BLASTX nr result

ID: Coptis24_contig00020422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020422
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274661.1| PREDICTED: uncharacterized protein LOC100241...   518   e-144
ref|XP_002523784.1| conserved hypothetical protein [Ricinus comm...   508   e-141
emb|CBI28342.3| unnamed protein product [Vitis vinifera]              498   e-138
ref|XP_002306230.1| predicted protein [Populus trichocarpa] gi|2...   496   e-138
ref|XP_003606128.1| hypothetical protein MTR_4g053410 [Medicago ...   493   e-137

>ref|XP_002274661.1| PREDICTED: uncharacterized protein LOC100241698 [Vitis vinifera]
          Length = 399

 Score =  518 bits (1334), Expect = e-144
 Identities = 243/327 (74%), Positives = 286/327 (87%), Gaps = 1/327 (0%)
 Frame = +3

Query: 171  SNDIPSKFLLYQESVQMPKGDISYLHKFFLMYIGGRVPLHFQEDFCGTALLSTEWLRTDP 350
            ++D+PSKFLLYQ+SVQ PKGDISYL KFFLMY+GGRVPLH QEDFCGTALLSTEWLR+DP
Sbjct: 73   TDDMPSKFLLYQQSVQSPKGDISYLQKFFLMYVGGRVPLHLQEDFCGTALLSTEWLRSDP 132

Query: 351  RRTSVGVDLDLEALTWCLENNVNKIGADVYSRISLFHGNVLEPTEAKRVKLELHDLVNNV 530
            RRT+VG+DLD+EAL WC+ENNVNKIGAD YSR+SLFHGNVL+P E+K VK +L D++ N 
Sbjct: 133  RRTAVGLDLDVEALDWCMENNVNKIGADGYSRLSLFHGNVLQPLESKLVKSQLSDIIRNF 192

Query: 531  TLGENEGCSETTPQESSKDEVPSSSFDGGLLK-NSPLPARDIVCAFNYSCCCLHKRSELV 707
            TL ++   S T P +S+    P++S DG ++K N  LPARDIVCAFNYSCCCLHKR ELV
Sbjct: 193  TLEDSIADSGTVPLDSNIQACPNASTDGEIIKRNFGLPARDIVCAFNYSCCCLHKRGELV 252

Query: 708  LYFKHVLTSLSKRGGIFVMDVYGGTSSEREIHLQRKFPNFTYIWEQAEFDIIQRTTRISL 887
            LYFKHVL  LSK+GGIFVMD+YGGTSSE ++ LQR+FPNFTY WEQAEFDIIQR TRISL
Sbjct: 253  LYFKHVLDVLSKKGGIFVMDLYGGTSSECKLRLQRRFPNFTYYWEQAEFDIIQRKTRISL 312

Query: 888  HFNLRKQQRKILHAFSYSWRLWSLPEIKDCMEEAGFKSVHFWIRQMPDTNDVKNSEAFTV 1067
            HF+L+KQQRK+ HAFSYSWRLWSLPEIKDC+EEAGF SVHFWIRQMPDT + +++E F +
Sbjct: 313  HFHLQKQQRKLRHAFSYSWRLWSLPEIKDCLEEAGFHSVHFWIRQMPDTEENRSTEGFGI 372

Query: 1068 GRDVKYEEVSTFQQEDAWNAYVVGVAK 1148
            G+DVKYEEV++FQQ+DAWNAY+VGV K
Sbjct: 373  GQDVKYEEVASFQQQDAWNAYIVGVVK 399


>ref|XP_002523784.1| conserved hypothetical protein [Ricinus communis]
            gi|223536872|gb|EEF38510.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 394

 Score =  508 bits (1307), Expect = e-141
 Identities = 237/327 (72%), Positives = 283/327 (86%), Gaps = 1/327 (0%)
 Frame = +3

