BLASTX nr result

ID: Coptis24_contig00020449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020449
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273892.2| PREDICTED: uncharacterized protein LOC100257...    91   1e-16
emb|CAN68197.1| hypothetical protein VITISV_039761 [Vitis vinifera]    91   1e-16
ref|XP_002306281.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_003602686.1| hypothetical protein MTR_3g096940 [Medicago ...    77   1e-12
ref|XP_002873382.1| hypothetical protein ARALYDRAFT_908857 [Arab...    77   2e-12

>ref|XP_002273892.2| PREDICTED: uncharacterized protein LOC100257607 [Vitis vinifera]
          Length = 313

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/97 (51%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
 Frame = +1

Query: 37  NDFVPLPFPSFANASLTHLTSFVHLSRXXXXXXXXXXXX--NESVNENINIWDCSSLSLY 210
           N  VPLPFPS + A LTHL SFV LSR              NE  +   + WDCSSLSL+
Sbjct: 146 NYAVPLPFPSLSQAPLTHLHSFVTLSRGLFKVVFVTHRGDSNEGNDGRASNWDCSSLSLF 205

Query: 211 SRVSGDRINSMERFSSVLVGRGWTMFKTKNGSSFVSG 321
           SR+SGDRI +ME F   L G GW++FKTK   S  SG
Sbjct: 206 SRISGDRIQTMEGFCRALTGVGWSLFKTKKNPSLDSG 242


>emb|CAN68197.1| hypothetical protein VITISV_039761 [Vitis vinifera]
          Length = 313

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/97 (51%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
 Frame = +1

Query: 37  NDFVPLPFPSFANASLTHLTSFVHLSRXXXXXXXXXXXX--NESVNENINIWDCSSLSLY 210
           N  VPLPFPS + A LTHL SFV LSR              NE  +   + WDCSSLSL+
Sbjct: 146 NYAVPLPFPSLSQAPLTHLHSFVTLSRGLFKVVFVTHRGDSNEGNDGRASNWDCSSLSLF 205

Query: 211 SRVSGDRINSMERFSSVLVGRGWTMFKTKNGSSFVSG 321
           SR+SGDRI +ME F   L G GW++FKTK   S  SG
Sbjct: 206 SRISGDRIQTMEGFCRALTGVGWSLFKTKKNPSLDSG 242


>ref|XP_002306281.1| predicted protein [Populus trichocarpa] gi|222855730|gb|EEE93277.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = +1

Query: 37  NDFVPLPFPSFANASLTHLTSFVHLSRXXXXXXXXXXXXNESVNENINI-------WDCS 195
           N+ +PLPFPS  ++SLTHL SFV LS+             + V             WDC 
Sbjct: 140 NNAIPLPFPSLYSSSLTHLRSFVSLSKGLFKLAFINSKHTKKVMGGYESDSLYDSNWDCC 199

Query: 196 SLSLYSRVSGDRINSMERFSSVLVGRGWTMFKTKNGSS 309
           S SL+ R++GDRI+SM++FS  L G GWT+FKTK  ++
Sbjct: 200 SFSLFWRLTGDRIDSMDKFSRALAGVGWTLFKTKENNT 237


>ref|XP_003602686.1| hypothetical protein MTR_3g096940 [Medicago truncatula]
           gi|355491734|gb|AES72937.1| hypothetical protein
           MTR_3g096940 [Medicago truncatula]
          Length = 273

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = +1

Query: 37  NDFVPLPFPSFANASLTHLTSFVHL-SRXXXXXXXXXXXXNESVNENINIWDCSSLSLYS 213
           N  VP+PFPSF+   LTHL  FV L  R            +++V   ++ WDC S+SL S
Sbjct: 118 NHAVPIPFPSFSTTPLTHLRFFVTLFPRAFKLVLFTSDGDSDAVG--VSNWDCCSVSLCS 175

Query: 214 RVSGDRINSMERFSSVLVGRGWTMFKTKNGSS 309
           RV+G R+++ME F  +L G+GWT FKTK   S
Sbjct: 176 RVTGIRVDTMEGFCRILAGKGWTFFKTKENPS 207


>ref|XP_002873382.1| hypothetical protein ARALYDRAFT_908857 [Arabidopsis lyrata subsp.
           lyrata] gi|297319219|gb|EFH49641.1| hypothetical protein
           ARALYDRAFT_908857 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +1

Query: 37  NDFVPLPFPSFANASLTHLTSFVHLSRXXXXXXXXXXXXNESVNEN---INIWDCSSLSL 207
           ND V L FPS + +SL+HL SFV LS               S + +   ++ WDC S+SL
Sbjct: 138 NDAVMLSFPSLSASSLSHLRSFVSLSNGLFKLVFSATTVETSSSSSPGSVSNWDCCSVSL 197

Query: 208 YSRVSGDRINSMERFSSVLVGRGWTMFKTKNGSS 309
           +SR++  RI SME FS+ L  +GWT++KTK   S
Sbjct: 198 FSRIANKRIGSMESFSNALASKGWTIYKTKENPS 231


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