BLASTX nr result

ID: Coptis24_contig00020471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020471
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526530.1| suppression of tumorigenicity, putative [Ric...   108   3e-22
ref|XP_002301838.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|NP_179622.5| DENN (AEX-3) domain-containing protein [Arabido...   104   7e-21
gb|AAM13020.1| unknown protein [Arabidopsis thaliana] gi|2319836...   104   7e-21
ref|XP_003625426.1| DENN domain-containing protein 5B [Medicago ...   102   2e-20

>ref|XP_002526530.1| suppression of tumorigenicity, putative [Ricinus communis]
           gi|223534091|gb|EEF35808.1| suppression of
           tumorigenicity, putative [Ricinus communis]
          Length = 765

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/71 (78%), Positives = 62/71 (87%)
 Frame = -1

Query: 215 SETAEVNVRLASVEEAFSLSIWTTATVCRALSLESILALFAGVLLEKQVVVVSPNLGLLS 36
           SE AEVN  LA+ EEA +LSIWTTAT+CR LSLESILAL  GVLLEKQVVVV PNLG+LS
Sbjct: 538 SEAAEVNADLAAAEEALTLSIWTTATICRVLSLESILALLTGVLLEKQVVVVCPNLGVLS 597

Query: 35  AIVLSLVPLIR 3
           AIVLSL+P+IR
Sbjct: 598 AIVLSLIPMIR 608


>ref|XP_002301838.1| predicted protein [Populus trichocarpa] gi|222843564|gb|EEE81111.1|
           predicted protein [Populus trichocarpa]
          Length = 656

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/70 (77%), Positives = 63/70 (90%)
 Frame = -1

Query: 212 ETAEVNVRLASVEEAFSLSIWTTATVCRALSLESILALFAGVLLEKQVVVVSPNLGLLSA 33
           + AEVN +LA+ EEA +LSIWTTATVCR LSLE++LAL AGVLLEKQVVVV PNLG+LSA
Sbjct: 414 KAAEVNAKLAAAEEALALSIWTTATVCRVLSLENVLALVAGVLLEKQVVVVCPNLGVLSA 473

Query: 32  IVLSLVPLIR 3
           +VLSLVP+IR
Sbjct: 474 VVLSLVPMIR 483


>ref|NP_179622.5| DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]
           gi|330251899|gb|AEC06993.1| DENN (AEX-3)
           domain-containing protein [Arabidopsis thaliana]
          Length = 1029

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/71 (70%), Positives = 63/71 (88%)
 Frame = -1

Query: 215 SETAEVNVRLASVEEAFSLSIWTTATVCRALSLESILALFAGVLLEKQVVVVSPNLGLLS 36
           S++ E+N RLA+ EEA  LS+WTTATVCR LSLE+I++L AGVLLEKQ+V++ PNLG+LS
Sbjct: 779 SDSKEINARLAAAEEAMGLSMWTTATVCRILSLETIMSLLAGVLLEKQIVIICPNLGVLS 838

Query: 35  AIVLSLVPLIR 3
           AIVLSLVP+IR
Sbjct: 839 AIVLSLVPMIR 849


>gb|AAM13020.1| unknown protein [Arabidopsis thaliana] gi|23198366|gb|AAN15710.1|
           unknown protein [Arabidopsis thaliana]
          Length = 441

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/71 (70%), Positives = 63/71 (88%)
 Frame = -1

Query: 215 SETAEVNVRLASVEEAFSLSIWTTATVCRALSLESILALFAGVLLEKQVVVVSPNLGLLS 36
           S++ E+N RLA+ EEA  LS+WTTATVCR LSLE+I++L AGVLLEKQ+V++ PNLG+LS
Sbjct: 191 SDSKEINARLAAAEEAMGLSMWTTATVCRILSLETIMSLLAGVLLEKQIVIICPNLGVLS 250

Query: 35  AIVLSLVPLIR 3
           AIVLSLVP+IR
Sbjct: 251 AIVLSLVPMIR 261


>ref|XP_003625426.1| DENN domain-containing protein 5B [Medicago truncatula]
           gi|355500441|gb|AES81644.1| DENN domain-containing
           protein 5B [Medicago truncatula]
          Length = 969

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/71 (70%), Positives = 61/71 (85%)
 Frame = -1

Query: 215 SETAEVNVRLASVEEAFSLSIWTTATVCRALSLESILALFAGVLLEKQVVVVSPNLGLLS 36
           SE  EVN +LA+ EEA +LS+WTT+T CR LSL+S+LAL  GVLLEKQVV+V PNLG+LS
Sbjct: 640 SEPTEVNPKLAAAEEALALSVWTTSTTCRVLSLDSLLALVTGVLLEKQVVIVCPNLGVLS 699

Query: 35  AIVLSLVPLIR 3
           A+VLSL+PLIR
Sbjct: 700 AVVLSLIPLIR 710


Top