BLASTX nr result

ID: Coptis24_contig00020341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020341
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513191.1| synaptotagmin, putative [Ricinus communis] g...   222   3e-56
ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-56
ref|XP_003545967.1| PREDICTED: multiple C2 and transmembrane dom...   220   8e-56
ref|XP_002330999.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_003539651.1| PREDICTED: multiple C2 and transmembrane dom...   215   3e-54

>ref|XP_002513191.1| synaptotagmin, putative [Ricinus communis]
            gi|223547689|gb|EEF49182.1| synaptotagmin, putative
            [Ricinus communis]
          Length = 1049

 Score =  222 bits (565), Expect = 3e-56
 Identities = 101/118 (85%), Positives = 110/118 (93%)
 Frame = +1

Query: 1    RSKANFFRIMSLLSGMITASKWFDDVCQWKNPITSVLVHVLFLILICYPELILPTLFLYM 180
            RSKANFFRIMSLLSGM + S+WF D+CQW+NP+TSVLVHVLFLILI YPELILPTLFLYM
Sbjct: 842  RSKANFFRIMSLLSGMFSMSRWFGDICQWRNPVTSVLVHVLFLILIWYPELILPTLFLYM 901

Query: 181  FLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDEEFDSFPTSKGHDIVRMRYDRLRS 354
            FLIG+WNYR RPRHPPHMD +LSWAEAVHPDELDEEFD+FPTS+ HD VRMRYDRLRS
Sbjct: 902  FLIGLWNYRFRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSRPHDTVRMRYDRLRS 959


>ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|222845707|gb|EEE83254.1|
            predicted protein [Populus trichocarpa]
          Length = 1051

 Score =  222 bits (565), Expect = 3e-56
 Identities = 101/117 (86%), Positives = 109/117 (93%)
 Frame = +1

Query: 1    RSKANFFRIMSLLSGMITASKWFDDVCQWKNPITSVLVHVLFLILICYPELILPTLFLYM 180
            RSKANFFRIMSL+SG+ + S WF D+CQW+NPITSVLVH+LFLILI YPELILPTLFLYM
Sbjct: 844  RSKANFFRIMSLISGLFSMSHWFGDICQWRNPITSVLVHILFLILIWYPELILPTLFLYM 903

Query: 181  FLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDEEFDSFPTSKGHDIVRMRYDRLR 351
            FLIGIWNYR RPRHPPHMD +LSWAEAVHPDELDEEFD+FPTSK HDIVRMRYDRLR
Sbjct: 904  FLIGIWNYRFRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSKSHDIVRMRYDRLR 960


>ref|XP_003545967.1| PREDICTED: multiple C2 and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 894

 Score =  220 bits (561), Expect = 8e-56
 Identities = 98/118 (83%), Positives = 108/118 (91%)
 Frame = +1

Query: 1    RSKANFFRIMSLLSGMITASKWFDDVCQWKNPITSVLVHVLFLILICYPELILPTLFLYM 180
            RSKANFFRIMSL SG+IT  +WF  VC WKNPITS+LVH+LFLILICYPELILPTLFLYM
Sbjct: 687  RSKANFFRIMSLFSGIITMGQWFSQVCHWKNPITSILVHILFLILICYPELILPTLFLYM 746

Query: 181  FLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDEEFDSFPTSKGHDIVRMRYDRLRS 354
            FLIG+WNYR RPRHPPHMD +LSWAE VHPDELDEEFD+FPTS+ HD+V+MRYDRLRS
Sbjct: 747  FLIGLWNYRFRPRHPPHMDTKLSWAEVVHPDELDEEFDTFPTSRPHDVVKMRYDRLRS 804


>ref|XP_002330999.1| predicted protein [Populus trichocarpa] gi|222872929|gb|EEF10060.1|
           predicted protein [Populus trichocarpa]
          Length = 796

 Score =  216 bits (549), Expect = 2e-54
 Identities = 96/118 (81%), Positives = 108/118 (91%)
 Frame = +1

Query: 1   RSKANFFRIMSLLSGMITASKWFDDVCQWKNPITSVLVHVLFLILICYPELILPTLFLYM 180
           RSKANFFRI+SL SG+I+ SKW  +VC+WKNP+T+VLVHVLF IL+CYPELILPT+FLYM
Sbjct: 589 RSKANFFRIVSLFSGVISISKWLGEVCKWKNPVTTVLVHVLFFILVCYPELILPTIFLYM 648

Query: 181 FLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDEEFDSFPTSKGHDIVRMRYDRLRS 354
           FLIGIWNYR RPRHPPHMD +LSWAEAVHPDELDEEFD+FPTSK  D+ RMRYDRLRS
Sbjct: 649 FLIGIWNYRLRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSKQQDVARMRYDRLRS 706


>ref|XP_003539651.1| PREDICTED: multiple C2 and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 1180

 Score =  215 bits (548), Expect = 3e-54
 Identities = 97/118 (82%), Positives = 107/118 (90%)
 Frame = +1

Query: 1    RSKANFFRIMSLLSGMITASKWFDDVCQWKNPITSVLVHVLFLILICYPELILPTLFLYM 180
            RSKANFFRIMSL SGMIT  KW  DVC WKN +TSVLVH+LFLILI YPELILPT+FLYM
Sbjct: 973  RSKANFFRIMSLFSGMITMGKWCSDVCLWKNHVTSVLVHILFLILIWYPELILPTMFLYM 1032

Query: 181  FLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDEEFDSFPTSKGHDIVRMRYDRLRS 354
            FLIG+WNYR RPRHPPHMD +LSWAEA+HPDELDEEFD+FPTS+ HD+VRMRYDRLR+
Sbjct: 1033 FLIGLWNYRFRPRHPPHMDTKLSWAEAIHPDELDEEFDTFPTSRSHDVVRMRYDRLRT 1090


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