BLASTX nr result

ID: Coptis24_contig00020432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020432
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28245.3| unnamed protein product [Vitis vinifera]              490   e-136
ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t...   446   e-123
ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2...   446   e-123
ref|XP_002531956.1| conserved hypothetical protein [Ricinus comm...   437   e-120
ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782...   434   e-119

>emb|CBI28245.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score =  490 bits (1262), Expect = e-136
 Identities = 258/399 (64%), Positives = 306/399 (76%), Gaps = 1/399 (0%)
 Frame = +2

Query: 74   EVAQLVVECLVKLITTTKMKAVCNLGVWCISIQQFSPSFLANNFHPLLRAVIHALDNPIG 253
            E A  +V+ L +LI TTKMK VCNLGVWCISIQQFS SFLA +FH LLRA++HALDNPIG
Sbjct: 93   EDANFIVQSLAELIVTTKMKTVCNLGVWCISIQQFSASFLATHFHCLLRAIVHALDNPIG 152

Query: 254  SLSTTFEATQAVLKLVTQLSERMRDTSNIWAPVIYRRLLSTDKRERDMADRCLLKIRHVI 433
            SLSTT+EA QAV+KLVT+L E+M +TSNIWAP IYRRL+S DKRERDM++RCLLKI+  I
Sbjct: 153  SLSTTYEAIQAVMKLVTELREKMINTSNIWAPSIYRRLVSVDKRERDMSERCLLKIKSAI 212

Query: 434  YPPPLALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLVNE 613
             PP L LSKA+V DM + LL  MKE+L +   KV T+QAWGW+IRLLGS+A+K R LVNE
Sbjct: 213  LPPSLTLSKALVIDMTQKLLPGMKEML-NLGMKVQTMQAWGWFIRLLGSHAMKKRHLVNE 271

Query: 614  MLKIPEQTFSDSDPQVQIASQVAWEGLIDALIHPSLEPPEMN-MALGHPDQERGPMMLNK 790
            MLKIPE TFSD DPQVQI+SQVAWEGLIDALIHP L+  E N  A  +  Q+ G    N 
Sbjct: 272  MLKIPELTFSDHDPQVQISSQVAWEGLIDALIHPPLQACETNKTAQENGVQKSGTSTRN- 330

Query: 791  CNSDKTADGLPKSLRLIMTPLLGILSSKCDISVRSSCLKTWCYLLHKLDLSVNCPSVRKS 970
             NS+    G  KS++LIMTPL+GI+ SKCDISVRSSCL TWCYLLHKLD+SVN P V ++
Sbjct: 331  -NSEIQTYGFSKSVKLIMTPLIGIMLSKCDISVRSSCLNTWCYLLHKLDISVNDPLVVET 389

Query: 971  VLEPILEVVFQVGTDDKSMWLWNYCLDLLDDLVSACNRGRDYNSSQQVSRNSSTKTSSLR 1150
            VL PILE VFQ G D +S+WLWN C+DL DD V A +RG D + + QVS + S +TS L 
Sbjct: 390  VLAPILEAVFQTGPDSRSIWLWNLCVDLFDDFVLAKSRGVDCDLNHQVS-DLSARTSILG 448

Query: 1151 PNNSSKSTFNDYPIKWLPWDLSKLDIHLKVIRILISQGS 1267
                 K ++  YPIKWL WDLSKLD H+K+I  LI+QGS
Sbjct: 449  LPIPGKCSWKHYPIKWLSWDLSKLDFHIKMICTLINQGS 487


>ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula]
            gi|355510459|gb|AES91601.1| Telomere-associated protein
            RIF1 [Medicago truncatula]
          Length = 1121

 Score =  446 bits (1148), Expect = e-123
 Identities = 233/395 (58%), Positives = 295/395 (74%), Gaps = 1/395 (0%)
 Frame = +2

Query: 86   LVVECLVKLITTTKMKAVCNLGVWCISIQQFSPSFLANNFHPLLRAVIHALDNPIGSLST 265
            LV++ L KLITTTK+K VCNLGVWC S+QQ   SFL  +FH LLRA++HALDNP+GSLST
Sbjct: 95   LVLDSLAKLITTTKLKTVCNLGVWCFSVQQLGVSFLVAHFHSLLRAIVHALDNPMGSLST 154

