BLASTX nr result

ID: Coptis24_contig00020328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020328
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276082.1| PREDICTED: uncharacterized protein LOC100241...   147   2e-33
ref|XP_002325440.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_004144653.1| PREDICTED: uncharacterized protein LOC101220...   142   5e-32
ref|XP_002319192.1| predicted protein [Populus trichocarpa] gi|2...   141   8e-32
ref|XP_002873857.1| hypothetical protein ARALYDRAFT_488650 [Arab...   139   4e-31

>ref|XP_002276082.1| PREDICTED: uncharacterized protein LOC100241525 [Vitis vinifera]
           gi|296085904|emb|CBI31228.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/106 (67%), Positives = 80/106 (75%), Gaps = 2/106 (1%)
 Frame = -1

Query: 601 ARQALVGDMHRSRSGDNSSFCYDKXXXXXXXXXPVALS--EKSIGDNPRCSVCEAKGAVL 428
           A  + VGD+HR RS   S FCYDK         P+ LS  EK IGDNPRC  C+AKGAVL
Sbjct: 52  AESSSVGDVHRRRSSLESLFCYDKPIPEEIIEKPIGLSLAEKVIGDNPRCIDCQAKGAVL 111

Query: 427 CLTCTGSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290
           C TC+GSGLY+DSI+ESQGI VKVRCLGCGGTGNIMCS+CGG GHL
Sbjct: 112 CATCSGSGLYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRGHL 157


>ref|XP_002325440.1| predicted protein [Populus trichocarpa] gi|222862315|gb|EEE99821.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  144 bits (364), Expect = 1e-32
 Identities = 70/101 (69%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
 Frame = -1

Query: 586 VGDMHRSRSGDNSSFCYDKXXXXXXXXXPV--ALSEKSIGDNPRCSVCEAKGAVLCLTCT 413
           +GD+HR RS   S FCYDK         PV  +L+ K IGDNPRC+ C+AKGAVLC TC+
Sbjct: 70  MGDVHRRRSSLESLFCYDKPIPEERIEEPVGVSLAAKVIGDNPRCTDCQAKGAVLCTTCS 129

Query: 412 GSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290
           GSGLY+DSIMESQGI VKVRCLGCGGTGNIMCS+CGG GHL
Sbjct: 130 GSGLYVDSIMESQGIIVKVRCLGCGGTGNIMCSECGGLGHL 170


>ref|XP_004144653.1| PREDICTED: uncharacterized protein LOC101220837 [Cucumis sativus]
          Length = 161

 Score =  142 bits (358), Expect = 5e-32
 Identities = 68/108 (62%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
 Frame = -1

Query: 607 NGARQALVGDMHRSRSGDNSSFCYDKXXXXXXXXXPVALS--EKSIGDNPRCSVCEAKGA 434
           +G   +   D+HR RS   S FCYDK         P+ +S  EK IG+NPRC+ C+AKGA
Sbjct: 51  SGQGDSSAADVHRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGA 110

Query: 433 VLCLTCTGSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290
           VLC TC+GSGLY+DSI+ESQGI VKVRCLGCGGTGNIMCS+CGG GHL
Sbjct: 111 VLCATCSGSGLYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRGHL 158


>ref|XP_002319192.1| predicted protein [Populus trichocarpa] gi|222857568|gb|EEE95115.1|
           predicted protein [Populus trichocarpa]
          Length = 111

 Score =  141 bits (356), Expect = 8e-32
 Identities = 69/101 (68%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
 Frame = -1

Query: 586 VGDMHRSRSGDNSSFCYDKXXXXXXXXXPVALS--EKSIGDNPRCSVCEAKGAVLCLTCT 413
           VGD+HR RS   S+F YDK         PV +S  EK IGDNPRC+ C+AKGAVLC TC 
Sbjct: 8   VGDVHRRRSSLESTFRYDKPIPEERIEEPVGISLAEKVIGDNPRCTDCQAKGAVLCTTCA 67

Query: 412 GSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290
           GSGLY+DSI+ESQGI VKVRCLGCGGTGNIMCS+CGG GH+
Sbjct: 68  GSGLYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRGHV 108


>ref|XP_002873857.1| hypothetical protein ARALYDRAFT_488650 [Arabidopsis lyrata subsp.
           lyrata] gi|297319694|gb|EFH50116.1| hypothetical protein
           ARALYDRAFT_488650 [Arabidopsis lyrata subsp. lyrata]
          Length = 154

 Score =  139 bits (350), Expect = 4e-31
 Identities = 67/106 (63%), Positives = 76/106 (71%), Gaps = 2/106 (1%)
 Frame = -1

Query: 601 ARQALVGDMHRSRSGDNSSFCYDKXXXXXXXXXPVALS--EKSIGDNPRCSVCEAKGAVL 428
           A   L  D+H+ RS   S FCYDK         PV LS  E+ IGDN RC+ CEAKGA+L
Sbjct: 47  AESCLKRDLHKQRSSLESMFCYDKPIPEEIIEEPVGLSMSEREIGDNQRCTCCEAKGALL 106

Query: 427 CLTCTGSGLYIDSIMESQGITVKVRCLGCGGTGNIMCSKCGGWGHL 290
           C TC+G+GLY+DSIMESQGI VKVRCLGCGGTGNIMC  CGG GH+
Sbjct: 107 CATCSGTGLYVDSIMESQGIIVKVRCLGCGGTGNIMCKSCGGRGHV 152