BLASTX nr result

ID: Coptis24_contig00020447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020447
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39079.3| unnamed protein product [Vitis vinifera]              184   2e-44
ref|XP_002525723.1| conserved hypothetical protein [Ricinus comm...   184   2e-44
ref|XP_002266956.1| PREDICTED: uncharacterized protein LOC100249...   184   2e-44
ref|XP_002319150.1| predicted protein [Populus trichocarpa] gi|2...   183   4e-44
ref|XP_002871792.1| C2 domain-containing protein [Arabidopsis ly...   161   2e-37

>emb|CBI39079.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score =  184 bits (467), Expect = 2e-44
 Identities = 96/175 (54%), Positives = 121/175 (69%), Gaps = 12/175 (6%)
 Frame = -2

Query: 490 KQSFTEFEA-THKWIPQPEPMASMISRSTSDIKLAGFSAARPISRQTTSDSFFMGDSSRS 314
           +QS  E EA   KW+P P+ MAS+ +RS   +K A F    P+ R  +S +F   D   +
Sbjct: 209 EQSNAETEAPVPKWVPSPQVMASIENRSAPQVKFAPFE---PVHRPLSSGNF-KADLRGT 264

Query: 313 MPIERSTYDLVEKMHYLFIKIVKARQLPTNNNPTVKISVSNCHIKSKPARK-TSFFEWDQ 137
           + IER+++DLVEKMHY+F+++VKAR LPT  NP V I+VS  H+ SKPA K TSFFEWDQ
Sbjct: 265 VSIERTSFDLVEKMHYIFVRVVKARSLPTKGNPVVTIAVSGSHVSSKPALKSTSFFEWDQ 324

Query: 136 TFAFSRDTPESLSTMEISVWDPQ----------SFLGGICFDVTEIPIRDPPDSP 2
           TFAF R+TPES S +E+SVWDP+           FLGGICFDV EIP+RDPPDSP
Sbjct: 325 TFAFGRETPESTSLLEVSVWDPRPSNPSDVAGDGFLGGICFDVAEIPLRDPPDSP 379


>ref|XP_002525723.1| conserved hypothetical protein [Ricinus communis]
           gi|223535023|gb|EEF36706.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1074

 Score =  184 bits (467), Expect = 2e-44
 Identities = 91/162 (56%), Positives = 113/162 (69%), Gaps = 15/162 (9%)
 Frame = -2

Query: 442 PEPMASMISRSTSDIKLAGFSAARPISRQTTSDSFFMGDSSRSMPIERSTYDLVEKMHYL 263
           PE MA+ +S S  +IK+AG +A  PI+R     + ++ +   S+ IERS++DLVEKMHYL
Sbjct: 278 PEIMAASVSGSVPEIKVAGINAPHPITRPAAPTTNYILEPQESISIERSSFDLVEKMHYL 337

Query: 262 FIKIVKARQLPTNNNPTVKISVSNCHIKSKPARKTSFFEWDQTFAFSRDTPESLSTMEIS 83
           F+++VKA+ LPTN NP VKI  S   + S+PARKT FFEWDQTFAF RD PES S +E+S
Sbjct: 338 FVRVVKAKGLPTNGNPIVKIVASGNRVLSRPARKTGFFEWDQTFAFGRDAPESSSILEVS 397

Query: 82  VWDPQS---------------FLGGICFDVTEIPIRDPPDSP 2
           VWDP S               FLGGICFDVTEIP+RDPPDSP
Sbjct: 398 VWDPLSMDPRKQYDLAAEGAKFLGGICFDVTEIPLRDPPDSP 439


>ref|XP_002266956.1| PREDICTED: uncharacterized protein LOC100249668 [Vitis vinifera]
          Length = 1052

 Score =  184 bits (467), Expect = 2e-44
 Identities = 96/175 (54%), Positives = 121/175 (69%), Gaps = 12/175 (6%)
 Frame = -2

Query: 490 KQSFTEFEA-THKWIPQPEPMASMISRSTSDIKLAGFSAARPISRQTTSDSFFMGDSSRS 314
           +QS  E EA   KW+P P+ MAS+ +RS   +K A F    P+ R  +S +F   D   +
Sbjct: 251 EQSNAETEAPVPKWVPSPQVMASIENRSAPQVKFAPFE---PVHRPLSSGNF-KADLRGT 306

