BLASTX nr result

ID: Coptis24_contig00020460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020460
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   118   4e-25
emb|CBI36841.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   117   1e-24
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   116   2e-24
ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4...   115   3e-24

>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/69 (79%), Positives = 63/69 (91%)
 Frame = -1

Query: 209 SLLAAILGEMHKISGKVRVCGTTAYVPQTAWIQSGTIQENVLFGMPMDVQKYKEVIRVCS 30
           SLLA++LGEMHKISGKVRVCGTTAYV QT+WIQ+GTIQEN+LFG+PMD +KY EVIRVC 
Sbjct: 684 SLLASVLGEMHKISGKVRVCGTTAYVAQTSWIQNGTIQENILFGLPMDREKYNEVIRVCC 743

Query: 29  LAMDLEMME 3
           L  DLEMM+
Sbjct: 744 LEKDLEMMD 752


>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/69 (76%), Positives = 64/69 (92%)
 Frame = -1

Query: 209 SLLAAILGEMHKISGKVRVCGTTAYVPQTAWIQSGTIQENVLFGMPMDVQKYKEVIRVCS 30
           SLLA++LGEMHKISG+VR+CGTTAYV QT+WIQ+GTIQEN+LFG+PM+ +KY+EVIRVC 
Sbjct: 256 SLLASVLGEMHKISGQVRLCGTTAYVAQTSWIQNGTIQENILFGLPMNTEKYREVIRVCC 315

Query: 29  LAMDLEMME 3
           L  DLEMME
Sbjct: 316 LEKDLEMME 324


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/69 (76%), Positives = 64/69 (92%)
 Frame = -1

Query: 209 SLLAAILGEMHKISGKVRVCGTTAYVPQTAWIQSGTIQENVLFGMPMDVQKYKEVIRVCS 30
           SLLA++LGEMHKISG+VR+CGTTAYV QT+WIQ+GTIQEN+LFG+PM+ +KY+EVIRVC 
Sbjct: 686 SLLASVLGEMHKISGQVRLCGTTAYVAQTSWIQNGTIQENILFGLPMNTEKYREVIRVCC 745

Query: 29  LAMDLEMME 3
           L  DLEMME
Sbjct: 746 LEKDLEMME 754


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1508

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/69 (79%), Positives = 63/69 (91%)
 Frame = -1

Query: 209 SLLAAILGEMHKISGKVRVCGTTAYVPQTAWIQSGTIQENVLFGMPMDVQKYKEVIRVCS 30
           SLLA+ILGEMHKISGKVRVCGTTAYV QT+WIQ+ TI+EN+LFG+PM+ +KYKEVIRVC 
Sbjct: 686 SLLASILGEMHKISGKVRVCGTTAYVAQTSWIQNSTIEENILFGLPMNREKYKEVIRVCC 745

Query: 29  LAMDLEMME 3
           L  DLEMME
Sbjct: 746 LEKDLEMME 754


>ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/69 (76%), Positives = 64/69 (92%)
 Frame = -1

Query: 209 SLLAAILGEMHKISGKVRVCGTTAYVPQTAWIQSGTIQENVLFGMPMDVQKYKEVIRVCS 30
           SLLA+ILGEMHKISGKV+VCG+TAYV QT+WIQ+GTI+EN++FG+PM+ QKY EV+RVCS
Sbjct: 679 SLLASILGEMHKISGKVQVCGSTAYVAQTSWIQNGTIEENIIFGLPMNRQKYNEVVRVCS 738

Query: 29  LAMDLEMME 3
           L  DLEMME
Sbjct: 739 LEKDLEMME 747


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