Query: 266  TFEATQAVLKLVTQLSERMRDTSNIWAPVIYRRLLSTDKRERDMADRCLLKIRHVIYPPP 445
            TFEATQA++KL  QLSE+MRD+S+IWAP IYRR+LSTDKRE+D ++RCLLKI  ++ PP 
Sbjct: 155  TFEATQAIMKLSGQLSEQMRDSSHIWAPPIYRRILSTDKREKDSSERCLLKISSIVIPPS 214

Query: 446  LALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLVNEMLKI 625
            L LSK +V DMK  LL+ MK++L D   K+  +QAWGW+IR+LGS+ALKN+ LVN+MLKI
Sbjct: 215  LELSKVLVKDMKIKLLNGMKDLL-DSGTKIQAVQAWGWFIRMLGSHALKNKHLVNDMLKI 273

Query: 626  PEQTFSDSDPQVQIASQVAWEGLIDALI-HPSLEPPEMNMALGHPDQERGPMMLNKCNSD 802
            PE+TF+D DPQVQIA+QVAWEGLIDALI HP L   +   +     Q++     +K N  
Sbjct: 274  PERTFTDPDPQVQIATQVAWEGLIDALISHPILVSEKKTPSKDTSLQKQHSS--SKTNCV 331

Query: 803  KTADGLPKSLRLIMTPLLGILSSKCDISVRSSCLKTWCYLLHKLDLSVNCPSVRKSVLEP 982
               +G+ KS++LIMTPL+GI+SSKCDISV SSCL TWCYLLHKLD SVN  S+ K VLEP
Sbjct: 332  DQVNGIYKSIKLIMTPLIGIVSSKCDISVHSSCLNTWCYLLHKLDTSVNESSLIKMVLEP 391

Query: 983  ILEVVFQVGTDDKSMWLWNYCLDLLDDLVSACNRGRDYNSSQQVSRNSSTKTSSLRPNNS 1162
            IL+V+FQ G D K++WLWN  LDLL D VS   + RD +  +       T  SS     S
Sbjct: 392  ILKVIFQNGPDSKTIWLWNLGLDLLSDSVS--QKCRDAHCIE-------TGHSS-----S 437

Query: 1163 SKSTFNDYPIKWLPWDLSKLDIHLKVIRILISQGS 1267
             KS++  +PI+WLPWD+S+LD +L +I ++I Q S
Sbjct: 438  DKSSWKQHPIRWLPWDISRLDFYLSIIFVIIRQAS 472


>ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1|
            predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  446 bits (1146), Expect = e-123
 Identities = 228/398 (57%), Positives = 290/398 (72%)
 Frame = +2

Query: 80   AQLVVECLVKLITTTKMKAVCNLGVWCISIQQFSPSFLANNFHPLLRAVIHALDNPIGSL 259
            A LV+E L K+I +TK+K+VCNLGVWCIS+QQF  S L   F+ +L+AV+HALDNPIGSL
Sbjct: 91   ANLVLEALAKVIMSTKIKSVCNLGVWCISMQQFEASILVGCFNSVLQAVVHALDNPIGSL 150

Query: 260  STTFEATQAVLKLVTQLSERMRDTSNIWAPVIYRRLLSTDKRERDMADRCLLKIRHVIYP 439
            STTFEA QAV+KL  QLSERMR++S+IWAP ++RRLLSTDKRERD+++RCLLKIR  I P
Sbjct: 151  STTFEAMQAVMKLAAQLSERMRESSHIWAPPVFRRLLSTDKRERDISERCLLKIRPTIIP 210

Query: 440  PPLALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLVNEML 619
            PP ALSKA+  DMK  LL+ MK++L +   K+ T+QAWGW+IRL GS+A+K R L N+ML
Sbjct: 211  PPPALSKALAEDMKLKLLTVMKDLL-NQGLKIQTLQAWGWFIRLQGSHAMKYRHLTNDML 269

