BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020369
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031452.1| elongation factor-like protein [Arabidopsis ...   254   7e-66
dbj|BAD43027.1| putative GTP-binding protein [Arabidopsis thaliana]   254   7e-66
dbj|BAD94132.1| putative GTP-binding protein [Arabidopsis thaliana]   254   7e-66
ref|XP_003539953.1| PREDICTED: GTP-binding protein TypA/BipA hom...   253   2e-65
ref|XP_002881151.1| GTP binding protein [Arabidopsis lyrata subs...   251   8e-65

>ref|NP_001031452.1| elongation factor-like protein [Arabidopsis thaliana]
           gi|330253391|gb|AEC08485.1| elongation factor-like
           protein [Arabidopsis thaliana]
          Length = 667

 Score =  254 bits (649), Expect = 7e-66
 Identities = 141/190 (74%), Positives = 152/190 (80%), Gaps = 8/190 (4%)
 Frame = -2

Query: 546 ANPLLRSLFSSTTTRV------PMSFLHRITS-RSFSASPASTTKP-LLDRYLDPGRIRN 391
           A PLLRSL+S+TT R       P  F + ++S RSFSA+ AST      +  LDP R+RN
Sbjct: 2   AGPLLRSLWSNTTRRSFSSHSSPSKFGYSLSSLRSFSAATASTAAAGAPNSSLDPNRLRN 61

Query: 390 VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPWNDNELN 211
           VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSI+LERERGITISSKVTSI W DNELN
Sbjct: 62  VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSINLERERGITISSKVTSIFWKDNELN 121

Query: 210 MVDTPGHADFXXXXXXXXXXXXGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD 31
           MVDTPGHADF            GAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD
Sbjct: 122 MVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD 181

Query: 30  RPAVSEERCD 1
           RP+V+EERCD
Sbjct: 182 RPSVTEERCD 191


>dbj|BAD43027.1| putative GTP-binding protein [Arabidopsis thaliana]
          Length = 667

 Score =  254 bits (649), Expect = 7e-66
 Identities = 141/190 (74%), Positives = 152/190 (80%), Gaps = 8/190 (4%)
 Frame = -2

Query: 546 ANPLLRSLFSSTTTRV------PMSFLHRITS-RSFSASPASTTKP-LLDRYLDPGRIRN 391
           A PLLRSL+S+TT R       P  F + ++S RSFSA+ AST      +  LDP R+RN
Sbjct: 2   AGPLLRSLWSNTTRRSFSSHSSPSKFGYSLSSLRSFSAATASTAAAGAPNSSLDPNRLRN 61

Query: 390 VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPWNDNELN 211
           VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSI+LERERGITISSKVTSI W DNELN
Sbjct: 62  VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSINLERERGITISSKVTSIFWKDNELN 121

Query: 210 MVDTPGHADFXXXXXXXXXXXXGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD 31
           MVDTPGHADF            GAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD
Sbjct: 122 MVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD 181

Query: 30  RPAVSEERCD 1
           RP+V+EERCD
Sbjct: 182 RPSVTEERCD 191


>dbj|BAD94132.1| putative GTP-binding protein [Arabidopsis thaliana]
          Length = 668

 Score =  254 bits (649), Expect = 7e-66
 Identities = 141/190 (74%), Positives = 152/190 (80%), Gaps = 8/190 (4%)
 Frame = -2

Query: 546 ANPLLRSLFSSTTTRV------PMSFLHRITS-RSFSASPASTTKP-LLDRYLDPGRIRN 391
           A PLLRSL+S+TT R       P  F + ++S RSFSA+ AST      +  LDP R+RN
Sbjct: 3   AGPLLRSLWSNTTRRSFSSHSSPSKFGYSLSSLRSFSAATASTAAAGAPNSSLDPNRLRN 62

Query: 390 VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPWNDNELN 211
           VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSI+LERERGITISSKVTSI W DNELN
Sbjct: 63  VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSINLERERGITISSKVTSIFWKDNELN 122

Query: 210 MVDTPGHADFXXXXXXXXXXXXGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD 31
           MVDTPGHADF            GAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD
Sbjct: 123 MVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD 182

Query: 30  RPAVSEERCD 1
           RP+V+EERCD
Sbjct: 183 RPSVTEERCD 192


>ref|XP_003539953.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max]
          Length = 670

 Score =  253 bits (646), Expect = 2e-65
 Identities = 136/193 (70%), Positives = 146/193 (75%), Gaps = 11/193 (5%)
 Frame = -2

Query: 546 ANPLLRSLFSSTTTRVPMSFLH-----------RITSRSFSASPASTTKPLLDRYLDPGR 400
           A P+LRSL+SST      SF             R  SR+F+A+PA+ T       LDP  
Sbjct: 2   AGPILRSLWSSTRKSFSSSFSSSSSPSAPFSHSRFFSRTFAAAPAAATTATTASSLDPSH 61

Query: 399 IRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPWNDN 220
           +RNVAVIAHVDHGKTTLMDRLLRQCGAD+PHERAMDSISLERERGITISSKVTS+ W +N
Sbjct: 62  LRNVAVIAHVDHGKTTLMDRLLRQCGADLPHERAMDSISLERERGITISSKVTSVSWKEN 121

Query: 219 ELNMVDTPGHADFXXXXXXXXXXXXGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLN 40
           ELNMVDTPGHADF            GAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLN
Sbjct: 122 ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLN 181

Query: 39  KVDRPAVSEERCD 1
           KVDRPAVSEE CD
Sbjct: 182 KVDRPAVSEETCD 194


>ref|XP_002881151.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326990|gb|EFH57410.1| GTP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 667

 Score =  251 bits (640), Expect = 8e-65
 Identities = 139/190 (73%), Positives = 151/190 (79%), Gaps = 8/190 (4%)
 Frame = -2

Query: 546 ANPLLRSLFSSTTTRV------PMSFLHRITS-RSFSASPASTTKP-LLDRYLDPGRIRN 391
           A PLLRSL+S+TT R       P  F + ++S RSFSA+ AS+         LDP R+RN
Sbjct: 2   AGPLLRSLWSNTTRRSFSSQSSPSKFGYSLSSLRSFSAATASSAAAGAPSSSLDPNRLRN 61

Query: 390 VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPWNDNELN 211
           VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSI+LERERGITISSKVTSI W +NELN
Sbjct: 62  VAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSINLERERGITISSKVTSIFWKENELN 121

Query: 210 MVDTPGHADFXXXXXXXXXXXXGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD 31
           MVDTPGHADF            GAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD
Sbjct: 122 MVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD 181

Query: 30  RPAVSEERCD 1
           RP+V+EERCD
Sbjct: 182 RPSVTEERCD 191