BLASTX nr result

ID: Coptis24_contig00020367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020367
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264...   231   2e-58
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin...   211   2e-52
ref|XP_003624241.1| hypothetical protein MTR_7g080860 [Medicago ...   209   8e-52
ref|XP_002510510.1| conserved hypothetical protein [Ricinus comm...   204   2e-50
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub...   203   6e-50

>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
           gi|302142630|emb|CBI19833.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  231 bits (589), Expect = 2e-58
 Identities = 122/201 (60%), Positives = 152/201 (75%)
 Frame = -3

Query: 916 MEVLKVSDANMVVYIHPSKSNEVSEAIXXXXXXXXXXXSDVFDGVVLAYKVIDRSKDAKI 737
           ME L+VSDAN++VY+HPSK+N VS+AI           +++FDGVVLAY V   SKDAKI
Sbjct: 1   MEGLRVSDANLIVYVHPSKANRVSQAILRELSSLLFKFNEIFDGVVLAYDVDIPSKDAKI 60

Query: 736 LPGVHPYFGVRLRARLLLFSPKPGMLLEGKVNKVEKEKILVTVLGFSSAEISEEDIREEF 557
           LPG+HPYFGVRL+A+LLLFSPKP ML+EGKV K+ +E I + VLGFSSA I++E+IR EF
Sbjct: 61  LPGIHPYFGVRLKAKLLLFSPKPNMLIEGKVVKLAQESIHIVVLGFSSAIITDEEIRGEF 120

Query: 556 RYKRKHGKEVYASSYHKRHVIIVGSMIRFSVKRVACEDNLIFSGSLLPPSTGGIKWLDKH 377
           +YK KHG+ V+ S  HKRHVI VG+MIRF VK +  E+ L  SGSL PP TG I WLDK 
Sbjct: 121 KYKIKHGEAVFVSRSHKRHVIKVGTMIRFLVKSLD-EEILHISGSLNPPHTGSILWLDKK 179

Query: 376 MKDGPESERSAKKRKRESGDT 314
           ++D   S RS KKR RE+G++
Sbjct: 180 LEDASPSSRSTKKR-RENGES 199


>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
           gi|255631830|gb|ACU16282.1| unknown [Glycine max]
          Length = 232

 Score =  211 bits (538), Expect = 2e-52
 Identities = 119/195 (61%), Positives = 138/195 (70%)
 Frame = -3

Query: 916 MEVLKVSDANMVVYIHPSKSNEVSEAIXXXXXXXXXXXSDVFDGVVLAYKVIDRSKDAKI 737
           ME LKVS AN+ VYIHPSKSN+VS+A+           S++FDGVVLAY V      AKI
Sbjct: 1   MEGLKVSKANLTVYIHPSKSNQVSQAVLRQLSSLLFTFSEIFDGVVLAYDVNSFDTCAKI 60

Query: 736 LPGVHPYFGVRLRARLLLFSPKPGMLLEGKVNKVEKEKILVTVLGFSSAEISEEDIREEF 557
           L GVHPYFGV+L+  LLLFSPKP MLLEGKV KV +E I V VLGFSSA ISE+DIREEF
Sbjct: 61  LSGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIISEKDIREEF 120

Query: 556 RYKRKHGKEVYASSYHKRHVIIVGSMIRFSVKRVACEDNLIFSGSLLPPSTGGIKWLDKH 377
             K K G+EVY S  HKRHVI VG+MIRF VK    E+ L   GSL+P  TG I WLDK+
Sbjct: 121 VCKTKRGQEVYVSRSHKRHVIKVGTMIRFLVKSFD-EEILHVYGSLVPDHTGSIYWLDKN 179

Query: 376 MKDGPESERSAKKRK 332
           ++    S+RS KKR+
Sbjct: 180 LEVDSHSDRSEKKRR 194


>ref|XP_003624241.1| hypothetical protein MTR_7g080860 [Medicago truncatula]
           gi|124361023|gb|ABN08995.1| Nucleic acid-binding,
           OB-fold [Medicago truncatula]
           gi|355499256|gb|AES80459.1| hypothetical protein
           MTR_7g080860 [Medicago truncatula]
           gi|388494038|gb|AFK35085.1| unknown [Medicago
           truncatula]
          Length = 228

 Score =  209 bits (532), Expect = 8e-52
 Identities = 110/197 (55%), Positives = 143/197 (72%)
 Frame = -3

Query: 916 MEVLKVSDANMVVYIHPSKSNEVSEAIXXXXXXXXXXXSDVFDGVVLAYKVIDRSKDAKI 737
           ME LKVS +N+VVYIHPS+SN+VS+A+            ++FDGVVLAY V    K AK+
Sbjct: 1   MEGLKVSKSNLVVYIHPSQSNQVSKAVLRELSTLLFTYDEIFDGVVLAYYVDSLDKCAKV 60

