BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020425
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    85   1e-14
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    84   3e-14
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    83   5e-14
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    81   1e-13
ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|35548...    79   5e-13

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 61/171 (35%), Positives = 83/171 (48%), Gaps = 21/171 (12%)
 Frame = +1

Query: 22  RLNWLATKKASSDVPTLIVSFDFVAEQFHEVPHPKCV----CSIMDARVLGGQLCILYRP 189
           RL+W+   +    V   IVSFD   EQF E+P P C     C+     VLGG L      
Sbjct: 240 RLHWVTRPRRY--VTRFIVSFDLADEQFREIPKPDCGGLSRCNY-HLLVLGGCLSAAVHR 296

Query: 190 SGGGADMWVMKDYGVIDSWNCLFTIP------LLTEVEQPM-----------MRILSFSK 318
           S G  ++WVMK+Y V +SW   F I       L  +V +P            +R+L   K
Sbjct: 297 SNGKLEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCLLK 356

Query: 319 IGKLLLEYDHEDLVLYYPELEQYEVLQICGFPEWFKAEAYVGSLVSLKSGT 471
            G++LLEY    LV Y PE  +++ L + G P WF+   +VGSL  + S T
Sbjct: 357 NGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSLSWIDSNT 407


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 58/155 (37%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
 Frame = +1

Query: 25  LNWLATK--KASSDVPTLIVSFDFVAEQFHEVPHPKCVCSI--MDARVLGGQLCILYRPS 192
           ++W AT   K   +   LIV+FD  AE+F  +P P    +   M+  VLGG LC+    +
Sbjct: 222 VHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKN 281

Query: 193 GGGADMWVMKDYGVIDSWNCLFTIPLLTEVEQPMM--RILSFSKIG-KLLLEYDHEDLVL 363
               ++WVMK+YGV +SW  L T+    +V+   +  R L++SK G K+LLE D+   V 
Sbjct: 282 CKQVEIWVMKEYGVKESWTHLCTVIAQLQVKAFWLHARPLAYSKGGDKILLELDNRFFVW 341

Query: 364 YYPELEQYEVLQICGFPEWFKAEAYVGSLVSLKSG 468
           Y     + ++++I G P  F AE  VGSLV+L  G
Sbjct: 342 YDLRRRKSKIIRIRGAPPIFIAEICVGSLVTLNGG 376


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 6/177 (3%)
 Frame = +1

Query: 25  LNWLATKKASSDVPTLIVSFDFVAEQFHEVPHP----KCVCSIMDARVLGGQLCILYRPS 192
           L+W+  ++    +   ++ FD   ++F E+P P    K +   +D  VL G LC++    
Sbjct: 221 LHWIVPQRRELGIRDCVLGFDIRDDKFFELPQPDYENKGMNFHVDVGVLEGNLCVMCNYE 280

Query: 193 GGGADMWVMKDYGVIDSWNCLFTIPLLTEVEQPM-MRILSFSKIGKL-LLEYDHEDLVLY 366
               D+WVMK+YGV +SW  +F++  +  +   M +R L +SK G + LLE + E L+ Y
Sbjct: 281 HVCVDVWVMKEYGVKESWCKMFSVHAIKWISAFMFLRPLVYSKGGDMVLLEVNGEKLLWY 340

Query: 367 YPELEQYEVLQICGFPEWFKAEAYVGSLVSLKSGTYVEQKQAKKNAINAGDEEKRSS 537
             + +  +V+++ G P  F +E YV SL+ +  G  +  K  K+  ++  +EEKR +
Sbjct: 341 DWKNKHAKVVRVRGGPSSFGSEMYVESLIRINDGDRIGWK--KQQELDEEEEEKRKT 395


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
 Frame = +1

Query: 25  LNWLATKKASSDVPTLIVSFDFVAEQFHEVPHPKCVCSI--MDARVLGGQLCILYRPSGG 198
           L+W+ T+    +   LIV+FD   E F EV  P  V     MD  +L G LCI+      
Sbjct: 208 LHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTVDGKFDMDVALLRGMLCIIENRGSD 267

Query: 199 GADMWVMKDYGVIDSWNCLFTIPLLTEVE-QPMMRILSFSKIG-KLLLEYDHEDLVLYYP 372
           G D+WVM++YG  DSW  +FT+    +V+    ++ L +S+ G K+L E D + L  Y  
Sbjct: 268 GFDVWVMREYGSHDSWCKMFTVGQPRDVKLMKSLKPLGYSRNGDKVLFEQDSKKLCWYNL 327

Query: 373 ELEQYEVLQICGFPEWFKAEAYVGSLV--SLKSGTYVEQKQAKKNAINAGDEEKRSSLL 543
             +    ++I G P   +    VGSLV  SL     V+ K  K+  +   +++KR   L
Sbjct: 328 ASKDVSWVRISGIPNSIEGTVCVGSLVKPSLMMNRSVQSK--KQKLVEEKNKKKRDDFL 384


>ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|355483285|gb|AES64488.1|
           F-box protein [Medicago truncatula]
          Length = 391

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 57/158 (36%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
 Frame = +1

Query: 7   SLKIQRLNWLATKKASSDVPTLIVSFDFVAEQFHEVPHPKC-------VCSIMDARVLGG 165
           +L    L+W+ T+K     P LIV+F+   E F+EVP P+            +D  VLGG
Sbjct: 205 NLNSNSLHWVVTRKLEPFQPDLIVAFNLTLEIFNEVPLPEIGEVNNESESFEIDVAVLGG 264

Query: 166 QLCILYRPSGGGADMWVMKDYGVIDSWNCLFT-IPLLTEVEQPMMRILSFSKIG-KLLLE 339
            L ++        D+WVMK+YG+ DSW  LFT + L        +R L +S  G K+LLE
Sbjct: 265 CLSMIVNYQTTQIDVWVMKEYGLKDSWCKLFTLVGLFFPTPLKSLRPLGYSSDGKKVLLE 324

Query: 340 YDHEDLVLYYPELEQYEVLQICGFPEWFKAEAYVGSLV 453
            D + L  Y  +L+   V  + G P   +A   VGSLV
Sbjct: 325 IDRKKLFWY--DLKSENVTSVPGIPNMNEAMICVGSLV 360