Query: 620  KIPEQTFSDSDPQVQIASQVAWEGLIDALIHPSLEPPEMNMALGHPDQERGPMMLNKCNS 799
            K+PE+TFSD +PQVQIAS VAWEGL+DA IHP+L   E N  + +  Q+      + C  
Sbjct: 270  KVPEKTFSDHNPQVQIASLVAWEGLVDAFIHPALLTSETNEPIKNGIQQVRTSGGSSCQI 329

Query: 800  DKTADGLPKSLRLIMTPLLGILSSKCDISVRSSCLKTWCYLLHKLDLSVNCPSVRKSVLE 979
               A G  KS++LIMTPL+GI+SSKCD+SV SSCLKTWCYLLHKLD+SVN P V + VL+
Sbjct: 330  Q--ASGFSKSIKLIMTPLIGIISSKCDVSVYSSCLKTWCYLLHKLDISVNHPWVIELVLD 387

Query: 980  PILEVVFQVGTDDKSMWLWNYCLDLLDDLVSACNRGRDYNSSQQVSRNSSTKTSSLRPNN 1159
            PI   VF+ G D K+ WLWN CLDLLDD + A  R  D+ +S QVS +S+          
Sbjct: 388  PIFGAVFRFGPDVKTFWLWNLCLDLLDDFILAKCRNLDHETSSQVSHHST---------- 437

Query: 1160 SSKSTFNDYPIKWLPWDLSKLDIHLKVIRILISQGSVS 1273
                     PIKWLPW + +LD  +K++ I+IS  S++
Sbjct: 438  ---------PIKWLPWTIGQLDFLVKMMDIIISHASIA 466


>ref|XP_002531956.1| conserved hypothetical protein [Ricinus communis]
            gi|223528402|gb|EEF30438.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1038

 Score =  437 bits (1124), Expect = e-120
 Identities = 222/395 (56%), Positives = 288/395 (72%), Gaps = 1/395 (0%)
 Frame = +2

Query: 86   LVVECLVKLITTTKMKAVCNLGVWCISIQQFSPSFLANNFHPLLRAVIHALDNPIGSLST 265
            + ++ L K+I TTK+K VCNLGVWCIS+QQF  + LA +F  LL+AV+HALDNP GSLST
Sbjct: 1    MTLDALAKVIITTKIKLVCNLGVWCISMQQFDAALLACHFQSLLQAVVHALDNPFGSLST 60

Query: 266  TFEATQAVLKLVTQLSERMRDTSNIWAPVIYRRLLSTDKRERDMADRCLLKIRHVIYPPP 445
            TFEA Q V+KLV QLSE+MR++S IW P IYRRLLS DK+E+DM++RCLLKI+  I+PPP
Sbjct: 61   TFEAIQVVMKLVAQLSEKMRESSFIWVPPIYRRLLSIDKKEKDMSERCLLKIKPAIFPPP 120

Query: 446  LALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLVNEMLKI 625
             ALSKA+V DMK  LL+EMK++L +   KV T+QAW W+I LLGS+ALKNR L+N+MLKI
Sbjct: 121  AALSKALVKDMKWKLLTEMKDLL-NQGMKVQTLQAWRWFISLLGSHALKNRHLINDMLKI 179

Query: 626  PEQTFSDSDPQVQIASQVAWEGLIDALIHPSLEPPEMNMALGHPDQERGPMMLNKCNS-D 802
            PEQTFSD   QVQIASQVAWEGLIDALIH  +   E +    +  Q   PM  +K N  +
Sbjct: 180  PEQTFSDHSSQVQIASQVAWEGLIDALIHTPMVTSEASREEVNGVQ---PMQASKGNGCE 236

Query: 803  KTADGLPKSLRLIMTPLLGILSSKCDISVRSSCLKTWCYLLHKLDLSVNCPSVRKSVLEP 982
                 L KS++L+MTPL+GI+SSKCD SV  SCL TWCYL+HKL++S+N PSV + VL P
Sbjct: 237  VHTSVLTKSIKLLMTPLIGIISSKCDTSVHISCLNTWCYLIHKLNISINHPSVIELVLTP 296