Query: 168  SSNDIPSKFLLYQESVQMPKGDISYLHKFFLMYIGGRVPLHFQEDFCGTALLSTEWLRTD 347
            +SND+PSKFLLYQ+SVQ PKGDISYL KFFL+Y+GGR+PLHFQEDFCGTALLSTEWLR+D
Sbjct: 68   ASNDVPSKFLLYQQSVQSPKGDISYLQKFFLLYVGGRLPLHFQEDFCGTALLSTEWLRSD 127

Query: 348  PRRTSVGVDLDLEALTWCLENNVNKIGADVYSRISLFHGNVLEPTEAKRVKLELHDLVNN 527
             RRT+VGVDLDLEAL WC+ NNVNKIGAD YSRISLFHGNVL+P++A+ V+ E  DL++N
Sbjct: 128  SRRTAVGVDLDLEALNWCMANNVNKIGADGYSRISLFHGNVLQPSDAELVRFEPQDLISN 187

Query: 528  VTLGENEGCSETTPQESSKDEVPSSSFDGGLLK-NSPLPARDIVCAFNYSCCCLHKRSEL 704
            + LGE    SE T  ES+     S+S     LK N  LPARDIVCAFNYSCCCLHKR++L
Sbjct: 188  IKLGEQGDNSENTALESALQVGSSASVSDKYLKRNFQLPARDIVCAFNYSCCCLHKRADL 247

Query: 705  VLYFKHVLTSLSKRGGIFVMDVYGGTSSEREIHLQRKFPNFTYIWEQAEFDIIQRTTRIS 884
            VLYFKHVL +LSK+GG+FVMD+YGGTSSE ++ LQR+FPNFTYIWEQAEF+II+R TRIS
Sbjct: 248  VLYFKHVLDALSKKGGLFVMDLYGGTSSEGKLRLQRRFPNFTYIWEQAEFNIIERKTRIS 307

Query: 885  LHFNLRKQQRKILHAFSYSWRLWSLPEIKDCMEEAGFKSVHFWIRQMPDTNDVKNSEAFT 1064
            LHF+L+KQQ+K+ HAFSYSWRLWSLPEI+DC+EEAGFKS+HFW+R+MPD+ D ++ E F 
Sbjct: 308  LHFHLQKQQKKLRHAFSYSWRLWSLPEIRDCLEEAGFKSIHFWLRRMPDSKDNRSVEGFG 367

Query: 1065 VGRDVKYEEVSTFQQEDAWNAYVVGVA 1145
             GRD+KYEEV TF+QED+WNAY+V VA
Sbjct: 368  FGRDIKYEEVKTFEQEDSWNAYIVAVA 394


>emb|CBI28342.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score =  498 bits (1282), Expect = e-138
 Identities = 236/326 (72%), Positives = 275/326 (84%)
 Frame = +3

Query: 171  SNDIPSKFLLYQESVQMPKGDISYLHKFFLMYIGGRVPLHFQEDFCGTALLSTEWLRTDP 350
            ++D+PSKFLLYQ+SVQ PKGDISYL KFFLMY+GGRVPLH QEDFCGTALLSTEWLR+DP
Sbjct: 52   TDDMPSKFLLYQQSVQSPKGDISYLQKFFLMYVGGRVPLHLQEDFCGTALLSTEWLRSDP 111

Query: 351  RRTSVGVDLDLEALTWCLENNVNKIGADVYSRISLFHGNVLEPTEAKRVKLELHDLVNNV 530
            RRT+VG+DLD+EAL WC+ENNVNKIGAD YSR+SLFHGNVL+P E+K VK +L D++ N 
Sbjct: 112  RRTAVGLDLDVEALDWCMENNVNKIGADGYSRLSLFHGNVLQPLESKLVKSQLSDIIRNF 171

