BLASTX nr result

ID: Coptis24_contig00020412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020412
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274374.1| PREDICTED: zinc finger protein ZAT5 [Vitis v...   248   7e-64
ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis v...   236   4e-60
emb|CBI17130.3| unnamed protein product [Vitis vinifera]              234   2e-59
emb|CAN59833.1| hypothetical protein VITISV_017619 [Vitis vinifera]   229   6e-58
ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|2...   225   9e-57

>ref|XP_002274374.1| PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
          Length = 296

 Score =  248 bits (634), Expect = 7e-64
 Identities = 136/248 (54%), Positives = 163/248 (65%), Gaps = 10/248 (4%)
 Frame = +2

Query: 2   GDGHIYGYQSPTNSVXXXXXXXXXXDMANCLILLARGHNTDVSKRIDDHVGAMEKFSSRR 181
           G G      SPT+S           DMANCLILLA+G    +  R  +  GA+EK SS  
Sbjct: 53  GGGDYSSISSPTSSGEVLESTEEEEDMANCLILLAQG----LGPRQIEEGGAVEKLSSPS 108

Query: 182 FAEAPTTTTSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKK---TLMLLED 352
           F E  TTT  KAGFYVY+CKTCNR F SFQALGGHRASHKKPKA+V EKK        +D
Sbjct: 109 FTEMATTTAGKAGFYVYECKTCNRTFPSFQALGGHRASHKKPKAVVEEKKGPAATASWDD 168

Query: 353 DT----QFNNNISSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPT 520
           D     QFN     ++LQ+GN  + H++NKSKVHECSICGSEFSSGQALGGHMRRHR+ T
Sbjct: 169 DYYEEGQFNKISPPLSLQIGNNKALHSSNKSKVHECSICGSEFSSGQALGGHMRRHRSNT 228

Query: 521 TANMTNSIAMDTIMTESQDTKKPRNALSLDLNLPAPEED---RESKFSFASKQHSLLFSA 691
           +  +T S+    + +     K+PRN L LDLNLPAPE++   R+SKF F S Q  L+FSA
Sbjct: 229 STRITMSMDAGKMDSHDHHKKEPRNVLPLDLNLPAPEDELHHRDSKFQFTSNQQHLVFSA 288

Query: 692 SSLVDCHF 715
            +LVDCH+
Sbjct: 289 PALVDCHY 296


>ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
           gi|147788170|emb|CAN64839.1| hypothetical protein
           VITISV_030377 [Vitis vinifera]
          Length = 276

 Score =  236 bits (602), Expect = 4e-60
 Identities = 130/216 (60%), Positives = 156/216 (72%), Gaps = 3/216 (1%)
 Frame = +2

Query: 77  DMANCLILLARGHNTDVSKRIDDHVGAMEKFSSRRFAEAPTTTTSKA-GFYVYQCKTCNR 253
           DMANCLILLA+G +  V+                    A   T+SKA GFYVYQCKTC R
Sbjct: 82  DMANCLILLAQGQSRKVA------------------VPAAAATSSKATGFYVYQCKTCYR 123

Query: 254 CFSSFQALGGHRASHKKPKAMVGEKKTLMLLEDD-TQFNNNISSINLQMGNRTSSHTTNK 430
           CF SFQALGGHRASHK+PKA+  EK+T  L+ED+  QFN+N ++++LQ+ NR   ++ NK
Sbjct: 124 CFPSFQALGGHRASHKRPKAVTEEKRTWALMEDEYDQFNHNSTALSLQIPNR-GLYSNNK 182

Query: 431 SKVHECSICGSEFSSGQALGGHMRRHRTPTTANMTNSIAMDTIMTESQDTKKPRNALSLD 610
           SKVHECSICG+EFSSGQALGGHMRRHRT T    T  + M T   ESQ+ KKPRN L LD
Sbjct: 183 SKVHECSICGAEFSSGQALGGHMRRHRTFTGPPPT--MPMATSSPESQEAKKPRNILQLD 240

Query: 611 LNLPAPEED-RESKFSFASKQHSLLFSASSLVDCHF 715
           LNLPAPE+D RESKF FA+K+ +L+FSAS LVDCH+
Sbjct: 241 LNLPAPEDDHRESKFPFATKEQALVFSASPLVDCHY 276


>emb|CBI17130.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  234 bits (596), Expect = 2e-59
 Identities = 127/241 (52%), Positives = 153/241 (63%), Gaps = 3/241 (1%)
 Frame = +2

Query: 2   GDGHIYGYQSPTNSVXXXXXXXXXXDMANCLILLARGHNTDVSKRIDDHVGAMEKFSSRR 181
           G G      SPT+S           DMANCLILLA+G    +  R  +  GA+EK SS  
Sbjct: 11  GGGDYSSISSPTSSGEVLESTEEEEDMANCLILLAQG----LGPRQIEEGGAVEKLSSPS 66

