BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020395
         (1550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun...   541   e-151
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...   523   e-146
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]   523   e-146
ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|2...   509   e-142
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop...   456   e-125

>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 492

 Score =  541 bits (1395), Expect = e-151
 Identities = 252/409 (61%), Positives = 322/409 (78%), Gaps = 1/409 (0%)
 Frame = -2

Query: 1549 DALCLGPSFATMSEDFFIVLRNVLQNRSEVSELHCVKDAKAPLMCFKLNGISIDLPYAQL 1370
            DA+C+GP FAT++EDFFIVLRN+L+NR EVS +HCVKDAK PLM FK +GISIDLPYAQL
Sbjct: 82   DAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDAKVPLMRFKFDGISIDLPYAQL 141

Query: 1369 DILTVPDNIDILNPIS-RGIEETSWKNLSGVRANLRILQLVPNVEEFQSLLRCLRFWAQR 1193
             +L VPDN+D+LNP     I+ETSWK+LSGVRAN RILQ VPN+E FQS+LRC++ WA+R
Sbjct: 142  KVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQFVPNLENFQSMLRCIKLWARR 201

Query: 1192 RGIYCSVVGFFGGIHIAVLTAYVCQRHPNASVSSLMSIFFETFALWPWPTPVLLVEEMLP 1013
            RG+  ++ GF GG+H+A+L+A VCQ++PNASVS+L+S FF T+A WPWPTPV+L + M  
Sbjct: 202  RGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNFFATYATWPWPTPVMLQDGMSS 261

Query: 1012 VSGEVAEIGSLMPIELPCSPHEFCHSNITKSTFQRIRAEFLRGHAHTEDILRPDFEWSSL 833
             + +  E  S MPI LPCSPHE+CHSNITKST+ RIR EFLRGH+ T+D+L+PDF+W+ +
Sbjct: 262  PAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYRIRTEFLRGHSLTKDLLKPDFDWNGI 321

Query: 832  FDTFPYSKKYRRFVRILLAASNQGELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVYVD 653
            F+ FPYSKKY RFV+I L+A +Q E+G+WVGWVKSRFR LLLKLE +QG CDP+P  Y D
Sbjct: 322  FEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVKSRFRALLLKLEGLQGQCDPSPVEYAD 381

Query: 652  PDLGIPNTVFYWGLQPGRTNFRDAGLVEEYFMKHITNGYQGSIATLELSIVDSAQLPKDT 473
             D+  PN VFYWGL P R+N+ D   VEE F+++I +GY G+   LELSIV +A+LPK+ 
Sbjct: 382  RDVSEPNVVFYWGLNPSRSNYIDLESVEEDFLRNIYSGYHGTRRKLELSIVKAAELPKNA 441

Query: 472  HFDSVNGNASKGYWRMFDCNQHRIPIYSDYLPDYVVGYMAINGDSEHPT 326
             F+S NG   K YW++ D  + R P YS +LP Y VGY+A NGD+E P+
Sbjct: 442  QFNSGNGKKMKAYWKVVD-KEQRTPAYSQHLPGYFVGYLATNGDTECPS 489


>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
            gi|296083219|emb|CBI22855.3| unnamed protein product
            [Vitis vinifera]
          Length = 563

 Score =  523 bits (1348), Expect = e-146
 Identities = 244/407 (59%), Positives = 322/407 (79%), Gaps = 2/407 (0%)
 Frame = -2

Query: 1549 DALCLGPSFATMSEDFFIVLRNVLQNRSEVSELHCVKDAKAPLMCFKLNGISIDLPYAQL 1370
            DALC+GP FA+M++DFFIVLRN+L++R EVSE+HCVKDAK PLM FK +GIS+DLPYAQL
Sbjct: 152  DALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFDGISVDLPYAQL 211

Query: 1369 DILTVPDNIDILNP-ISRGIEETSWKNLSGVRANLRILQLVPNVEEFQSLLRCLRFWAQR 1193
             +L VP+N+++LNP   R I+ETSWK+LSGVRAN  ILQLVPNVE FQS+LRC++ WA+R
Sbjct: 212  KLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQSILRCIKLWAKR 271

Query: 1192 RGIYCSVVGFFGGIHIAVLTAYVCQRHPNASVSSLMSIFFETFALWPWPTPVLLVEEMLP 1013
            RG+Y ++ G+FGG+H+A+L A+VCQ++P+A+++ LMS FF+TF+ WPWPTPV L +  LP
Sbjct: 272  RGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPVALEDGRLP 331

Query: 1012 VSGEVAEIGSLMPIELPCSPHEFCHSNITKSTFQRIRAEFLRGHAHTEDILRPDFEWSSL 833
              G   E  +LMPI+LPCSP+ +CHSNITKSTF RI  E   GHA T D+LR DF+W+ +
Sbjct: 332  TGG-TRETRALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGHALTRDLLRLDFDWNDI 390

Query: 832  FDTFPYSKKYRRFVRILLAASNQGELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVYVD 653
            F+ F YSKKY RF++I L++SNQ ELG+WVGWVKSRFR LL K+EEVQGLCDPNPT ++D
Sbjct: 391  FEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEEVQGLCDPNPTEFID 450

Query: 652  PDLGIPNTVFYWGLQPGRTNFRDAGLVEEYFMKHITN-GYQGSIATLELSIVDSAQLPKD 476
            PD G PN VF+WG+QPGR NF D  +VE+ FM++I N GYQG    + LS++ ++QLP  
Sbjct: 451  PDAGGPNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 510

Query: 475  THFDSVNGNASKGYWRMFDCNQHRIPIYSDYLPDYVVGYMAINGDSE 335
               D+ + N +K  WRMF+ +Q R+P++S +LP Y VGY A + D++
Sbjct: 511  AQLDTGSRNRTKACWRMFNYHQPRVPVFSQHLPLYFVGYAATDKDAK 557


>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score =  523 bits (1348), Expect = e-146
 Identities = 244/407 (59%), Positives = 322/407 (79%), Gaps = 2/407 (0%)
 Frame = -2

Query: 1549 DALCLGPSFATMSEDFFIVLRNVLQNRSEVSELHCVKDAKAPLMCFKLNGISIDLPYAQL 1370
            DALC+GP FA+M++DFFIVLRN+L++R EVSE+HCVKDAK PLM FK +GIS+DLPYAQL
Sbjct: 193  DALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFDGISVDLPYAQL 252

Query: 1369 DILTVPDNIDILNP-ISRGIEETSWKNLSGVRANLRILQLVPNVEEFQSLLRCLRFWAQR 1193
             +L VP+N+++LNP   R I+ETSWK+LSGVRAN  ILQLVPNVE FQS+LRC++ WA+R
Sbjct: 253  KLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQSILRCIKLWAKR 312

Query: 1192 RGIYCSVVGFFGGIHIAVLTAYVCQRHPNASVSSLMSIFFETFALWPWPTPVLLVEEMLP 1013
            RG+Y ++ G+FGG+H+A+L A+VCQ++P+A+++ LMS FF+TF+ WPWPTPV L +  LP
Sbjct: 313  RGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPVALEDGRLP 372

Query: 1012 VSGEVAEIGSLMPIELPCSPHEFCHSNITKSTFQRIRAEFLRGHAHTEDILRPDFEWSSL 833
              G   E  +LMPI+LPCSP+ +CHSNITKSTF RI  E   GHA T D+LR DF+W+ +
Sbjct: 373  TGG-TRETRALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGHALTRDLLRLDFDWNDI 431

Query: 832  FDTFPYSKKYRRFVRILLAASNQGELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVYVD 653
            F+ F YSKKY RF++I L++SNQ ELG+WVGWVKSRFR LL K+EEVQGLCDPNPT ++D
Sbjct: 432  FEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEEVQGLCDPNPTEFID 491

Query: 652  PDLGIPNTVFYWGLQPGRTNFRDAGLVEEYFMKHITN-GYQGSIATLELSIVDSAQLPKD 476
            PD G PN VF+WG+QPGR NF D  +VE+ FM++I N GYQG    + LS++ ++QLP  
Sbjct: 492  PDAGEPNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 551

Query: 475  THFDSVNGNASKGYWRMFDCNQHRIPIYSDYLPDYVVGYMAINGDSE 335
               D+ + N +K  WRMF+ +Q R+P++S +LP Y VGY A + D++
Sbjct: 552  AXLDTGSRNRTKACWRMFNYHQPRVPVFSQHLPLYFVGYAATDKDAK 598


>ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|222851196|gb|EEE88743.1|
            predicted protein [Populus trichocarpa]
          Length = 483

 Score =  509 bits (1311), Expect = e-142
 Identities = 245/411 (59%), Positives = 305/411 (74%), Gaps = 3/411 (0%)
 Frame = -2

Query: 1549 DALCLGPSFATMSEDFFIVLRNVLQNRSEVSELHCVKDAKAPLMCFKLNGISIDLPYAQL 1370
            DALC+GP FAT++EDFFIVL N+L++R E+SE+HCVKD+K PLM F  +GIS+DLPYAQL
Sbjct: 70   DALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDGISVDLPYAQL 129

Query: 1369 DILTVPDNIDILN-PISRGIEETSWKNLSGVRANLRILQLVPNVEEFQSLLRCLRFWAQR 1193
             +L VP+N+DILN  +   I+ETSWK+LSGVRAN RIL LVPN+  FQS+LRCL+ WA+R
Sbjct: 130  KVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSMLRCLKLWAKR 189