Query: 531  TLGENEGCSETTPQESSKDEVPSSSFDGGLLKNSPLPARDIVCAFNYSCCCLHKRSELVL 710
            TL ++   S T                  + +N  LPARDIVCAFNYSCCCLHKR ELVL
Sbjct: 172  TLEDSIADSGTI-----------------IKRNFGLPARDIVCAFNYSCCCLHKRGELVL 214

Query: 711  YFKHVLTSLSKRGGIFVMDVYGGTSSEREIHLQRKFPNFTYIWEQAEFDIIQRTTRISLH 890
            YFKHVL  LSK+GGIFVMD+YGGTSSE ++ LQR+FPNFTY WEQAEFDIIQR TRISLH
Sbjct: 215  YFKHVLDVLSKKGGIFVMDLYGGTSSECKLRLQRRFPNFTYYWEQAEFDIIQRKTRISLH 274

Query: 891  FNLRKQQRKILHAFSYSWRLWSLPEIKDCMEEAGFKSVHFWIRQMPDTNDVKNSEAFTVG 1070
            F+L+KQQRK+ HAFSYSWRLWSLPEIKDC+EEAGF SVHFWIRQMPDT + +++E F +G
Sbjct: 275  FHLQKQQRKLRHAFSYSWRLWSLPEIKDCLEEAGFHSVHFWIRQMPDTEENRSTEGFGIG 334

Query: 1071 RDVKYEEVSTFQQEDAWNAYVVGVAK 1148
            +DVKYEEV++FQQ+DAWNAY+VGV K
Sbjct: 335  QDVKYEEVASFQQQDAWNAYIVGVVK 360


>ref|XP_002306230.1| predicted protein [Populus trichocarpa] gi|222849194|gb|EEE86741.1|
            predicted protein [Populus trichocarpa]
          Length = 406

 Score =  496 bits (1278), Expect = e-138
 Identities = 240/358 (67%), Positives = 281/358 (78%), Gaps = 1/358 (0%)
 Frame = +3

Query: 75   DSDPDQESVTVLPXXXXXXXXXXNDNDGTHSSSNDIPSKFLLYQESVQMPKGDISYLHKF 254
            D +P+ +                 D D   +S  D+PSKFLLYQ+SVQ PKGDISYL KF
Sbjct: 48   DQEPEHDDSNEEEEKEEVEEEEEEDADDKTASKKDMPSKFLLYQQSVQSPKGDISYLQKF 107

Query: 255  FLMYIGGRVPLHFQEDFCGTALLSTEWLRTDPRRTSVGVDLDLEALTWCLENNVNKIGAD 434
            FLMY+GGR+PLH QEDFCGTALLSTEWLR D RRT+VGVDLDLEAL WC+ENN++K+GAD
Sbjct: 108  FLMYVGGRLPLHLQEDFCGTALLSTEWLRNDSRRTAVGVDLDLEALDWCIENNMDKVGAD 167

Query: 435  VYSRISLFHGNVLEPTEAKRVKLELHDLVNNVTLGENEGCSETTPQESSKDEVPSSSFDG 614
             YSRISLFHGNVL+P EAK V  E  +++NN+   + +  SE+   +S+     S+S D 
Sbjct: 168  GYSRISLFHGNVLQPLEAKLVNFESQEIINNIRSKDCKDDSESNELKSAVQVGSSTSTDD 227

Query: 615  GLLK-NSPLPARDIVCAFNYSCCCLHKRSELVLYFKHVLTSLSKRGGIFVMDVYGGTSSE 791
              +K N  L  RDIVCAFNYSCCCLHKR+ELVLYFKHVL  LSK+GGIFVMD+YGGTSSE
Sbjct: 228  MYMKRNVQLVPRDIVCAFNYSCCCLHKRAELVLYFKHVLGVLSKKGGIFVMDLYGGTSSE 287

