BLASTX nr result

ID: Coptis24_contig00020378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020378
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96928.1| hypothetical protein [Cleome spinosa]                  467   e-129
ref|XP_002530999.1| Mitochondrial carnitine/acylcarnitine carrie...   462   e-127
ref|XP_002306057.1| predicted protein [Populus trichocarpa] gi|2...   461   e-127
ref|XP_003633751.1| PREDICTED: solute carrier family 25 member 4...   458   e-126
ref|XP_003531869.1| PREDICTED: solute carrier family 25 member 4...   457   e-126

>gb|ABD96928.1| hypothetical protein [Cleome spinosa]
          Length = 321

 Score =  467 bits (1202), Expect = e-129
 Identities = 231/307 (75%), Positives = 261/307 (85%), Gaps = 1/307 (0%)
 Frame = -3

Query: 1285 EINWDKLDKTKFYVVGAGLFTGVTVALYPISVVKTRLQVATKDSVEKNAFSVIRGLLRSE 1106
            EINWDKLDKTKFYVVGAGLFTGVTVALYP+SVVKTRLQVA+KD  E+NAFSV++GLL++E
Sbjct: 15   EINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVASKDVAERNAFSVVKGLLKNE 74

Query: 1105 GIPGLYRGFGTVITGAVPARIIFLTALETTKVATFNMIEPFSFSEPTKAALANGLAGMTS 926
            GIPGLYRGFGTVITGA+PARIIFLTALETTK+A F ++EPF FSEPT+AA+ANG+AGMT+
Sbjct: 75   GIPGLYRGFGTVITGAIPARIIFLTALETTKIAAFKLVEPFKFSEPTQAAIANGIAGMTA 134

Query: 925  SLFSQAVFVPIDVVSQKLMVQGYSGYTKYNGGLDVARKIVKTDGIRGLYRGFGLSVMTYS 746
            SLFSQAVFVPIDVVSQKLMVQG+SG+  Y GGLDV RK++K+DG+RGLYRGFGLSVMTYS
Sbjct: 135  SLFSQAVFVPIDVVSQKLMVQGFSGHATYTGGLDVVRKVMKSDGVRGLYRGFGLSVMTYS 194

Query: 745  PSSAVWWATYGSSQRVIWRLLDRAAEQKEPFFGDWTVVLVQXXXXXXXXXXXSCVTTPLD 566
            PSSA WWA+YGSSQR+IWR L    E +        +VLVQ           S +TTPLD
Sbjct: 195  PSSAAWWASYGSSQRLIWRFLGYGGESEVAAPSQSKIVLVQACGGIIAGATASSITTPLD 254

Query: 565  TIKTRLQVMGH-GNRENARQVVKRLIVEDGWKGLYRGLGPRFVSMSVWGTSMITAYEYLK 389
            TIKTRLQVMGH   R +ARQVVK LI EDGWKGLYRGLGPRF SMS WGTSMI  YEYLK
Sbjct: 255  TIKTRLQVMGHQEERLSARQVVKNLIAEDGWKGLYRGLGPRFFSMSAWGTSMILTYEYLK 314

Query: 388  RVCAKED 368
            R+CAK++
Sbjct: 315  RLCAKDE 321


>ref|XP_002530999.1| Mitochondrial carnitine/acylcarnitine carrier protein, putative
            [Ricinus communis] gi|223529426|gb|EEF31387.1|
            Mitochondrial carnitine/acylcarnitine carrier protein,
            putative [Ricinus communis]
          Length = 339

 Score =  462 bits (1188), Expect = e-127
 Identities = 226/298 (75%), Positives = 256/298 (85%)
 Frame = -3

Query: 1285 EINWDKLDKTKFYVVGAGLFTGVTVALYPISVVKTRLQVATKDSVEKNAFSVIRGLLRSE 1106
            EINWDKLDKTKFY+VGAG+FTG+TVALYP+SVVKTRLQVATKD+VEK+AFSV+RGLLR++
Sbjct: 15   EINWDKLDKTKFYIVGAGIFTGITVALYPMSVVKTRLQVATKDTVEKSAFSVVRGLLRTD 74

Query: 1105 GIPGLYRGFGTVITGAVPARIIFLTALETTKVATFNMIEPFSFSEPTKAALANGLAGMTS 926
            GIPGLY+GFGTVITGA+PARIIFLTALETTKVA F M+EPF  S+P++AA ANG+AGMT+
Sbjct: 75   GIPGLYKGFGTVITGAIPARIIFLTALETTKVAAFKMVEPFKLSDPSQAAFANGIAGMTA 134

