BLASTX nr result

ID: Coptis24_contig00020433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020433
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinif...   169   2e-40
ref|XP_004154639.1| PREDICTED: uncharacterized protein LOC101223...   169   2e-40
ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799...   167   1e-39
ref|XP_002518105.1| conserved hypothetical protein [Ricinus comm...   167   1e-39

>ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|222845956|gb|EEE83503.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  172 bits (435), Expect = 3e-41
 Identities = 79/97 (81%), Positives = 91/97 (93%)
 Frame = +2

Query: 29  FSTSIVGEKPILVRDFIQSALYDPEHGYFSQRSGSVGLLEKSIKFNQLEGRRAYMRYLDD 208
           FST+IVGEKP+LVRDFI SALYDP+HGYFSQRS SVG+LE+SI+FNQLEGR+AYM +LD 
Sbjct: 22  FSTNIVGEKPVLVRDFIHSALYDPKHGYFSQRSRSVGVLERSIRFNQLEGRKAYMNHLDK 81

Query: 209 IYKKNDIAWFTPVELFKPWYAHGIAEAIMRTANFSVP 319
           IYK++DI+WFTPVELFKPWYAHGIAEAIMRT+  SVP
Sbjct: 82  IYKRSDISWFTPVELFKPWYAHGIAEAIMRTSQLSVP 118


>ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinifera]
          Length = 450

 Score =  169 bits (429), Expect = 2e-40
 Identities = 77/98 (78%), Positives = 91/98 (92%)
 Frame = +2

Query: 26  FFSTSIVGEKPILVRDFIQSALYDPEHGYFSQRSGSVGLLEKSIKFNQLEGRRAYMRYLD 205
           FFST IVG++P+LVRDFI SALYDP HGYFS RSGSVG+LE+SIKFN+L+GR+AYM+YL+
Sbjct: 34  FFSTHIVGDRPVLVRDFIWSALYDPNHGYFSHRSGSVGMLEESIKFNRLQGRKAYMKYLE 93

Query: 206 DIYKKNDIAWFTPVELFKPWYAHGIAEAIMRTANFSVP 319
            IY +NDIAWFTPVELFKPWYA+GIAEAI+RTA+ SVP
Sbjct: 94  GIYSQNDIAWFTPVELFKPWYAYGIAEAILRTADLSVP 131


>ref|XP_004154639.1| PREDICTED: uncharacterized protein LOC101223693 [Cucumis sativus]
          Length = 185

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/101 (78%), Positives = 89/101 (88%)
 Frame = +2

Query: 17  SALFFSTSIVGEKPILVRDFIQSALYDPEHGYFSQRSGSVGLLEKSIKFNQLEGRRAYMR 196
           S   FST IVG+ P+LVRDFI SALYD  HGYF+QRS SVG+LE SIKFNQLEGR+AYMR
Sbjct: 31  SGSHFSTHIVGDDPVLVRDFIHSALYDQNHGYFAQRSRSVGVLEHSIKFNQLEGRKAYMR 90

Query: 197 YLDDIYKKNDIAWFTPVELFKPWYAHGIAEAIMRTANFSVP 319
           YLD IYK++D++WFTPVE+FKPWYAHGIAEAIMRTAN SVP
Sbjct: 91  YLDKIYKQSDVSWFTPVEIFKPWYAHGIAEAIMRTANLSVP 131


>ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799456 [Glycine max]
          Length = 441

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/97 (79%), Positives = 89/97 (91%)
 Frame = +2

Query: 29  FSTSIVGEKPILVRDFIQSALYDPEHGYFSQRSGSVGLLEKSIKFNQLEGRRAYMRYLDD 208
           +ST IVG+KP+LVRDFI SALY P HGYFSQRS SVG+L  +IKFNQL+GR+AYM+YLD+
Sbjct: 26  YSTHIVGDKPVLVRDFIHSALYHPLHGYFSQRSRSVGVLPNAIKFNQLQGRKAYMKYLDN 85

Query: 209 IYKKNDIAWFTPVELFKPWYAHGIAEAIMRTANFSVP 319
           IYK++DI+WFTPVELFKPWYAH IAEAIMRTANFSVP
Sbjct: 86  IYKQSDISWFTPVELFKPWYAHAIAEAIMRTANFSVP 122


>ref|XP_002518105.1| conserved hypothetical protein [Ricinus communis]
           gi|223542701|gb|EEF44238.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 444

 Score =  167 bits (422), Expect = 1e-39
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = +2

Query: 8   TSYSALFFSTSIVGEKPILVRDFIQSALYDPEHGYFSQRSGSVGLLEKSIKFNQLEGRRA 187
           TS     +ST IVG+KPILVRDFI SALY P HGYFSQRS SVG+LEKSIKFNQL+GR+A
Sbjct: 27  TSPFQALYSTHIVGDKPILVRDFIHSALYHPLHGYFSQRSRSVGVLEKSIKFNQLQGRKA 86

Query: 188 YMRYLDDIYKKNDIAWFTPVELFKPWYAHGIAEAIMRTANFSVP 319
           Y+ +LD IYK++DI+WFTPVELF PWYAHGIAEAIMRTAN SVP
Sbjct: 87  YLNHLDKIYKQSDISWFTPVELFNPWYAHGIAEAIMRTANLSVP 130


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