BLASTX nr result
ID: Coptis24_contig00020356
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020356 (990 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera] 147 3e-33 ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li... 138 2e-30 emb|CBI40731.3| unnamed protein product [Vitis vinifera] 135 2e-29 ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|2... 124 3e-26 ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ... 116 1e-23 >emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera] Length = 1261 Score = 147 bits (372), Expect = 3e-33 Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 1/331 (0%) Frame = +1 Query: 1 LKQYTSFEMSLEGLRSFFQVAKERSSHKNIDGPKFLDIKEDSMKPKVAYKGTGKCKNHKN 180 +KQY SF+MSLE L+SFF AKE+ K ++ + + + G+ + KN K Sbjct: 676 IKQYESFDMSLERLKSFFIDAKEQVGDKAVNVLQSAETNVQEILSMDQIIGSTRKKNQKL 735 Query: 181 NNSGLPCGEKVLSKYFSTEKTGRCAASSVLGNGDASLPNLYSRGDVVDLTFAQTDENAMG 360 + V + T++T R S + S G+ DE Sbjct: 736 KKPDHGVQKVVSNNTRVTKRTARICXSPTT-EYNTFFHQQRSPGNTKFQKXVLKDEEGFS 794 Query: 361 EHRDYVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGMRENSIFSSPAVFSNNDNS 540 ++Y+DLECS +KD R S++ AS D PE +VKETPG+ N +SP FS ++NS Sbjct: 795 XCKEYIDLECSPQKDSRCSKATSPASSHDGPEVSIVKETPGVDGNITQTSPXSFSKDENS 854 Query: 541 TSTIVQSHNDLSDRLSFHSSPAETSSGTLCEGKPSLMVTPER-IKPYTNDTKREAEPSFN 717 +STI+Q+ D D+ FHS SSG SL VTPER T++ E E N Sbjct: 855 SSTIIQASTDXPDQSLFHSMSYTNSSGPPSRAMCSLXVTPERDFIANTSNMMPETESPLN 914 Query: 718 LSVNSHTEKRRKPXXXXXXXXXXXXXXXNPDSKLPRADCKRMSTLKDTIHKIEFSSEVDH 897 LSVNSH +KRRK PD+K P M+T +D +IEF Sbjct: 915 LSVNSHAQKRRKSMILPSVNPTQAEHSDAPDAKTPGHIGNSMAT-RDANRRIEFGFGSKF 973 Query: 898 NKFEYTNLNVPQKPMMDNCGTLCLSSNIVMD 990 ++ + N+ Q M++C +SS MD Sbjct: 974 SEDKLKKSNIXQLLTMNHCDASSVSSCCSMD 1004 >ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera] Length = 1255 Score = 138 bits (348), Expect = 2e-30 Identities = 106/331 (32%), Positives = 148/331 (44%), Gaps = 1/331 (0%) Frame = +1 Query: 1 LKQYTSFEMSLEGLRSFFQVAKERSSHKNIDGPKFLDIKEDSMKPKVAYKGTGKCKNHKN 180 +KQY SF+MSLE L+SFF AKE+ K ++ + + + G+ + KN K Sbjct: 758 IKQYESFDMSLERLKSFFIDAKEQVGDKAVNVLQSAETNVQEILSMDQIIGSTRKKNQK- 816 Query: 181 NNSGLPCGEKVLSKYFSTEKTGRCAASSVLGNGDASLPNLYSRGDVVDLTFAQTDENAMG 360 L D + Q DE Sbjct: 817 -----------------------------LKKPDHGV---------------QKDEEGFS 832 Query: 361 EHRDYVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGMRENSIFSSPAVFSNNDNS 540 ++Y+DLECS +KD R S++ AS D PE +VKETPG+ N +SP FS ++NS Sbjct: 833 SCKEYIDLECSPQKDSRCSKATSPASSHDGPEVSIVKETPGVDGNITQTSPVSFSKDENS 892 Query: 541 TSTIVQSHNDLSDRLSFHSSPAETSSGTLCEGKPSLMVTPER-IKPYTNDTKREAEPSFN 717 +STI+Q+ DL D+ FHS SSG SL+VTPER T++ E E N Sbjct: 893 SSTIIQASTDLPDQSLFHSMSYTNSSGPPSRAMCSLLVTPERDFIANTSNMMPETESPLN 952 Query: 718 LSVNSHTEKRRKPXXXXXXXXXXXXXXXNPDSKLPRADCKRMSTLKDTIHKIEFSSEVDH 897 LSVNSH +KRRK PD+K P M+T +D +IEF Sbjct: 953 LSVNSHAQKRRKSMILPSVNPTQAEHSDAPDAKTPGHIGNSMAT-RDANRRIEFGFGSKF 1011 Query: 898 NKFEYTNLNVPQKPMMDNCGTLCLSSNIVMD 990 ++ + N+ Q M++C +SS MD Sbjct: 1012 SEDKLKKSNIRQLLTMNHCDASSVSSCCSMD 1042 >emb|CBI40731.3| unnamed protein product [Vitis vinifera] Length = 1218 Score = 135 bits (339), Expect = 2e-29 Identities = 101/301 (33%), Positives = 141/301 (46%), Gaps = 3/301 (0%) Frame = +1 Query: 1 LKQYTSFEMSLEGLRSFFQVAKERSSHKNIDGPKFLDIKEDSMKPKVAYKGTGKCKNHK- 177 +KQY SF+MSLE L+SFF AKE+ K ++ + + + G+ + KN K Sbjct: 739 IKQYESFDMSLERLKSFFIDAKEQVGDKAVNVLQSAETNVQEILSMDQIIGSTRKKNQKL 798 Query: 178 -NNNSGLPCGEKVLSKYFSTEKTGRCAASSVLGNGDASLPNLYSRGDVVDLTFAQTDENA 354 + G+ +KV+S +K DE Sbjct: 799 KKPDHGV---QKVVSNNTRFQK------------------------------LVLKDEEG 825 Query: 355 MGEHRDYVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGMRENSIFSSPAVFSNND 534 ++Y+DLECS +KD R S++ AS D PE +VKETPG+ N +SP FS ++ Sbjct: 826 FSSCKEYIDLECSPQKDSRCSKATSPASSHDGPEVSIVKETPGVDGNITQTSPVSFSKDE 885 Query: 535 NSTSTIVQSHNDLSDRLSFHSSPAETSSGTLCEGKPSLMVTPER-IKPYTNDTKREAEPS 711 NS+STI+Q+ DL D+ FHS SSG SL+VTPER T++ E E Sbjct: 886 NSSSTIIQASTDLPDQSLFHSMSYTNSSGPPSRAMCSLLVTPERDFIANTSNMMPETESP 945 Query: 712 FNLSVNSHTEKRRKPXXXXXXXXXXXXXXXNPDSKLPRADCKRMSTLKDTIHKIEFSSEV 891 NLSVNSH +KRRK PD+K P M+T +D +IEF + Sbjct: 946 LNLSVNSHAQKRRKSMILPSVNPTQAEHSDAPDAKTPGHIGNSMAT-RDANRRIEFGFGM 1004 Query: 892 D 894 D Sbjct: 1005 D 1005 >ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|222842363|gb|EEE79910.1| predicted protein [Populus trichocarpa] Length = 1183 Score = 124 bits (312), Expect = 3e-26 Identities = 113/338 (33%), Positives = 169/338 (50%), Gaps = 8/338 (2%) Frame = +1 Query: 1 LKQYTSFEMSLEGLRSFFQVAKERSSHKNIDGPKFLDIKEDSMKPKVAYK-----GTGKC 165 ++Q+ +F+MSLE LRSFF+ AKE+ KN++ +FL + D+ K K + G + Sbjct: 740 IQQHNNFDMSLEVLRSFFRNAKEKVG-KNME--EFL-LNSDTNKEKNIPRMDQIVGHTRN 795 