BLASTX nr result

ID: Coptis24_contig00020472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020472
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278688.1| PREDICTED: eyes absent homolog 2 [Vitis vini...   441   e-121
emb|CBI33908.3| unnamed protein product [Vitis vinifera]              420   e-115
ref|XP_002326514.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_004148733.1| PREDICTED: eyes absent homolog 4-like [Cucum...   397   e-108
gb|AFK36879.1| unknown [Medicago truncatula] gi|388507978|gb|AFK...   393   e-107

>ref|XP_002278688.1| PREDICTED: eyes absent homolog 2 [Vitis vinifera]
          Length = 323

 Score =  441 bits (1133), Expect = e-121
 Identities = 213/321 (66%), Positives = 251/321 (78%)
 Frame = +3

Query: 30  GSSINPRKRAKVVSNDTIEQQKKIMNVYIWDMDETLILLKSLLNGTYAQAFSSSKDIQKG 209
           G+S  P ++ K  +  T++    I NVYIWDMDETLILLKSLLNGTYA+ F+  KD+QKG
Sbjct: 7   GNSTIPNQKMKASAKKTLDP---ITNVYIWDMDETLILLKSLLNGTYAETFNGLKDVQKG 63

Query: 210 KGIAKKWEDYILQLCDEHFFYEQIENYNNPFLDALSAYDDGQELSNYDFSKDGLSPPLDD 389
             I K WE YILQ+ D+ FFYEQIENYN PFLDALS YDDG++LS+YDF+ DG S P DD
Sbjct: 64  VEIGKMWEKYILQVADDIFFYEQIENYNKPFLDALSQYDDGKDLSDYDFNHDGCSSPYDD 123

Query: 390 FNKRKLAYRHRVVAQKYSKGLHSIINQEMMKSWDDLYELTDIYTDGWLSSARAFLEQSSG 569
            NKRKLAYRHRV+A KY +GLH+  +Q+M+K WDDLY++TD YTD WLSSARAFLEQ S 
Sbjct: 124 LNKRKLAYRHRVIAHKYKQGLHNTFDQDMIKLWDDLYDMTDSYTDKWLSSARAFLEQCSD 183

Query: 570 GKRVLNPQFISVDEVLDSADISSKNINLLVTSGSLIPSLVKCMLFRLDDLLEHQNVYSSL 749
             +   P     + V+DS D  S+N+N+LVTSGSLIPSLVKC+LFRLD+L+ H NVYSS 
Sbjct: 184 ENKDSTP-LAPANGVVDSIDAKSQNVNVLVTSGSLIPSLVKCLLFRLDNLITHGNVYSSW 242

Query: 750 DVGKLQCFSCIKERFSSPNVRFCVIGDGWEECEAAQSMGWPFLKIDFRPRGFHRFPGLTL 929
           +VGKLQCFS IKERFS PNVRFCVIGDGWEECEAAQ+M WPF+KID RP   HRFPGLTL
Sbjct: 243 EVGKLQCFSWIKERFSGPNVRFCVIGDGWEECEAAQTMRWPFVKIDLRPGSSHRFPGLTL 302

Query: 930 RTVSHYIGVVYEVSDAETDKQ 992
           RTV HY  +VY + DAE D +
Sbjct: 303 RTVGHYFSIVYGIPDAENDDE 323


>emb|CBI33908.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  420 bits (1079), Expect = e-115
 Identities = 201/290 (69%), Positives = 233/290 (80%)
 Frame = +3

Query: 123 MDETLILLKSLLNGTYAQAFSSSKDIQKGKGIAKKWEDYILQLCDEHFFYEQIENYNNPF 302
           MDETLILLKSLLNGTYA+ F+  KD+QKG  I K WE YILQ+ D+ FFYEQIENYN PF
Sbjct: 1   MDETLILLKSLLNGTYAETFNGLKDVQKGVEIGKMWEKYILQVADDIFFYEQIENYNKPF 60

Query: 303 LDALSAYDDGQELSNYDFSKDGLSPPLDDFNKRKLAYRHRVVAQKYSKGLHSIINQEMMK 482
           LDALS YDDG++LS+YDF+ DG S P DD NKRKLAYRHRV+A KY +GLH+  +Q+M+K
Sbjct: 61  LDALSQYDDGKDLSDYDFNHDGCSSPYDDLNKRKLAYRHRVIAHKYKQGLHNTFDQDMIK 120