Query: 1192 RGIYCSVVGFFGGIHIAVLTAYVCQRHPNASVSSLMSIFFETFALWPWPTPVLLVEEMLP 1013
            RG+Y ++ GF GG+H+AVL A+VCQ  PNASV +L+S FF T+A+WPWPTPV+L + M  
Sbjct: 190  RGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTPVMLQDGMSS 249

Query: 1012 VSGEVAEIGSLMPIELPCSPHEFCHSNITKSTFQRIRAEFLRGHAHTEDI--LRPDFEWS 839
               +V E    MPI LPCSP+E+CHSN+TKSTF +IRAEFLRGH+ T D+  L+ D +  
Sbjct: 250  NVEDVIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRGHSMTRDLLKLKLDSDVG 309

Query: 838  SLFDTFPYSKKYRRFVRILLAASNQGELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVY 659
             +F+ FPYS  Y RFV+I L+A +Q ELG+WVGWVKS FRCLLLKLE VQG CDPNP  Y
Sbjct: 310  RIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLKLEAVQGFCDPNPMEY 369

Query: 658  VDPDLGIPNTVFYWGLQPGRTNFRDAGLVEEYFMKHITNGYQGSIATLELSIVDSAQLPK 479
            VD D   PN VFYWGL   R NF     VEE F + I  GY G    +ELSIV +++LPK
Sbjct: 370  VDMDASEPNVVFYWGLNRSRCNFVYIEPVEEDFSRSIYCGYYGIRGKMELSIVQASELPK 429

Query: 478  DTHFDSVNGNASKGYWRMFDCNQHRIPIYSDYLPDYVVGYMAINGDSEHPT 326
            +  FDS NG   K  W+M D NQ R P YS +LP Y VGY+  NGD+E+P+
Sbjct: 430  NARFDSGNGKKMKACWKMLDYNQRRTPAYSQHLPSYFVGYVESNGDTEYPS 480


>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
            gi|297328320|gb|EFH58739.1| polynucleotide
            adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  456 bits (1172), Expect = e-125
 Identities = 221/402 (54%), Positives = 299/402 (74%), Gaps = 5/402 (1%)
 Frame = -2

Query: 1549 DALCLGPSFATMSEDFFIVLRNVLQNRSEVSELHCVKDAKAPLMCFKLNGISIDLPYAQL 1370
            DALC+GP FA++SEDFFI LR++L++R EVSE+HCVKDAK PL+ FK +GI +DLPYAQL
Sbjct: 96   DALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKDAKVPLIRFKFDGILVDLPYAQL 155

Query: 1369 DILTVPDNIDILNPIS-RGIEETSWKNLSGVRANLRILQLVPNVEEFQSLLRCLRFWAQR 1193
             +L++P+N+D+LNP   R I+ETSWK+LSGVRAN  ILQLVP++E FQSLLRC++ WA+R
Sbjct: 156  RVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKR 215

Query: 1192 RGIYCSVVGFFGGIHIAVLTAYVCQRHPNASVSSLMSIFFETFALWPWPTPVLLVEEMLP 1013
            RG+Y ++ GF GG+H+A+L A+VC    NA++SSL++ FF  FA W WPTPV+L+E+  P
Sbjct: 216  RGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANFFYIFAHWQWPTPVVLLEDTYP 275

Query: 1012 VSGEVAEIGSLMPIELPCSPHEFCHSNITKSTFQRIRAEFLRGHAHTEDILRPDFEWSSL 833
             +G       LMPI+LPC  H++C+SNIT+STF +I AEFLRGH  T+D L+P+F W +L
Sbjct: 276  ATGAPP---GLMPIQLPCGSHQYCNSNITRSTFYKIMAEFLRGHNLTKDYLKPNFSWKNL 332

Query: 832  FDTFPYSKKYRRFVRILLAASNQGELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVYVD 653
            F+ +PY   Y  F +I L+A+NQ +L +WVGWVKSRFRCLL K+EEV G+CDPNPT YV+
Sbjct: 333  FELYPYENTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLSKIEEVYGICDPNPTEYVE 392

Query: 652  PDLGIPNTVFYWGLQPGRTNFRDAGLVEEYFMKHITNG-YQGSIATLELSIVDSAQLPKD 476
                 PN VFYWGLQ    N  D   VE  F+K++ +G +QG +  ++LS+V  +QLPK+
Sbjct: 393  TYTKQPNIVFYWGLQLRTINVSDIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLPKN 452

Query: 475  THFDSVNGN--ASKGYWRMFDCNQ-HRIPIYSDYLPDYVVGY 359
                S N +   +K  WR+ +  Q + +P+YS +LP YVVGY
Sbjct: 453  GECASNNRSKKVTKTCWRIRENKQCNNVPVYSHHLPGYVVGY 494