEGV HLLTN
Sbjct: 101 DDLFNFFSDIRGILGGPDSGAVEDDQVILDMNSNLGIFLRRCVLAFNLLSFEGVSHLLTN 160

Query: 170 IGIYAKE 190
           +GIY KE
Sbjct: 161 LGIYCKE 167


>ref|XP_004137248.1| PREDICTED: anaphase-promoting complex subunit 5-like [Cucumis
           sativus] gi|449483128|ref|XP_004156500.1| PREDICTED:
           anaphase-promoting complex subunit 5-like [Cucumis
           sativus]
          Length = 917

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/71 (70%), Positives = 57/71 (80%), Gaps = 4/71 (5%)
 Frame = +2

Query: 2   DDLFNFFSTLRGTLGSPDSTVM-DDQIMLDP---LGVFLRRCLLAFNQLSFEGVCHLLTN 169
           DDLFNFFS +RG    PDS V+ DDQI+LDP   LG+FLRRC+LAFN LSFEGVCHLLTN
Sbjct: 100 DDLFNFFSEMRG----PDSGVVEDDQIILDPNSNLGMFLRRCVLAFNVLSFEGVCHLLTN 155

Query: 170 IGIYAKEASTS 202
           IG+Y KE  +S
Sbjct: 156 IGMYCKETLSS 166


>emb|CBI22085.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/74 (70%), Positives = 56/74 (75%), Gaps = 4/74 (5%)
 Frame = +2

Query: 2   DDLFNFFSTLRGTLGSPDS-TVMDDQIMLDP---LGVFLRRCLLAFNQLSFEGVCHLLTN 169
           DDLFNFFS L G    PDS  V+DDQI+LD    LGVFLRRC+LAFN LSFEGVCHLLTN
Sbjct: 102 DDLFNFFSILAG----PDSGVVVDDQIILDSNSNLGVFLRRCILAFNLLSFEGVCHLLTN 157

Query: 170 IGIYAKEASTSHDT 211
           IG Y KEA +S  T
Sbjct: 158 IGTYCKEALSSCPT 171


>ref|XP_002532792.1| conserved hypothetical protein [Ricinus communis]
           gi|223527462|gb|EEF29594.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 917

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 49/71 (69%), Positives = 55/71 (77%), Gaps = 4/71 (5%)
 Frame = +2

Query: 2   DDLFNFFSTLRGTLGSPDSTVMDD-QIMLDP---LGVFLRRCLLAFNQLSFEGVCHLLTN 169
           DDLF FFS +RG LG  DS VMDD Q++LDP   LG+FLRRC+LAFN LSFEGVCHL TN
Sbjct: 96  DDLFTFFSEMRGILGGSDSIVMDDSQVILDPNSILGMFLRRCVLAFNVLSFEGVCHLWTN 155

Query: 170 IGIYAKEASTS 202
           I  Y KEA T+
Sbjct: 156 IANY-KEALTN 165


>gb|AAF24811.1|AC007592_4 F12K11.7 [Arabidopsis thaliana]
          Length = 819

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 4/71 (5%)
 Frame = +2

Query: 2   DDLFNFFSTLRGTLGSPDS-TVMDDQIMLDP---LGVFLRRCLLAFNQLSFEGVCHLLTN 169
           DDL NFF+ +RG LGS DS  V DDQI+LDP   LG+F+RRC+LAFN LSFEGVCHL ++
Sbjct: 100 DDLLNFFNDMRGILGSLDSGVVQDDQIILDPNSNLGMFVRRCILAFNLLSFEGVCHLFSS 159

Query: 170 IGIYAKEASTS 202
           I  Y KEA +S
Sbjct: 160 IEDYCKEAHSS 170


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