Query: 313 MPIERSTYDLVEKMHYLFIKIVKARQLPTNNNPTVKISVSNCHIKSKPARK-TSFFEWDQ 137
           + IER+++DLVEKMHY+F+++VKAR LPT  NP V I+VS  H+ SKPA K TSFFEWDQ
Sbjct: 307 VSIERTSFDLVEKMHYIFVRVVKARSLPTKGNPVVTIAVSGSHVSSKPALKSTSFFEWDQ 366

Query: 136 TFAFSRDTPESLSTMEISVWDPQ----------SFLGGICFDVTEIPIRDPPDSP 2
           TFAF R+TPES S +E+SVWDP+           FLGGICFDV EIP+RDPPDSP
Sbjct: 367 TFAFGRETPESTSLLEVSVWDPRPSNPSDVAGDGFLGGICFDVAEIPLRDPPDSP 421


>ref|XP_002319150.1| predicted protein [Populus trichocarpa] gi|222857526|gb|EEE95073.1|
           predicted protein [Populus trichocarpa]
          Length = 1040

 Score =  183 bits (465), Expect = 4e-44
 Identities = 90/163 (55%), Positives = 113/163 (69%), Gaps = 11/163 (6%)
 Frame = -2

Query: 457 KWIPQPEPMASMISRSTSDIKLAGFSAARPISRQTTSDSFFMGDSSRSMPIERSTYDLVE 278
           KW P P  + +  + S  +IK++G +A +PI R     S +  +   S+ IERS +DLVE
Sbjct: 251 KWGPAPPEIVAASTGSFPEIKVSGINAPQPIIRPVAPTSNYTLEPQESISIERSAFDLVE 310

Query: 277 KMHYLFIKIVKARQLPTNNNPTVKISVSNCHIKSKPARKTSFFEWDQTFAFSRDTPESLS 98
           KMHYLF+++VKAR LPT+ NP V+I VSN  ++SKPARKT  FEWDQTFAF RD P+S S
Sbjct: 311 KMHYLFVRVVKARYLPTSGNPVVRIEVSNSRVQSKPARKTLCFEWDQTFAFGRDAPDSSS 370

Query: 97  TMEISVWDPQ-----------SFLGGICFDVTEIPIRDPPDSP 2
            +EISVWDP            +FLGGICFDVTEIP+RDPPDSP
Sbjct: 371 IVEISVWDPHDPKSSEMAAAANFLGGICFDVTEIPLRDPPDSP 413


>ref|XP_002871792.1| C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317629|gb|EFH48051.1| C2 domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score =  161 bits (407), Expect = 2e-37
 Identities = 85/166 (51%), Positives = 110/166 (66%), Gaps = 8/166 (4%)
 Frame = -2

Query: 475 EFEATHKWIPQPEPMASMISRSTSDIKLAGFSAARPISRQTTSDSFFMGDSSRSMPIERS 296
           E E +  W   P     +ISRS S       +  +P+ R  +  + +  + S    IERS
Sbjct: 259 ESEDSMSWASAPRSPEVIISRSVSGSIPEIKNGPQPLRRSISETASYTSEISDVSTIERS 318

Query: 295 TYDLVEKMHYLFIKIVKARQLPTNNNPTVKISVSNCHIKSKPARKTSFFEWDQTFAFSRD 116
           T+DLVEKMHY+F+++VKAR LPT+ +P  KIS+S   I+SKPARKTS FEWDQTFAF RD
Sbjct: 319 TFDLVEKMHYVFVRVVKARSLPTSGSPITKISLSGTMIQSKPARKTSCFEWDQTFAFLRD 378

Query: 115 TPESLST--MEISVWDPQS------FLGGICFDVTEIPIRDPPDSP 2
           +P+  S+  +EISVWD  +      FLGGICFDV+EIP+RDPPDSP
Sbjct: 379 SPDLSSSPILEISVWDSSTGFETSQFLGGICFDVSEIPLRDPPDSP 424


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