BLASTX nr result
ID: Coptis24_contig00020328
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020328 (616 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276082.1| PREDICTED: uncharacterized protein LOC100241... 147 2e-33 ref|XP_002325440.1| predicted protein [Populus trichocarpa] gi|2... 144 1e-32 ref|XP_004144653.1| PREDICTED: uncharacterized protein LOC101220... 142 5e-32 ref|XP_002319192.1| predicted protein [Populus trichocarpa] gi|2... 141 8e-32 ref|XP_002873857.1| hypothetical protein ARALYDRAFT_488650 [Arab... 139 4e-31 >ref|XP_002276082.1| PREDICTED: uncharacterized protein LOC100241525 [Vitis vinifera] gi|296085904|emb|CBI31228.3| unnamed protein product [Vitis vinifera] Length = 160 Score = 147 bits (370), Expect = 2e-33 Identities = 72/106 (67%), Positives = 80/106 (75%), Gaps = 2/106 (1%) Frame = -1 Query: 601 ARQALVGDMHRSRSGDNSSFCYDKXXXXXXXXXPVALS--EKSIGDNPRCSVCEAKGAVL 428 A + VGD+HR RS S FCYDK P+ LS EK IGDNPRC C+AKGAVL Sbjct: 52 AESSSVGDVHRRRSSLESLFCYDKPIPEEIIEKPIGLSLAEKVIGDNPRCIDCQAKGAVL 111 Query: 427 CLTCTGSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290 C TC+GSGLY+DSI+ESQGI VKVRCLGCGGTGNIMCS+CGG GHL Sbjct: 112 CATCSGSGLYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRGHL 157 >ref|XP_002325440.1| predicted protein [Populus trichocarpa] gi|222862315|gb|EEE99821.1| predicted protein [Populus trichocarpa] Length = 173 Score = 144 bits (364), Expect = 1e-32 Identities = 70/101 (69%), Positives = 79/101 (78%), Gaps = 2/101 (1%) Frame = -1 Query: 586 VGDMHRSRSGDNSSFCYDKXXXXXXXXXPV--ALSEKSIGDNPRCSVCEAKGAVLCLTCT 413 +GD+HR RS S FCYDK PV +L+ K IGDNPRC+ C+AKGAVLC TC+ Sbjct: 70 MGDVHRRRSSLESLFCYDKPIPEERIEEPVGVSLAAKVIGDNPRCTDCQAKGAVLCTTCS 129 Query: 412 GSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290 GSGLY+DSIMESQGI VKVRCLGCGGTGNIMCS+CGG GHL Sbjct: 130 GSGLYVDSIMESQGIIVKVRCLGCGGTGNIMCSECGGLGHL 170 >ref|XP_004144653.1| PREDICTED: uncharacterized protein LOC101220837 [Cucumis sativus] Length = 161 Score = 142 bits (358), Expect = 5e-32 Identities = 68/108 (62%), Positives = 80/108 (74%), Gaps = 2/108 (1%) Frame = -1 Query: 607 NGARQALVGDMHRSRSGDNSSFCYDKXXXXXXXXXPVALS--EKSIGDNPRCSVCEAKGA 434 +G + D+HR RS S FCYDK P+ +S EK IG+NPRC+ C+AKGA Sbjct: 51 SGQGDSSAADVHRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGA 110 Query: 433 VLCLTCTGSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290 VLC TC+GSGLY+DSI+ESQGI VKVRCLGCGGTGNIMCS+CGG GHL Sbjct: 111 VLCATCSGSGLYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRGHL 158 >ref|XP_002319192.1| predicted protein [Populus trichocarpa] gi|222857568|gb|EEE95115.1| predicted protein [Populus trichocarpa] Length = 111 Score = 141 bits (356), Expect = 8e-32 Identities = 69/101 (68%), Positives = 78/101 (77%), Gaps = 2/101 (1%) Frame = -1 Query: 586 VGDMHRSRSGDNSSFCYDKXXXXXXXXXPVALS--EKSIGDNPRCSVCEAKGAVLCLTCT 413 VGD+HR RS S+F YDK PV +S EK IGDNPRC+ C+AKGAVLC TC Sbjct: 8 VGDVHRRRSSLESTFRYDKPIPEERIEEPVGISLAEKVIGDNPRCTDCQAKGAVLCTTCA 67 Query: 412 GSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290 GSGLY+DSI+ESQGI VKVRCLGCGGTGNIMCS+CGG GH+ Sbjct: 68 GSGLYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRGHV 108 >ref|XP_002873857.1| hypothetical protein ARALYDRAFT_488650 [Arabidopsis lyrata subsp. lyrata] gi|297319694|gb|EFH50116.1| hypothetical protein ARALYDRAFT_488650 [Arabidopsis lyrata subsp. lyrata] Length = 154 Score = 139 bits (350), Expect = 4e-31 Identities = 67/106 (63%), Positives = 76/106 (71%), Gaps = 2/106 (1%) Frame = -1 Query: 601 ARQALVGDMHRSRSGDNSSFCYDKXXXXXXXXXPVALS--EKSIGDNPRCSVCEAKGAVL 428 A L D+H+ RS S FCYDK PV LS E+ IGDN RC+ CEAKGA+L Sbjct: 47 AESCLKRDLHKQRSSLESMFCYDKPIPEEIIEEPVGLSMSEREIGDNQRCTCCEAKGALL 106 Query: 427 CLTCTGSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290 C TC+G+GLY+DSIMESQGI VKVRCLGCGGTGNIMC CGG GH+ Sbjct: 107 CATCSGTGLYVDSIMESQGIIVKVRCLGCGGTGNIMCKSCGGRGHV 152