BLASTX nr result

ID: Coptis24_contig00020456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020456
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20091.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002283739.1| PREDICTED: uncharacterized protein LOC100260...    97   1e-18
ref|XP_002868725.1| hypothetical protein ARALYDRAFT_494048 [Arab...    93   2e-17
emb|CAN83174.1| hypothetical protein VITISV_030882 [Vitis vinifera]    93   3e-17
ref|NP_001185427.1| SH2 domain protein B [Arabidopsis thaliana] ...    92   3e-17

>emb|CBI20091.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = -1

Query: 259 IVNSTSPPATIIRQTHPDIEGNVPFLVMNKEKRMMLFPLFFLLEKAPDAGNFASWCEVPC 80
           ++NST  PATII Q H DI G+ PFLV+N++K+MML PL +L  +A   GN  SW EVP 
Sbjct: 37  LMNSTPFPATIIGQVHSDITGSAPFLVLNEKKKMMLLPLLYLHREALYPGNSTSWTEVPS 96

Query: 79  ASAQNEWTFNKWVHVGCEVSLTSIRL 2
           ASA+ ++   +WVHVGCEV+   +RL
Sbjct: 97  ASAEVDFPLKRWVHVGCEVATDFMRL 122


>ref|XP_002283739.1| PREDICTED: uncharacterized protein LOC100260583 [Vitis vinifera]
          Length = 683

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = -1

Query: 259 IVNSTSPPATIIRQTHPDIEGNVPFLVMNKEKRMMLFPLFFLLEKAPDAGNFASWCEVPC 80
           ++NST  PATII Q H DI G+ PFLV+N++K+MML PL +L  +A   GN  SW EVP 
Sbjct: 37  LMNSTPFPATIIGQVHSDITGSAPFLVLNEKKKMMLLPLLYLHREALYPGNSTSWTEVPS 96

Query: 79  ASAQNEWTFNKWVHVGCEVSLTSIRL 2
           ASA+ ++   +WVHVGCEV+   +RL
Sbjct: 97  ASAEVDFPLKRWVHVGCEVATDFMRL 122


>ref|XP_002868725.1| hypothetical protein ARALYDRAFT_494048 [Arabidopsis lyrata subsp.
           lyrata] gi|297314561|gb|EFH44984.1| hypothetical protein
           ARALYDRAFT_494048 [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/86 (51%), Positives = 59/86 (68%)
 Frame = -1

Query: 259 IVNSTSPPATIIRQTHPDIEGNVPFLVMNKEKRMMLFPLFFLLEKAPDAGNFASWCEVPC 80
           +++ST+ P+TIIRQ H D+  + PFLV+++ K+MML PL  L  +APD  N +SW EVP 
Sbjct: 40  LLDSTTYPSTIIRQVHSDMSVSAPFLVLDENKKMMLLPLTLLHNEAPDPVNISSWTEVPN 99

Query: 79  ASAQNEWTFNKWVHVGCEVSLTSIRL 2
            S   E+   KWVHVGCEVS   +RL
Sbjct: 100 VSTTAEFPLQKWVHVGCEVSRNYMRL 125


>emb|CAN83174.1| hypothetical protein VITISV_030882 [Vitis vinifera]
          Length = 384

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/83 (53%), Positives = 57/83 (68%)
 Frame = -1

Query: 259 IVNSTSPPATIIRQTHPDIEGNVPFLVMNKEKRMMLFPLFFLLEKAPDAGNFASWCEVPC 80
           +VNS   PATII Q H DI G+ PFLV+N++K+MML PL +L  +A   GN  SW EVP 
Sbjct: 37  LVNSIPFPATIIGQVHSDITGSAPFLVLNEKKKMMLLPLLYLHREALYPGNSTSWTEVPS 96

Query: 79  ASAQNEWTFNKWVHVGCEVSLTS 11
           ASA+ ++   +WVHVGCE  + S
Sbjct: 97  ASAEVDFPLKRWVHVGCEEGILS 119


>ref|NP_001185427.1| SH2 domain protein B [Arabidopsis thaliana]
           gi|332197998|gb|AEE36119.1| SH2 domain protein B
           [Arabidopsis thaliana]
          Length = 696

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/86 (48%), Positives = 62/86 (72%)
 Frame = -1

Query: 259 IVNSTSPPATIIRQTHPDIEGNVPFLVMNKEKRMMLFPLFFLLEKAPDAGNFASWCEVPC 80
           ++NST+ P+TIIRQ H D+  + PFLV+++ K+MML PL  L ++APD  + +SW +VP 
Sbjct: 40  LLNSTTFPSTIIRQVHSDMSVSAPFLVLDENKKMMLLPLTLLHKEAPDPVDTSSWTQVPS 99

Query: 79  ASAQNEWTFNKWVHVGCEVSLTSIRL 2
            S ++++   KWVHVGCEVS   +RL
Sbjct: 100 VSTKSKFPLEKWVHVGCEVSRNFMRL 125


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