Query: 483 SWDDLYELTDIYTDGWLSSARAFLEQSSGGKRVLNPQFISVDEVLDSADISSKNINLLVT 662
            WDDLY++TD YTD WLSSARAFLEQ S   +   P     + V+DS D  S+N+N+LVT
Sbjct: 121 LWDDLYDMTDSYTDKWLSSARAFLEQCSDENKDSTP-LAPANGVVDSIDAKSQNVNVLVT 179

Query: 663 SGSLIPSLVKCMLFRLDDLLEHQNVYSSLDVGKLQCFSCIKERFSSPNVRFCVIGDGWEE 842
           SGSLIPSLVKC+LFRLD+L+ H NVYSS +VGKLQCFS IKERFS PNVRFCVIGDGWEE
Sbjct: 180 SGSLIPSLVKCLLFRLDNLITHGNVYSSWEVGKLQCFSWIKERFSGPNVRFCVIGDGWEE 239

Query: 843 CEAAQSMGWPFLKIDFRPRGFHRFPGLTLRTVSHYIGVVYEVSDAETDKQ 992
           CEAAQ+M WPF+KID RP   HRFPGLTLRTV HY  +VY + DAE D +
Sbjct: 240 CEAAQTMRWPFVKIDLRPGSSHRFPGLTLRTVGHYFSIVYGIPDAENDDE 289


>ref|XP_002326514.1| predicted protein [Populus trichocarpa] gi|222833836|gb|EEE72313.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  400 bits (1029), Expect = e-109
 Identities = 190/289 (65%), Positives = 226/289 (78%)
 Frame = +3

Query: 123 MDETLILLKSLLNGTYAQAFSSSKDIQKGKGIAKKWEDYILQLCDEHFFYEQIENYNNPF 302
           MDETLILLKSLLNGTYAQ F+  KD+QKG  I K WE +ILQ+CD+ FFYEQ+ENYN PF
Sbjct: 1   MDETLILLKSLLNGTYAQGFNGLKDVQKGIEIGKMWEKHILQICDDLFFYEQVENYNKPF 60

Query: 303 LDALSAYDDGQELSNYDFSKDGLSPPLDDFNKRKLAYRHRVVAQKYSKGLHSIINQEMMK 482
           LDA+S YDDG +LSNYDF++DG SPP DD NK+KLAYRHR +A KY +GLH+I++QEM+ 
Sbjct: 61  LDAMSQYDDGLDLSNYDFNQDGFSPPSDDVNKKKLAYRHRAIANKYKQGLHNILDQEMIN 120

Query: 483 SWDDLYELTDIYTDGWLSSARAFLEQSSGGKRVLNPQFISVDEVLDSADISSKNINLLVT 662
            W++LY LTD YTD WLSSARAFLEQ SG K        S D +++  D   + IN+LVT
Sbjct: 121 LWEELYNLTDEYTDRWLSSARAFLEQCSGWKEDPTRCLASTDGIINHTDAKFEPINVLVT 180

Query: 663 SGSLIPSLVKCMLFRLDDLLEHQNVYSSLDVGKLQCFSCIKERFSSPNVRFCVIGDGWEE 842
           SGSLIPSLVKC+LFRLD+ + H+NVYSS +VGK QCF  IKERF+ PNV FCVIGDGWEE
Sbjct: 181 SGSLIPSLVKCLLFRLDNSITHENVYSSWEVGKPQCFQWIKERFNGPNVHFCVIGDGWEE 240

Query: 843 CEAAQSMGWPFLKIDFRPRGFHRFPGLTLRTVSHYIGVVYEVSDAETDK 989
           CE AQ+M WPF+KI   P G HRFPGLTLRT+ +Y  VVY   DAE ++
Sbjct: 241 CEGAQAMQWPFVKIGMHPGGDHRFPGLTLRTLGYYFAVVYGDPDAENNE 289


>ref|XP_004148733.1| PREDICTED: eyes absent homolog 4-like [Cucumis sativus]
          Length = 312

 Score =  397 bits (1019), Expect = e-108
 Identities = 182/303 (60%), Positives = 232/303 (76%)
 Frame = +3

Query: 84  EQQKKIMNVYIWDMDETLILLKSLLNGTYAQAFSSSKDIQKGKGIAKKWEDYILQLCDEH 263
           + QK+ +NVY+WDMDET+ILLKSLL+GTYA+AF  SKD+++G+ + K WE  IL LCD  
Sbjct: 13  KDQKEKLNVYVWDMDETIILLKSLLDGTYAKAFGGSKDVKRGEELGKMWEKEILDLCDHF 72

