BLASTX nr result

ID: Coptis24_contig00020417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020417
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g...    82   3e-14
emb|CBI36110.3| unnamed protein product [Vitis vinifera]               82   3e-14
ref|XP_004171650.1| PREDICTED: LOW QUALITY PROTEIN: probable pep...    78   6e-13
ref|XP_004151437.1| PREDICTED: probable peptide transporter At1g...    78   6e-13
ref|XP_002516008.1| nitrate transporter, putative [Ricinus commu...    78   6e-13

>ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g52190-like [Vitis
           vinifera]
          Length = 584

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
 Frame = -2

Query: 243 SYVGRFQVIAMGXXXXXXXXXXXXLTAMIPQAKPPMGE-------SPNSGQLALLFSSFV 85
           SY+GRF  I +G            LTAMIP+ KPP  +       +P + Q  LL+SSF 
Sbjct: 83  SYLGRFLTIGLGSITSLLGMILLWLTAMIPKTKPPHCDLLTQSCKAPTAAQFILLYSSFA 142

Query: 84  LMSIGAGGIRPCSIAFGADQLIRKEDNP 1
           LMSIGAGG+RPCS+AFGADQL  K DNP
Sbjct: 143 LMSIGAGGVRPCSLAFGADQL-DKRDNP 169


>emb|CBI36110.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
 Frame = -2

Query: 243 SYVGRFQVIAMGXXXXXXXXXXXXLTAMIPQAKPPMGE-------SPNSGQLALLFSSFV 85
           SY+GRF  I +G            LTAMIP+ KPP  +       +P + Q  LL+SSF 
Sbjct: 83  SYLGRFLTIGLGSITSLLGMILLWLTAMIPKTKPPHCDLLTQSCKAPTAAQFILLYSSFA 142

Query: 84  LMSIGAGGIRPCSIAFGADQLIRKEDNP 1
           LMSIGAGG+RPCS+AFGADQL  K DNP
Sbjct: 143 LMSIGAGGVRPCSLAFGADQL-DKRDNP 169


>ref|XP_004171650.1| PREDICTED: LOW QUALITY PROTEIN: probable peptide transporter
           At1g52190-like [Cucumis sativus]
          Length = 582

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 45/81 (55%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
 Frame = -2

Query: 243 SYVGRFQVIAMGXXXXXXXXXXXXLTAMIPQAKPP----MGE---SPNSGQLALLFSSFV 85
           SY+GRF+VIAMG            LTA+ P+A+PP     GE   S N+ QL LL+ +F+
Sbjct: 85  SYLGRFKVIAMGTVVTLVGMVXLWLTAIFPKARPPHCTPAGEFCVSANTAQLMLLYFAFL 144

Query: 84  LMSIGAGGIRPCSIAFGADQL 22
           LM+ GAGGIRPCS+AFGADQL
Sbjct: 145 LMAAGAGGIRPCSLAFGADQL 165


>ref|XP_004151437.1| PREDICTED: probable peptide transporter At1g52190-like [Cucumis
           sativus]
          Length = 582

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
 Frame = -2

Query: 243 SYVGRFQVIAMGXXXXXXXXXXXXLTAMIPQAKPP----MGE---SPNSGQLALLFSSFV 85
           SY+GRF+VIAMG            LTA+ P+A+PP     GE   S N+ QL LL+ +F+
Sbjct: 85  SYLGRFKVIAMGTVVTLVGMVVLWLTAIFPKARPPHCTPAGEFCVSANTAQLMLLYFAFL 144

Query: 84  LMSIGAGGIRPCSIAFGADQL 22
           LM+ GAGGIRPCS+AFGADQL
Sbjct: 145 LMAAGAGGIRPCSLAFGADQL 165


>ref|XP_002516008.1| nitrate transporter, putative [Ricinus communis]
           gi|223544913|gb|EEF46428.1| nitrate transporter,
           putative [Ricinus communis]
          Length = 612

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
 Frame = -2

Query: 243 SYVGRFQVIAMGXXXXXXXXXXXXLTAMIPQAKPPMGE-------SPNSGQLALLFSSFV 85
           SY+GR+  I +G            LT MIPQ+KPP+ +       SP +GQ+ +L SS  
Sbjct: 95  SYLGRYLTIGLGSIFSLLGTVLLWLTTMIPQSKPPLCDLMTQNCKSPTAGQITMLLSSMA 154

Query: 84  LMSIGAGGIRPCSIAFGADQLIRKED 7
            +SIGAGGIRPCS+AFGADQL  K +
Sbjct: 155 FISIGAGGIRPCSLAFGADQLDNKSN 180


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