BLASTX nr result

ID: Coptis24_contig00020361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020361
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF14752.1|AF197760_1 maturase, partial (mitochondrion) [Xant...   130   8e-29
gb|ACD02204.1| maturase [Caulophyllum thalictroides]                  126   2e-27
gb|AAF14754.1|AF197762_1 maturase, partial (mitochondrion) [Podo...   124   8e-27
gb|AAF14781.1|AF197789_1 maturase, partial (mitochondrion) [Lard...   121   5e-26
gb|AAF14802.1|AF197810_1 maturase, partial (mitochondrion) [Akeb...   121   5e-26

>gb|AAF14752.1|AF197760_1 maturase, partial (mitochondrion) [Xanthorhiza simplicissima]
          Length = 591

 Score =  130 bits (328), Expect = 8e-29
 Identities = 63/70 (90%), Positives = 64/70 (91%), Gaps = 2/70 (2%)
 Frame = -2

Query: 205 EFPDTSHWSSG*GCHLALRRIKEKWGTSRGFLEFDIRKC--TIDRHRLISIFKEEINDPK 32
           EFPDTSHWSSG GCHLALRRIKE+WGTSR FLEFDIRKC  TIDRHRLI IFKEEINDPK
Sbjct: 9   EFPDTSHWSSGRGCHLALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLIPIFKEEINDPK 68

Query: 31  FFYFTHKLFS 2
           FFY THKLFS
Sbjct: 69  FFYPTHKLFS 78


>gb|ACD02204.1| maturase [Caulophyllum thalictroides]
          Length = 575

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/70 (87%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
 Frame = -2

Query: 205 EFPDTSHWSSG*GCHLALRRIKEKWGTSRGFLEFDIRKC--TIDRHRLISIFKEEINDPK 32
           EFPDTSHWSSG GCH ALRRIKE+WGTSR FLEFDIRKC  TIDRHRLI IFKEEI+DPK
Sbjct: 13  EFPDTSHWSSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPK 72

Query: 31  FFYFTHKLFS 2
           FFY THKLFS
Sbjct: 73  FFYPTHKLFS 82


>gb|AAF14754.1|AF197762_1 maturase, partial (mitochondrion) [Podophyllum peltatum]
          Length = 581

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/70 (85%), Positives = 62/70 (88%), Gaps = 2/70 (2%)
 Frame = -2

Query: 205 EFPDTSHWSSG*GCHLALRRIKEKWGTSRGFLEFDIRKC--TIDRHRLISIFKEEINDPK 32
           EFPDTSHWSSG GCH ALRRIKE+WGTS  FLEFDIRKC  TIDRHRLI IFKEEI+DPK
Sbjct: 2   EFPDTSHWSSGRGCHSALRRIKEEWGTSSWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPK 61

Query: 31  FFYFTHKLFS 2
           FFY THKLFS
Sbjct: 62  FFYPTHKLFS 71


>gb|AAF14781.1|AF197789_1 maturase, partial (mitochondrion) [Lardizabala biternata]
          Length = 590

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/70 (85%), Positives = 62/70 (88%), Gaps = 2/70 (2%)
 Frame = -2

Query: 205 EFPDTSHWSSG*GCHLALRRIKEKWGTSRGFLEFDIRKC--TIDRHRLISIFKEEINDPK 32
           EFPDTSH SSG GCH ALRRIKE+WGTSR FLEFDIRKC  TIDRHRLI IFKEEI+DPK
Sbjct: 9   EFPDTSHCSSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPK 68

Query: 31  FFYFTHKLFS 2
           FFY THKLFS
Sbjct: 69  FFYPTHKLFS 78


>gb|AAF14802.1|AF197810_1 maturase, partial (mitochondrion) [Akebia quinata]
          Length = 562

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/70 (85%), Positives = 62/70 (88%), Gaps = 2/70 (2%)
 Frame = -2

Query: 205 EFPDTSHWSSG*GCHLALRRIKEKWGTSRGFLEFDIRKC--TIDRHRLISIFKEEINDPK 32
           EFPDTSH SSG GCH ALRRIKE+WGTSR FLEFDIRKC  TIDRHRLI IFKEEI+DPK
Sbjct: 2   EFPDTSHCSSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLIPIFKEEIDDPK 61

Query: 31  FFYFTHKLFS 2
           FFY THKLFS
Sbjct: 62  FFYPTHKLFS 71


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