BLASTX nr result

ID: Coptis24_contig00020391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020391
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...    89   4e-16
ref|XP_002535825.1| conserved hypothetical protein [Ricinus comm...    78   8e-13
ref|XP_004134482.1| PREDICTED: uncharacterized protein LOC101209...    77   1e-12
ref|XP_004134476.1| PREDICTED: uncharacterized protein LOC101208...    77   2e-12
ref|XP_004159851.1| PREDICTED: uncharacterized LOC101208291 [Cuc...    76   2e-12

>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
 Frame = +2

Query: 56  QKRIVPSVDILKSLAPTDDRFTIILS--QVARVLYNVERVLGPNIAILRYHGVPESNISM 229
           Q +I+P +  LK + PTD +   +L+  +   V+Y     + PNI  LR HGVPESNI  
Sbjct: 128 QNQIIPCISFLKKVLPTDHKIASLLTAKRGTWVVYKFSEQMVPNIETLRSHGVPESNILR 187

Query: 230 SLMTSPQALCNKSARFHELLLEIKKMGFSPNTKFFMKGLSIRLQINKTTWEVKLVVFRSF 409
            L+  P+ L   +  F  +L  +K+MGF      F+ G+     + K  WE K+ VFRSF
Sbjct: 188 MLILRPRTLSFNADEFKAILKRVKEMGFDEKGMMFIHGMCALCGMKKAKWESKVSVFRSF 247

Query: 410 GW 415
           GW
Sbjct: 248 GW 249


>ref|XP_002535825.1| conserved hypothetical protein [Ricinus communis]
           gi|223521814|gb|EEF26558.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/120 (32%), Positives = 65/120 (54%)
 Frame = +2

Query: 56  QKRIVPSVDILKSLAPTDDRFTIILSQVARVLYNVERVLGPNIAILRYHGVPESNISMSL 235
           + RI+P++D L+ +  TD++    L +  R L +    +  N+  LR HGVPE NI    
Sbjct: 143 KNRILPTIDYLRGILETDEKVVWALKRCPRALRHGTDTMVSNVGTLRAHGVPEPNIRSLF 202

Query: 236 MTSPQALCNKSARFHELLLEIKKMGFSPNTKFFMKGLSIRLQINKTTWEVKLVVFRSFGW 415
           +  P  L  +   F++++ E+K+MGF P  K F+  L     ++++ W+ K  V  SFGW
Sbjct: 203 ILEPLTLLLRVDLFNQVVQEVKEMGFEPANKSFIYALRSMSVMSRSHWQRKKEVLMSFGW 262


>ref|XP_004134482.1| PREDICTED: uncharacterized protein LOC101209993 [Cucumis sativus]
          Length = 371

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
 Frame = +2

Query: 59  KRIVPSVDILKSLAPTDDRFTIILSQVARVL-YNVERVLGPNIAILRYHGVPESNISMSL 235
           KRI+PS D ++++  ++++    + +   +L +++   +GPNI IL+  GVP+SNIS  L
Sbjct: 129 KRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYL 188

Query: 236 MTSPQALCNKSARFHELLLEIKKMGFSPNTKFFMKGLSIRLQINKTTWEVKLVVFRSFG 412
              P+     S RF E +  + +MGF+P    F+  +     + K+TW+ KL V+R +G
Sbjct: 189 QRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDKKLEVYRKWG 247


>ref|XP_004134476.1| PREDICTED: uncharacterized protein LOC101208291 [Cucumis sativus]
          Length = 370

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
 Frame = +2

Query: 59  KRIVPSVDILKSLAPTDDRFTIILSQVARVL-YNVERVLGPNIAILRYHGVPESNISMSL 235
           + I+P  D ++++  T ++    + +  R+L +N+   +GPNI IL+  GVP+SNIS  L
Sbjct: 128 QEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPDSNISTYL 187

Query: 236 MTSPQALCNKSARFHELLLEIKKMGFSPNTKFFMKGLSIRLQINKTTWEVKLVVFRSFG 412
              P+     S RF E++  + +MGF+P    F+  +     + K++W+ KL V+R +G
Sbjct: 188 QRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKLEVYRKWG 246


>ref|XP_004159851.1| PREDICTED: uncharacterized LOC101208291 [Cucumis sativus]
          Length = 370

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
 Frame = +2

Query: 59  KRIVPSVDILKSLAPTDDRFTIILSQVARVL-YNVERVLGPNIAILRYHGVPESNISMSL 235
           + I+P  D ++++  T ++    + +  R+L +N+   +GPNI IL+  GVP+SNIS  L
Sbjct: 128 QEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPDSNISTYL 187

Query: 236 MTSPQALCNKSARFHELLLEIKKMGFSPNTKFFMKGLSIRLQINKTTWEVKLVVFRSFG 412
              P+     S RF E++  + +MGF P    F+  +     + K++W+ KL V+R +G
Sbjct: 188 QRQPKVFSTSSIRFKEIVERVTEMGFDPQRLQFIVAVHALRSLTKSSWDKKLEVYRKWG 246


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