BLASTX nr result

ID: Coptis24_contig00020439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020439
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262...    57   2e-06
emb|CBI20771.3| unnamed protein product [Vitis vinifera]               56   3e-06
emb|CBI23656.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|NP_001140706.1| uncharacterized protein LOC100272781 [Zea ma...    55   8e-06

>ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262465 [Vitis vinifera]
          Length = 1054

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +3

Query: 213 TSCYQKSSL-SLFRPLYLVGLILVTIFVCLKLMGRQDNSQPIEKRLSDLANEKPRRYSHE 389
           T C +K    S+     LV +++V  +V  K   R+D+   IEK L D    KP RY++ 
Sbjct: 675 TECIEKPKTGSIVGSFLLVLVVIVLYYVYTKNKSRKDHQMKIEKFLEDYKALKPSRYTYA 734

Query: 390 QLMSFTSNFEKNIGSGGFGDVYK 458
            +   TS+F+  +G GG+G VYK
Sbjct: 735 DIKKITSHFKDKLGEGGYGTVYK 757


>emb|CBI20771.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
 Frame = +3

Query: 255 LYLVGLILVTIFVCLK---------LMGRQDNSQPIEKRLSDLANEKPRRYSHEQLMSFT 407
           L +VG I V   +C +         L  R+ ++  +E+   ++A EKP R++ +QL SFT
Sbjct: 24  LVVVGKIAVIYLLCARKARKPIVKELQAREVDAPTMERFFQEIAKEKPVRFTAQQLCSFT 83

Query: 408 SNFEKNIGSGGFGDVYK 458
           +N+   +GSGGFG VYK
Sbjct: 84  ANYSTTLGSGGFGVVYK 100


>emb|CBI23656.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/50 (50%), Positives = 33/50 (66%)
 Frame = +3

Query: 309 GRQDNSQPIEKRLSDLANEKPRRYSHEQLMSFTSNFEKNIGSGGFGDVYK 458
           GR D S  +E  + D+  EKP R+S +QL +FT NF   +GSGGFG VY+
Sbjct: 128 GRVDGSGTVEICIQDMLKEKPVRFSPQQLAAFTQNFSTKLGSGGFGHVYR 177


>ref|NP_001140706.1| uncharacterized protein LOC100272781 [Zea mays]
           gi|194700676|gb|ACF84422.1| unknown [Zea mays]
           gi|194701776|gb|ACF84972.1| unknown [Zea mays]
           gi|414585051|tpg|DAA35622.1| TPA: putative protein
           kinase superfamily protein isoform 1 [Zea mays]
           gi|414585052|tpg|DAA35623.1| TPA: putative protein
           kinase superfamily protein isoform 2 [Zea mays]
          Length = 446

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/43 (53%), Positives = 32/43 (74%)
 Frame = +3

Query: 330 PIEKRLSDLANEKPRRYSHEQLMSFTSNFEKNIGSGGFGDVYK 458
           P+EK L+++ NEKP R+S EQL + T N+   +GSGG+G VYK
Sbjct: 69  PVEKFLNEILNEKPMRFSSEQLAACTKNYSSELGSGGYGVVYK 111


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