BLASTX nr result

ID: Coptis24_contig00020324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020324
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266606.1| PREDICTED: DUF246 domain-containing protein ...   187   1e-45
ref|XP_002330879.1| predicted protein [Populus trichocarpa] gi|2...   185   3e-45
ref|XP_004161417.1| PREDICTED: DUF246 domain-containing protein ...   183   1e-44
ref|XP_004149620.1| PREDICTED: DUF246 domain-containing protein ...   181   4e-44
ref|XP_002520639.1| conserved hypothetical protein [Ricinus comm...   180   9e-44

>ref|XP_002266606.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|297736200|emb|CBI24838.3| unnamed protein
           product [Vitis vinifera]
          Length = 536

 Score =  187 bits (474), Expect = 1e-45
 Identities = 92/116 (79%), Positives = 106/116 (91%)
 Frame = +3

Query: 111 DGV*LLRGLDSRLSKDLPSNLQKLPCKVAFEALRFSPPIVDLGNKLAERMRSKGIYIALH 290
           +GV LLRGLDSRLSKDLPS+LQKL CKVAF ALRFS PI++LGNK+AERMRSKG Y+ALH
Sbjct: 250 EGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFSQPILELGNKMAERMRSKGPYLALH 309

Query: 291 LRMEKDI*IRTGCLLGLSHKYDDIISSERKLQPELLIARSNMSYHARKLAGLCPLN 458
           LRMEKD+ +RTGCL GLS +YD+II++ERKL+PELL ARSNM+YH RKLAGLCPLN
Sbjct: 310 LRMEKDVWVRTGCLPGLSSQYDEIINNERKLRPELLTARSNMTYHERKLAGLCPLN 365


>ref|XP_002330879.1| predicted protein [Populus trichocarpa] gi|222872701|gb|EEF09832.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  185 bits (470), Expect = 3e-45
 Identities = 90/116 (77%), Positives = 105/116 (90%)
 Frame = +3

Query: 111 DGV*LLRGLDSRLSKDLPSNLQKLPCKVAFEALRFSPPIVDLGNKLAERMRSKGIYIALH 290
           +GV LLRGLDSRLSKDLPS+LQKL CKVAF ALRF+PP+++LGNKLAERMRSKG Y+ALH
Sbjct: 152 EGVLLLRGLDSRLSKDLPSDLQKLRCKVAFNALRFAPPVLELGNKLAERMRSKGPYLALH 211

Query: 291 LRMEKDI*IRTGCLLGLSHKYDDIISSERKLQPELLIARSNMSYHARKLAGLCPLN 458
           LRME D+ +RTGC  GLSH+YD+II++ERK +PELL ARSNM+YH RKLAGLCPLN
Sbjct: 212 LRMELDVWVRTGCQPGLSHEYDEIINNERKQRPELLTARSNMTYHERKLAGLCPLN 267


>ref|XP_004161417.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 572

 Score =  183 bits (464), Expect = 1e-44
 Identities = 91/116 (78%), Positives = 104/116 (89%)
 Frame = +3

Query: 111 DGV*LLRGLDSRLSKDLPSNLQKLPCKVAFEALRFSPPIVDLGNKLAERMRSKGIYIALH 290
           +GV LLRGLDSRLSKDLPS+LQKL CKVAF ALRF+PPIV+LGNKL ERMRSKG Y+ALH
Sbjct: 287 EGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPIVELGNKLTERMRSKGPYLALH 346

Query: 291 LRMEKDI*IRTGCLLGLSHKYDDIISSERKLQPELLIARSNMSYHARKLAGLCPLN 458
           LRMEKD+ +RTGCL GLS +YD++I++ER  +PELL ARSNMSYH RKLAGLCPLN
Sbjct: 347 LRMEKDVWVRTGCLPGLSPEYDEMINNERIRRPELLTARSNMSYHDRKLAGLCPLN 402


>ref|XP_004149620.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 556

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/116 (77%), Positives = 103/116 (88%)
 Frame = +3

Query: 111 DGV*LLRGLDSRLSKDLPSNLQKLPCKVAFEALRFSPPIVDLGNKLAERMRSKGIYIALH 290
           +GV LLRGLDSRLSKDLPS+LQKL CKVAF ALRF+PPIV+LGNK  ERMRSKG Y+ALH
Sbjct: 271 EGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALRFAPPIVELGNKFTERMRSKGPYLALH 330

Query: 291 LRMEKDI*IRTGCLLGLSHKYDDIISSERKLQPELLIARSNMSYHARKLAGLCPLN 458
           LRMEKD+ +RTGCL GLS +YD++I++ER  +PELL ARSNMSYH RKLAGLCPLN
Sbjct: 331 LRMEKDVWVRTGCLPGLSPEYDEMINNERIRRPELLTARSNMSYHDRKLAGLCPLN 386


>ref|XP_002520639.1| conserved hypothetical protein [Ricinus communis]
           gi|223540159|gb|EEF41735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 589

 Score =  180 bits (457), Expect = 9e-44
 Identities = 90/116 (77%), Positives = 102/116 (87%)
 Frame = +3

Query: 111 DGV*LLRGLDSRLSKDLPSNLQKLPCKVAFEALRFSPPIVDLGNKLAERMRSKGIYIALH 290
           +GV LLRGLDSRLSKDLPS+LQKL CKVAF AL F+P I++LGNKLAERMRSKG Y+ALH
Sbjct: 304 EGVLLLRGLDSRLSKDLPSDLQKLRCKVAFHALIFAPSILELGNKLAERMRSKGPYLALH 363

Query: 291 LRMEKDI*IRTGCLLGLSHKYDDIISSERKLQPELLIARSNMSYHARKLAGLCPLN 458
           LRMEKD+ +RTGCL GLS KYD+IIS ERK +PELL  RSNM+YH +KLAGLCPLN
Sbjct: 364 LRMEKDVWVRTGCLPGLSPKYDEIISDERKRRPELLTGRSNMTYHEKKLAGLCPLN 419


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