Query: 264 FFYEQIENYNNPFLDALSAYDDGQELSNYDFSKDGLSPPLDDFNKRKLAYRHRVVAQKYS 443
           FFYEQIENYN PFLDAL+ YDDG++LSNYDF +DG  PP DD NKRKLA+R R +  KY 
Sbjct: 73  FFYEQIENYNQPFLDALNEYDDGRDLSNYDFDQDGFGPPCDDANKRKLAFRQRAITNKYK 132

Query: 444 KGLHSIINQEMMKSWDDLYELTDIYTDGWLSSARAFLEQSSGGKRVLNPQFISVDEVLDS 623
           +GL +I +Q+ MK W++LYE+TD+YTD W SSARAFLE+ S       P  +S D+  +S
Sbjct: 133 EGLQNIFDQQKMKRWEELYEMTDVYTDRWFSSARAFLEECSISD---EPPLVSADQTSNS 189

Query: 624 ADISSKNINLLVTSGSLIPSLVKCMLFRLDDLLEHQNVYSSLDVGKLQCFSCIKERFSSP 803
              SS+++N+LVTSG+LIPSLVKC+LFRLD L+   NVYSS +V K+QCF  IKERF  P
Sbjct: 190 TSTSSQHVNILVTSGALIPSLVKCLLFRLDHLITPGNVYSSWEVEKVQCFQWIKERFDKP 249

Query: 804 NVRFCVIGDGWEECEAAQSMGWPFLKIDFRPRGFHRFPGLTLRTVSHYIGVVYEVSDAET 983
           NVRFC IG+GWEECEAAQS+ WPF+KID +P   HRFPGL+L+T+  Y  V+Y   D+  
Sbjct: 250 NVRFCAIGNGWEECEAAQSLKWPFVKIDLQPGSLHRFPGLSLKTIGFYFSVIYGNCDSSN 309

Query: 984 DKQ 992
           D++
Sbjct: 310 DEK 312


>gb|AFK36879.1| unknown [Medicago truncatula] gi|388507978|gb|AFK42055.1| unknown
           [Medicago truncatula]
          Length = 318

 Score =  393 bits (1009), Expect = e-107
 Identities = 190/324 (58%), Positives = 241/324 (74%)
 Frame = +3

Query: 15  MDDSEGSSINPRKRAKVVSNDTIEQQKKIMNVYIWDMDETLILLKSLLNGTYAQAFSSSK 194
           M  + G+S    +  +V S D I  +   ++VYIWDMDETLILL SLL  +YA+AF+  K
Sbjct: 1   MSAASGTS---EEETRVSSGDNIHPR---LDVYIWDMDETLILLNSLLKSSYAEAFNGLK 54

Query: 195 DIQKGKGIAKKWEDYILQLCDEHFFYEQIENYNNPFLDALSAYDDGQELSNYDFSKDGLS 374
           D+QKG  + K WE+ ILQLCD+HFFYEQIE+YN PFLD LS YDDG++LS+YDF++D L 
Sbjct: 55  DVQKGVELGKMWENLILQLCDDHFFYEQIESYNKPFLDVLSKYDDGKDLSDYDFNQDELG 114

Query: 375 PPLDDFNKRKLAYRHRVVAQKYSKGLHSIINQEMMKSWDDLYELTDIYTDGWLSSARAFL 554
           PPLDD NKRKLAYRHR++A+KY +GLH+I++QE +K W++LY  TD YTD WLSSARA L
Sbjct: 115 PPLDDANKRKLAYRHRIIAEKYLQGLHNILDQETIKVWNNLYNKTDEYTDKWLSSARACL 174

Query: 555 EQSSGGKRVLNPQFISVDEVLDSADISSKNINLLVTSGSLIPSLVKCMLFRLDDLLEHQN 734
            + SG  + +       +   DS +    ++N+LVT+GSLIPSLVKC+LF LD L+ H N
Sbjct: 175 TECSGENKDVVSSITYANTSTDSINAKHHHVNVLVTAGSLIPSLVKCLLFHLDSLITHGN 234

Query: 735 VYSSLDVGKLQCFSCIKERFSSPNVRFCVIGDGWEECEAAQSMGWPFLKIDFRPRGFHRF 914
           VYSS +VGK+QCF  IK+RF+ PNVRFCVIGDGWEECEAA+ M WPF+KID RP   HRF
Sbjct: 235 VYSSWEVGKIQCFRWIKDRFNHPNVRFCVIGDGWEECEAAEIMKWPFVKIDPRPGKSHRF 294

Query: 915 PGLTLRTVSHYIGVVYEVSDAETD 986
           PGLT +TV HY  VVY  +D + +
Sbjct: 295 PGLTSKTVGHYFSVVYPNNDNDEE 318


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