Query: 925  SLFSQAVFVPIDVVSQKLMVQGYSGYTKYNGGLDVARKIVKTDGIRGLYRGFGLSVMTYS 746
            SLFSQAVFVP+DVVSQKLMVQGYSG+ KYNGGLDVARKI+KTDGIRG YRGFGLSVMTYS
Sbjct: 135  SLFSQAVFVPVDVVSQKLMVQGYSGHAKYNGGLDVARKIMKTDGIRGFYRGFGLSVMTYS 194

Query: 745  PSSAVWWATYGSSQRVIWRLLDRAAEQKEPFFGDWTVVLVQXXXXXXXXXXXSCVTTPLD 566
            PSSAVWWA+YGSSQRVIW+LL    + +        ++LVQ           SC+TTPLD
Sbjct: 195  PSSAVWWASYGSSQRVIWKLLGHGTDVEAASPSQSRIMLVQASGGIIAGATASCITTPLD 254

Query: 565  TIKTRLQVMGHGNRENARQVVKRLIVEDGWKGLYRGLGPRFVSMSVWGTSMITAYEYL 392
            TIKTRLQVMG   + +ARQVVK LI +DGW GLYRG GPRF SMS WGTSMI AYEYL
Sbjct: 255  TIKTRLQVMGQERKSSARQVVKNLIKDDGWTGLYRGFGPRFFSMSAWGTSMILAYEYL 312


>ref|XP_002306057.1| predicted protein [Populus trichocarpa] gi|222849021|gb|EEE86568.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  461 bits (1187), Expect = e-127
 Identities = 225/309 (72%), Positives = 262/309 (84%)
 Frame = -3

Query: 1285 EINWDKLDKTKFYVVGAGLFTGVTVALYPISVVKTRLQVATKDSVEKNAFSVIRGLLRSE 1106
            EINWDKLDK+KFYVVGAG+FTG+TV LYP+SV+KTRLQVAT+DSVEK+A SVIRG+L+++
Sbjct: 10   EINWDKLDKSKFYVVGAGIFTGLTVGLYPVSVIKTRLQVATRDSVEKSASSVIRGILKTD 69

Query: 1105 GIPGLYRGFGTVITGAVPARIIFLTALETTKVATFNMIEPFSFSEPTKAALANGLAGMTS 926
            G+PGLYRGFGTVITGAVPARIIFLTALETTKV  F M+EPF+FSEPT+AALANG+AGM +
Sbjct: 70   GVPGLYRGFGTVITGAVPARIIFLTALETTKVTAFKMVEPFNFSEPTQAALANGIAGMAA 129

Query: 925  SLFSQAVFVPIDVVSQKLMVQGYSGYTKYNGGLDVARKIVKTDGIRGLYRGFGLSVMTYS 746
            SL SQAVFVPID++SQ+LMVQGYSG+ KYNGGLDVARKI++TDGIRG YRGFGLSVMTYS
Sbjct: 130  SLCSQAVFVPIDLISQRLMVQGYSGHEKYNGGLDVARKIIRTDGIRGFYRGFGLSVMTYS 189

Query: 745  PSSAVWWATYGSSQRVIWRLLDRAAEQKEPFFGDWTVVLVQXXXXXXXXXXXSCVTTPLD 566
            PSSAVWWA+YGSSQR+IWRLL +  +++E      T++LVQ           SC+TTPLD
Sbjct: 190  PSSAVWWASYGSSQRIIWRLLGQGTDREEAAPSKSTIMLVQATGGIIAGATASCITTPLD 249

Query: 565  TIKTRLQVMGHGNRENARQVVKRLIVEDGWKGLYRGLGPRFVSMSVWGTSMITAYEYLKR 386
            TIKTRLQVMGH  R +ARQ+V  LI +DGW G YRGLGPRFVSMS WGT+MI AYEYL  
Sbjct: 250  TIKTRLQVMGHERRSSARQIVTNLIRDDGWTGFYRGLGPRFVSMSAWGTTMILAYEYLIP 309

Query: 385  VCAKED*VW 359
                +D  W
Sbjct: 310  QIWSKDASW 318


>ref|XP_003633751.1| PREDICTED: solute carrier family 25 member 44-like isoform 2 [Vitis
            vinifera] gi|298204467|emb|CBI16947.3| unnamed protein
            product [Vitis vinifera]
          Length = 323

 Score =  458 bits (1178), Expect = e-126
 Identities = 224/306 (73%), Positives = 261/306 (85%), Gaps = 1/306 (0%)
 Frame = -3

Query: 1285 EINWDKLDKTKFYVVGAGLFTGVTVALYPISVVKTRLQVATKDSVEKNAFSVIRGLLRSE 1106
            EINWDKLDKTKFYVVGAGLFTG+T+ LYP+SV+KTRLQVA+ D+VE+NAFSVI+G+LR +
Sbjct: 15   EINWDKLDKTKFYVVGAGLFTGLTMGLYPVSVIKTRLQVASGDAVERNAFSVIKGILRMD 74