Query: 182 FAEAPTTTTSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKKTLMLLEDDTQ 361
           F E  TTT  KAGFYVY+CKTCNR F SFQALGGHRASHKKPKA+               
Sbjct: 67  FTEMATTTAGKAGFYVYECKTCNRTFPSFQALGGHRASHKKPKAIS-------------- 112

Query: 362 FNNNISSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANMTNS 541
                  ++LQ+GN  + H++NKSKVHECSICGSEFSSGQALGGHMRRHR+ T+  +T S
Sbjct: 113 -----PPLSLQIGNNKALHSSNKSKVHECSICGSEFSSGQALGGHMRRHRSNTSTRITMS 167

Query: 542 IAMDTIMTESQDTKKPRNALSLDLNLPAPEED---RESKFSFASKQHSLLFSASSLVDCH 712
           +    + +     K+PRN L LDLNLPAPE++   R+SKF F S Q  L+FSA +LVDCH
Sbjct: 168 MDAGKMDSHDHHKKEPRNVLPLDLNLPAPEDELHHRDSKFQFTSNQQHLVFSAPALVDCH 227

Query: 713 F 715
           +
Sbjct: 228 Y 228


>emb|CAN59833.1| hypothetical protein VITISV_017619 [Vitis vinifera]
          Length = 308

 Score =  229 bits (583), Expect = 6e-58
 Identities = 118/198 (59%), Positives = 141/198 (71%), Gaps = 10/198 (5%)
 Frame = +2

Query: 152 GAMEKFSSRRFAEAPTTTTSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKK 331
           GA+EK SS  F E  TTT  KAGFYVY+CKTCNR F SFQALGGHRASHKKPKA+V EKK
Sbjct: 111 GAVEKLSSPSFTEMATTTAGKAGFYVYECKTCNRTFPSFQALGGHRASHKKPKAVVEEKK 170

Query: 332 ---TLMLLEDDT----QFNNNISSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALG 490
                   +DD     QFN     ++LQ+GN  + H++NKSKVHECSICGSEFSSGQALG
Sbjct: 171 GPAATAXWDDDYYEEGQFNKISPPLSLQIGNNKALHSSNKSKVHECSICGSEFSSGQALG 230

Query: 491 GHMRRHRTPTTANMTNSIAMDTIMTESQDTKKPRNALSLDLNLPAPEED---RESKFSFA 661
           GHMRRHR+ T+  +T S+    + +     K+PRN L LDLNLPAPE++   R+SKF F 
Sbjct: 231 GHMRRHRSNTSTRITMSMDAGKMXSHDHHKKEPRNVLPLDLNLPAPEDELHHRDSKFQFT 290

Query: 662 SKQHSLLFSASSLVDCHF 715
           S Q  L+FSA +LVDCH+
Sbjct: 291 SNQQHLVFSAPALVDCHY 308


>ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|222849952|gb|EEE87499.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  225 bits (573), Expect = 9e-57
 Identities = 131/253 (51%), Positives = 166/253 (65%), Gaps = 24/253 (9%)
 Frame = +2

Query: 29  SPTNSVXXXXXXXXXXDMANCLILLARGHNTDVS-KRIDDHVGA-MEKFSSRRFAEAPTT 202
           SPT S           DMANCLILLA+G   DV  K+I ++ G+ +EKFS+R+F++    
Sbjct: 64  SPTTSSEVCESTEEEEDMANCLILLAQG---DVPPKQIHENKGSKVEKFSARKFSDMSAP 120

Query: 203 TTSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKKTLMLLE-----DDTQFN 367
           T +KAGF+VY+CKTCNRCF SFQALGGHRASHK+PKA   E+K  +++      DD Q N
Sbjct: 121 TINKAGFFVYECKTCNRCFPSFQALGGHRASHKRPKATAPEEKKGLVVASMEDLDDRQLN 180

Query: 368 NN--ISSINLQMGNRTS---SHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANM 532
                  ++LQ+ N  +       NK+K+HECSICGSEF SGQALGGHMRRHR  T AN 
Sbjct: 181 KRSPYPCLSLQIPNNNNVNKGFQANKAKIHECSICGSEFMSGQALGGHMRRHRANTGANQ 240

Query: 533 TNSIAMD--TIMTESQ------DTKKPRNALSLDLNLPAPEED----RESKFSFASKQHS 676
            ++I+ D  +  TES+       T KPRN L+LDLNLPAP ED    RESKF  +S Q  
Sbjct: 241 VSNISTDSSSATTESKIHGDHHHTIKPRNMLALDLNLPAPPEDDHHLRESKFQLSSTQQP 300

Query: 677 LLFSASSLVDCHF 715
           L+FS+ +LVDCH+
Sbjct: 301 LVFSSPALVDCHY 313


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