Query: 792  REIHLQRKFPNFTYIWEQAEFDIIQRTTRISLHFNLRKQQRKILHAFSYSWRLWSLPEIK 971
             ++ LQR+FPNFTYIWEQAEFDII R TRISLHF+L+KQQRK+ HAFSYSWRLWSLPEIK
Sbjct: 288  SKLRLQRRFPNFTYIWEQAEFDIIGRKTRISLHFHLQKQQRKLRHAFSYSWRLWSLPEIK 347

Query: 972  DCMEEAGFKSVHFWIRQMPDTNDVKNSEAFTVGRDVKYEEVSTFQQEDAWNAYVVGVA 1145
            DC+EEAGF+SVHFWIRQMPDT   + +E F  GRD+KYEEV TF+QEDAWNAY+V VA
Sbjct: 348  DCLEEAGFQSVHFWIRQMPDTEANRRTEGFGAGRDIKYEEVKTFEQEDAWNAYIVAVA 405


>ref|XP_003606128.1| hypothetical protein MTR_4g053410 [Medicago truncatula]
            gi|355507183|gb|AES88325.1| hypothetical protein
            MTR_4g053410 [Medicago truncatula]
          Length = 388

 Score =  493 bits (1270), Expect = e-137
 Identities = 227/334 (67%), Positives = 280/334 (83%)
 Frame = +3

Query: 144  NDNDGTHSSSNDIPSKFLLYQESVQMPKGDISYLHKFFLMYIGGRVPLHFQEDFCGTALL 323
            NDN+  H S +D+PSKFLLYQ+SVQ PKGDISYL KFFLMY+GGRVPLH QEDFCGTALL
Sbjct: 56   NDNNDQHPS-HDMPSKFLLYQQSVQSPKGDISYLQKFFLMYVGGRVPLHLQEDFCGTALL 114

Query: 324  STEWLRTDPRRTSVGVDLDLEALTWCLENNVNKIGADVYSRISLFHGNVLEPTEAKRVKL 503
            S EWLR+DPR+T+VG+DLDLEAL WCLENN+ KIGAD +SRISLFHGNVL+P ++K VK+
Sbjct: 115  SAEWLRSDPRKTAVGLDLDLEALNWCLENNIPKIGADGFSRISLFHGNVLQPLQSKLVKI 174

Query: 504  ELHDLVNNVTLGENEGCSETTPQESSKDEVPSSSFDGGLLKNSPLPARDIVCAFNYSCCC 683
            +  +LV N++L +N    +T   ES      ++  D   + N  L  RDIVCAFNYSCCC
Sbjct: 175  DPEELVRNISLSQNTENLQTDVIESDVPTSSAAQDDELTMNNFTLSGRDIVCAFNYSCCC 234

Query: 684  LHKRSELVLYFKHVLTSLSKRGGIFVMDVYGGTSSEREIHLQRKFPNFTYIWEQAEFDII 863
            LHKR+ELVLYFKH   +LSK+GGIFVMD+YGGTSSE  + LQR+FPNFTY+WEQAEFDII
Sbjct: 235  LHKRAELVLYFKHARDALSKKGGIFVMDLYGGTSSENTLKLQRRFPNFTYVWEQAEFDII 294

Query: 864  QRTTRISLHFNLRKQQRKILHAFSYSWRLWSLPEIKDCMEEAGFKSVHFWIRQMPDTNDV 1043
            QR TRISLHF+L+K++RKI HAFSYSWRLW+LPEI+DC+EEAGF++VHFW+R+MPD+ ++
Sbjct: 295  QRKTRISLHFHLKKEKRKIRHAFSYSWRLWTLPEIRDCLEEAGFRAVHFWVREMPDSTEI 354

Query: 1044 KNSEAFTVGRDVKYEEVSTFQQEDAWNAYVVGVA 1145
              +E F VG+D+KYEE ++FQQ+D+WNAY+VGVA
Sbjct: 355  TRTEGFGVGKDIKYEEATSFQQQDSWNAYIVGVA 388


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