Query: 983  ILEVVFQVGTDDKSMWLWNYCLDLLDDLVSACNRGRDYNSSQQVSRNSSTKTSSLRPNNS 1162
            + + VF++  D K+ WLW+ CLDLLDD + A  +  D   S +VS +SS  TS L P+ S
Sbjct: 297  VFKAVFKMDPDTKTAWLWSLCLDLLDDFIIAKCQKLDNELSSKVSHHSSVGTSMLGPSIS 356

Query: 1163 SKSTFNDYPIKWLPWDLSKLDIHLKVIRILISQGS 1267
             +     + IKW PW + +LD+ +++I I++S  S
Sbjct: 357  GRCLEKQHSIKWFPWGIGQLDLFIEIINIILSHAS 391


>ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782723 [Glycine max]
          Length = 1894

 Score =  434 bits (1117), Expect = e-119
 Identities = 225/397 (56%), Positives = 291/397 (73%), Gaps = 1/397 (0%)
 Frame = +2

Query: 80   AQLVVECLVKLITTTKMKAVCNLGVWCISIQQFSPSFLANNFHPLLRAVIHALDNPIGSL 259
            A LV+  L KLITTTK+K+ CNLGVWC+S+QQ   SFL  +F  LLRA++HALDNP+GSL
Sbjct: 93   ANLVLGALPKLITTTKLKSACNLGVWCLSVQQLGASFLDTHFPSLLRAIVHALDNPMGSL 152

Query: 260  STTFEATQAVLKLVTQLSERMRDTSNIWAPVIYRRLLSTDKRERDMADRCLLKIRHVIYP 439
            STTFEATQAV+KL  QLSE+M+ +S+IWAP IYRRL+STDKR RD ++RCLLKIR  + P
Sbjct: 153  STTFEATQAVMKLSGQLSEQMKGSSHIWAPPIYRRLISTDKRGRDASERCLLKIRSTVIP 212

Query: 440  PPLALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLVNEML 619
            P L LSK +V DMK  LL+ MK++L D+  K+  I AWGW++R+LGSYA +NR LVN+ML
Sbjct: 213  PSLDLSKVIVKDMKIKLLNGMKDLL-DNGMKIQAIHAWGWFVRMLGSYASRNRHLVNDML 271

Query: 620  KIPEQTFSDSDPQVQIASQVAWEGLIDALIH-PSLEPPEMNMALGHPDQERGPMMLNKCN 796
            KIPE+TF+D DPQ+QIA+QVAWEGLIDAL+H P+    +   A  +  +++  +   KC 
Sbjct: 272  KIPERTFTDLDPQIQIATQVAWEGLIDALVHCPTFVSEKSKSAEENSLEKQHSLGRKKC- 330

Query: 797  SDKTADGLPKSLRLIMTPLLGILSSKCDISVRSSCLKTWCYLLHKLDLSVNCPSVRKSVL 976
             D  A+G  KS++LIMTPL+GI+SSKCDISV SSCL TWCYLLHKLD+S+N PSV K VL
Sbjct: 331  -DDQANGFLKSIKLIMTPLIGIMSSKCDISVHSSCLNTWCYLLHKLDISINEPSVIKMVL 389

Query: 977  EPILEVVFQVGTDDKSMWLWNYCLDLLDDLVSACNRGRDYNSSQQVSRNSSTKTSSLRPN 1156
            EPIL+ +FQ G +  S+ LWN  LDLL D +S       Y S+  VS     K S   P+
Sbjct: 390  EPILKAIFQNGPNSNSICLWNLGLDLLSDSISQKCMDVFYQSTGPVSH----KISENGPS 445

Query: 1157 NSSKSTFNDYPIKWLPWDLSKLDIHLKVIRILISQGS 1267
             S K ++  + I+W+PW++++LD +L +I  LI Q S
Sbjct: 446  LSGKCSWKQHLIRWMPWNINQLDFYLNMIFHLIHQAS 482


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