Query: 1105 GIPGLYRGFGTVITGAVPARIIFLTALETTKVATFNMIEPFSFSEPTKAALANGLAGMTS 926
            GIPGLYRGFGTVITGAVPARIIFLTALET+KVA F M+EPF  SE T+AA+ANG+AG+TS
Sbjct: 75   GIPGLYRGFGTVITGAVPARIIFLTALETSKVAAFKMVEPFKLSETTQAAVANGIAGLTS 134

Query: 925  SLFSQAVFVPIDVVSQKLMVQGYSGYTKYNGGLDVARKIVKTDGIRGLYRGFGLSVMTYS 746
            +LFSQAVFVPIDVVSQKLMVQGYSG+ KYNGGLDVARKI+K+DGIRGLYRGFGLSVMTY+
Sbjct: 135  ALFSQAVFVPIDVVSQKLMVQGYSGHQKYNGGLDVARKIIKSDGIRGLYRGFGLSVMTYA 194

Query: 745  PSSAVWWATYGSSQRVIWRLLDRAAEQKEPFFGDWTVVLVQXXXXXXXXXXXSCVTTPLD 566
            PSSAVWWA+YGS+QR IWR++    + ++      T+V VQ           SC+TTP+D
Sbjct: 195  PSSAVWWASYGSNQRFIWRVVGNGTDLEKESPSQGTIVAVQATGAIIAGVTASCITTPMD 254

Query: 565  TIKTRLQVMGH-GNRENARQVVKRLIVEDGWKGLYRGLGPRFVSMSVWGTSMITAYEYLK 389
            TIKTRLQV+ H G +   +QVVK LI +DGWKGLYRGLGPR  SMS WGTSMI AYEYLK
Sbjct: 255  TIKTRLQVLEHEGRKTTTKQVVKSLIADDGWKGLYRGLGPRLFSMSAWGTSMILAYEYLK 314

Query: 388  RVCAKE 371
            R+CAK+
Sbjct: 315  RLCAKD 320


>ref|XP_003531869.1| PREDICTED: solute carrier family 25 member 44-like [Glycine max]
          Length = 314

 Score =  457 bits (1175), Expect = e-126
 Identities = 221/306 (72%), Positives = 260/306 (84%)
 Frame = -3

Query: 1285 EINWDKLDKTKFYVVGAGLFTGVTVALYPISVVKTRLQVATKDSVEKNAFSVIRGLLRSE 1106
            EINWDKLDKT+FYVVGAGLFTGV+VALYP+SVVKTRLQVATKD+VE+N FSV +GLL+++
Sbjct: 9    EINWDKLDKTRFYVVGAGLFTGVSVALYPVSVVKTRLQVATKDAVERNVFSVAKGLLKTD 68

Query: 1105 GIPGLYRGFGTVITGAVPARIIFLTALETTKVATFNMIEPFSFSEPTKAALANGLAGMTS 926
            GIPGLYRGFGTVITGA+PARIIFL+ LETTKV  F M+EPF  SE ++AA+ANG+AGMTS
Sbjct: 69   GIPGLYRGFGTVITGAIPARIIFLSTLETTKVTAFRMLEPFRLSETSQAAIANGVAGMTS 128

Query: 925  SLFSQAVFVPIDVVSQKLMVQGYSGYTKYNGGLDVARKIVKTDGIRGLYRGFGLSVMTYS 746
            SLF+Q+VFVPIDVVSQKLMVQGYSG+++Y+GGLDV RK+++TDGIRGLYRGFGLSV+TY+
Sbjct: 129  SLFAQSVFVPIDVVSQKLMVQGYSGHSQYSGGLDVVRKVLRTDGIRGLYRGFGLSVITYA 188

Query: 745  PSSAVWWATYGSSQRVIWRLLDRAAEQKEPFFGDWTVVLVQXXXXXXXXXXXSCVTTPLD 566
            P+SAVWWA+YGSSQR IWR LD  A+  E       ++LVQ           SC+TTPLD
Sbjct: 189  PASAVWWASYGSSQRFIWRFLDHGAKYDEVAPSMQKIMLVQATGGIIAGATSSCITTPLD 248

Query: 565  TIKTRLQVMGHGNRENARQVVKRLIVEDGWKGLYRGLGPRFVSMSVWGTSMITAYEYLKR 386
            TIKTRLQVMGH NR + +QV K LI EDGW+G YRG GPRF SMS WGTSMI  YEYLKR
Sbjct: 249  TIKTRLQVMGHENRSSIKQVAKDLINEDGWRGFYRGFGPRFFSMSAWGTSMILTYEYLKR 308

Query: 385  VCAKED 368
            VC+K++
Sbjct: 309  VCSKDE 314


Top