Query: 736 LPGVHPYFGVRLRARLLLFSPKPGMLLEGKVNKVEKEKILVTVLGFSSAEISEEDIREEF 557
           LPGV+PYFGV L+  +LLFSPKP MLLEGKV KV  E I+V VLGF++A I+E+DIR EF
Sbjct: 61  LPGVYPYFGVNLKVNMLLFSPKPDMLLEGKVEKVTPEVIIVIVLGFATAIITEKDIRGEF 120

Query: 556 RYKRKHGKEVYASSYHKRHVIIVGSMIRFSVKRVACEDNLIFSGSLLPPSTGGIKWLDKH 377
           ++  KHG  V+AS YHKRHVI  G+M+RFSVK    E+ +   GSL+P +TG I+WLDK+
Sbjct: 121 KFTMKHG--VFASKYHKRHVIKKGTMLRFSVKSFD-EEQIYVYGSLVPDNTGNIQWLDKN 177

Query: 376 MKDGPESERSAKKRKRE 326
           ++    ++RS KKR+ E
Sbjct: 178 LEVVSHTDRSTKKRENE 194


>ref|XP_002510510.1| conserved hypothetical protein [Ricinus communis]
           gi|223551211|gb|EEF52697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  204 bits (519), Expect = 2e-50
 Identities = 112/200 (56%), Positives = 141/200 (70%)
 Frame = -3

Query: 916 MEVLKVSDANMVVYIHPSKSNEVSEAIXXXXXXXXXXXSDVFDGVVLAYKVIDRSKDAKI 737
           ME L +S+AN+VVY+HPS+S  VS+AI           ++ FDGVVLAY      K A+I
Sbjct: 1   MEGLSISEANLVVYVHPSQSKNVSQAILRELSSLLFKFNENFDGVVLAYAFNAPDKQARI 60

Query: 736 LPGVHPYFGVRLRARLLLFSPKPGMLLEGKVNKVEKEKILVTVLGFSSAEISEEDIREEF 557
           L GVHPYFGVRL+A +L+FSPKP MLLEGKV KV +E I V VLGFSSA I++EDIR+EF
Sbjct: 61  LCGVHPYFGVRLQATMLVFSPKPDMLLEGKVVKVTRESIHVIVLGFSSAIITDEDIRDEF 120

Query: 556 RYKRKHGKEVYASSYHKRHVIIVGSMIRFSVKRVACEDNLIFSGSLLPPSTGGIKWLDKH 377
           RYKRKHG+ +Y S  HK+HVI VG+MIRF VK +  E+ L  SGSL+P  TG I WL+  
Sbjct: 121 RYKRKHGEALYVSRPHKQHVIKVGTMIRFVVKSLD-EETLHISGSLVPTHTGSISWLEGD 179

Query: 376 MKDGPESERSAKKRKRESGD 317
           MK+   ++   KKR +  G+
Sbjct: 180 MKN-TTTDSGNKKRTQLDGE 198


>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Cucumis sativus] gi|449476884|ref|XP_004154864.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           rpa43-like [Cucumis sativus]
          Length = 231

 Score =  203 bits (516), Expect = 6e-50
 Identities = 107/202 (52%), Positives = 141/202 (69%)
 Frame = -3

Query: 916 MEVLKVSDANMVVYIHPSKSNEVSEAIXXXXXXXXXXXSDVFDGVVLAYKVIDRSKDAKI 737
           ME LKVSDANMVVY+HPSKS ++S+A+            + F+GV+LAY+     K+AKI
Sbjct: 1   MEGLKVSDANMVVYVHPSKSKKISQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 60

Query: 736 LPGVHPYFGVRLRARLLLFSPKPGMLLEGKVNKVEKEKILVTVLGFSSAEISEEDIREEF 557
           L GVHPYFGV ++A+LLLFSPKP MLLEGKV K+ +E I V VLGF+SA I+ EDIR+EF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEF 120

Query: 556 RYKRKHGKEVYASSYHKRHVIIVGSMIRFSVKRVACEDNLIFSGSLLPPSTGGIKWLDKH 377
           +++ KHG+E++ S  HK H+I VG+MIR  VK    E+ L  SGSL+P  TG I WL+K+
Sbjct: 121 KHRTKHGEEMFVSRAHKHHIIKVGTMIRLLVKSFD-EEILHISGSLVPSHTGSIHWLEKN 179

Query: 376 MKDGPESERSAKKRKRESGDTV 311
             +G  +    K R+ E G T+
Sbjct: 180 SVEGSVTMSKRKMRENEGGVTL 201


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