Query: 166 KNHKNNNSGLPCGEKVLSKYFSTEKTGRCAASSVLGNGDASLPNLYSRGDV-VDLTFAQT 342 K+ K +NS GEK++S L + ++ L S+ DV V +F Sbjct: 796 KSQKLSNSD-QYGEKIVS----------------LTKCEGAVSKLKSQDDVEVQASFQID 838 Query: 343 DENAMGEHRDYVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGMRENSIFSSPAVF 522 DE + ++ +DLEC S R SE AS + PE +VKETPGM E +SP F Sbjct: 839 DE--LESSQEIIDLECDSHIGSRCSE----ASFHEDPEITLVKETPGMGECGAAASPGFF 892 Query: 523 SNNDNSTSTIVQSHNDLSDRLSFHSSPAETSSGTLCEGKPSLMVTPER-IKPYTNDTKRE 699 S + NS+ST++Q+ N+L+D+ S + + S++VTPE+ + T + + E Sbjct: 893 SKDGNSSSTMMQAPNELADQGLVSLVSVTNQSAAPDKSQCSMLVTPEKELTITTCNLRPE 952 Query: 700 AEPSFNLSVNSHTEKRRKPXXXXXXXXXXXXXXXNPDSKLPRADCKRMS-TLKDTIHKIE 876 E S NLSVNSHT+KRRK + R S T DT +IE Sbjct: 953 VESSLNLSVNSHTQKRRKSMDLSLINLQGEQSDTSYAETPGCVSFTRSSVTSGDTNRRIE 1012 Query: 877 FSSEVDHNKFEYTNLNVPQKPMMDNCGTLCLSSNIVMD 990 F E + + + T P P ++CGT C SS+ +MD Sbjct: 1013 FGLETNCRERQSTKHASPLLP--NSCGTSCASSDSLMD 1048 >ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus communis] gi|223551394|gb|EEF52880.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus communis] Length = 1248 Score = 116 bits (290), Expect = 1e-23 Identities = 99/333 (29%), Positives = 153/333 (45%), Gaps = 5/333 (1%) Frame = +1 Query: 7 QYTSFEMSLEGLRSFFQVAKERSSHKNIDGPKFLDIKEDSMKPKVAYKGTGKCKNHKNNN 186 QY S+ MS+EGL+SFF+ KE K +D + + + P+ G + KN K N Sbjct: 763 QYDSYSMSIEGLKSFFRDVKENIGKKMVDQLPNSETEGQKISPREPANGFTRKKNQKLNK 822 Query: 187 SGLPCGEKVLSKYFSTEKTGRCAASSVLGNGDASLPNLYSRGDVVDLTFAQTDENAMGEH 366 S G+ V S +C A S L + D ++ ++ Q D++ + Sbjct: 823 SDNCAGKLVSSM--------KCNAISHLKSQD-----------YIEQSYMQIDQD-IDSR 862 Query: 367 RDYVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGMRENSIFSSPAVFSNNDNSTS 546 R+ D+E K+ R E S + PE +VKETPGM N +S FS + NS+ Sbjct: 863 REITDVERDFPKESRFLEE----SSQEDPEMTLVKETPGMGFNGTTASSGSFSKDGNSSL 918 Query: 547 TIVQSHNDLSDRLSFHSSPAETSSGTLCEGKPSLMVTPER-IKPYTNDTKREAEPSFNLS 723 T++Q+ + +D+ S +S +S + SL VTP++ T EAE + NLS Sbjct: 919 TMIQASVEHTDQESSYSVSLTNASKDPGKACCSLAVTPKKDFNANTCSLIPEAESTLNLS 978 Query: 724 VNSHTEKRRKPXXXXXXXXXXXXXXXNPDSKLPRADCKRMST----LKDTIHKIEFSSEV 891 VNSHT+K+R+P +PD + P C R +T KD +IEF Sbjct: 979 VNSHTQKKRQP--IGLPFINLVEGPDSPDMESP--GCFRSTTDTMASKDANRRIEFDLAT 1034 Query: 892 DHNKFEYTNLNVPQKPMMDNCGTLCLSSNIVMD 990 D + + P+ +NC ++S+ VMD Sbjct: 1035 DSAEHQSMESKAPRVLPTNNCAPSSINSDPVMD 1067