BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020320
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplasti...   202   2e-50
ref|XP_003558210.1| PREDICTED: psbP-like protein 2, chloroplasti...   199   3e-49
ref|NP_001173365.1| Os03g0279950 [Oryza sativa Japonica Group] g...   198   6e-49
ref|XP_004169488.1| PREDICTED: psbP-like protein 2, chloroplasti...   197   1e-48
ref|XP_004149826.1| PREDICTED: psbP-like protein 2, chloroplasti...   197   1e-48

>ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplastic [Vitis vinifera]
           gi|296086288|emb|CBI31729.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score =  202 bits (515), Expect = 2e-50
 Identities = 104/176 (59%), Positives = 128/176 (72%), Gaps = 4/176 (2%)
 Frame = +2

Query: 44  AASPLSLSWVSTLPKQLTESKTTIT----ARYTACPTLTINACSGDAISNEEACSRRLPI 211
           A S LSL WVST      +   +I     A +T+C +  I+ACS +   +EE+   R  +
Sbjct: 2   ALSSLSLGWVSTTISNKLDLPHSIDVPRFAAFTSCNS--ISACSRETAFDEESHLERRSL 59

Query: 212 LFGLGALAANFFQASSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRY 391
           L G+G LAAN F ASS+ AEE+P NY+AF+D  DGY+YYYP DWR+F+FRGHDSAFKDRY
Sbjct: 60  LLGVGLLAANLFPASSLHAEEIPANYKAFVDLSDGYSYYYPLDWREFEFRGHDSAFKDRY 119

Query: 392 LALQNVRVSFIPTNKTDIHDLGPMEEVIYNLVAHKFAAPSQKPTIFDMQERTVDGK 559
           L LQNVRVSFIPT+K DIHDLGPMEEV+ NLV + +AAP+Q  TI DMQE+ VDGK
Sbjct: 120 LQLQNVRVSFIPTDKRDIHDLGPMEEVVPNLVKNVYAAPNQIATILDMQEKVVDGK 175


>ref|XP_003558210.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Brachypodium
           distachyon]
          Length = 226

 Score =  199 bits (505), Expect = 3e-49
 Identities = 95/162 (58%), Positives = 120/162 (74%)
 Frame = +2

Query: 74  STLPKQLTESKTTITARYTACPTLTINACSGDAISNEEACSRRLPILFGLGALAANFFQA 253
           S + KQL     T+TAR    P   +NA S +A S+E+  ++R   L G GAL+      
Sbjct: 3   SLISKQLVALNCTVTARLNGAPPSVVNASSSEASSDEKKVTKRRLALLGAGALSTVLLNR 62

Query: 254 SSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRYLALQNVRVSFIPTN 433
           SS  AEEVPKNYR+++D+ DGY+Y YP+DWRDFDF GHDSAFKD+ + LQ+VRV+FIPT 
Sbjct: 63  SSAYAEEVPKNYRSYVDANDGYSYLYPADWRDFDFLGHDSAFKDKNVQLQSVRVAFIPTE 122

Query: 434 KTDIHDLGPMEEVIYNLVAHKFAAPSQKPTIFDMQERTVDGK 559
           KTDIHDLGPM+E I+NLV + +AAP+Q PTI+DMQERTVDGK
Sbjct: 123 KTDIHDLGPMDETIFNLVNNVYAAPNQIPTIYDMQERTVDGK 164


>ref|NP_001173365.1| Os03g0279950 [Oryza sativa Japonica Group]
           gi|222624678|gb|EEE58810.1| hypothetical protein
           OsJ_10361 [Oryza sativa Japonica Group]
           gi|255674406|dbj|BAH92093.1| Os03g0279950 [Oryza sativa
           Japonica Group]
          Length = 232

 Score =  198 bits (503), Expect = 6e-49
 Identities = 94/163 (57%), Positives = 122/163 (74%)
 Frame = +2

Query: 71  VSTLPKQLTESKTTITARYTACPTLTINACSGDAISNEEACSRRLPILFGLGALAANFFQ 250
           + ++ KQL      +T++  A P   +NA S +A S+E+  +RR   L G GALA    +
Sbjct: 8   ICSVSKQLVAPNCAVTSKLNASPLSVVNASSSEASSDEKNVTRRRLALLGAGALATGLLK 67

Query: 251 ASSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRYLALQNVRVSFIPT 430
           +SS  AEEVPKNY++++DS+DGY+Y YP+DWRDFDF GHDSAFKDR +ALQ VRV FIPT
Sbjct: 68  SSSAYAEEVPKNYKSYVDSKDGYSYLYPADWRDFDFLGHDSAFKDRNVALQCVRVGFIPT 127

Query: 431 NKTDIHDLGPMEEVIYNLVAHKFAAPSQKPTIFDMQERTVDGK 559
            KTDI DLGPM+E I+NLV + +AAP+Q PT++DMQERTVDGK
Sbjct: 128 TKTDIRDLGPMDEAIFNLVNNVYAAPNQIPTVYDMQERTVDGK 170


>ref|XP_004169488.1| PREDICTED: psbP-like protein 2, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 202

 Score =  197 bits (500), Expect = 1e-48
 Identities = 101/176 (57%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
 Frame = +2

Query: 44  AASPLSLSWV----STLPKQLTESKTTITARYTACPTLTINACSGDAISNEEACSRRLPI 211
           A S   LSWV    S    +L       TA  +   + TIN CS + IS +E    R P+
Sbjct: 2   AVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTIN-CSIERISRDEGIYNRRPL 60

Query: 212 LFGLGALAANFFQASSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRY 391
           L G+GALA +   AS + AEE+PKNYRAF+DS DGY+YYYPSDWR+FDFR HDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 392 LALQNVRVSFIPTNKTDIHDLGPMEEVIYNLVAHKFAAPSQKPTIFDMQERTVDGK 559
           L LQNVRV FIPT K DIH+ GP++EV+  LV H++AAP+QK TI+DM+ERT+DGK
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGK 176


>ref|XP_004149826.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 236

 Score =  197 bits (500), Expect = 1e-48
 Identities = 101/176 (57%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
 Frame = +2

Query: 44  AASPLSLSWV----STLPKQLTESKTTITARYTACPTLTINACSGDAISNEEACSRRLPI 211
           A S   LSWV    S    +L       TA  +   + TIN CS + IS +E    R P+
Sbjct: 2   AVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTIN-CSIERISRDEGIYNRRPL 60

Query: 212 LFGLGALAANFFQASSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRY 391
           L G+GALA +   AS + AEE+PKNYRAF+DS DGY+YYYPSDWR+FDFR HDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 392 LALQNVRVSFIPTNKTDIHDLGPMEEVIYNLVAHKFAAPSQKPTIFDMQERTVDGK 559
           L LQNVRV FIPT K DIH+ GP++EV+  LV H++AAP+QK TI+DM+ERT+DGK
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGK 176