BLASTX nr result

ID: Coptis24_contig00020314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020314
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316383.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002311079.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002273467.2| PREDICTED: thioredoxin-like 3-2, chloroplast...    61   8e-08
ref|NP_001238403.1| uncharacterized protein LOC100527081 [Glycin...    58   7e-07
ref|NP_196046.2| thioredoxin-like 3-2 [Arabidopsis thaliana] gi|...    55   6e-06

>ref|XP_002316383.1| predicted protein [Populus trichocarpa] gi|222865423|gb|EEF02554.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -1

Query: 419 VWKDSKKQAEVVGGHKAYLVVNEVREMIEN 330
           +WKDSKKQAEV+GGHKAYLV+NEVREMIEN
Sbjct: 98  LWKDSKKQAEVIGGHKAYLVINEVREMIEN 127


>ref|XP_002311079.1| predicted protein [Populus trichocarpa] gi|222850899|gb|EEE88446.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -1

Query: 419 VWKDSKKQAEVVGGHKAYLVVNEVREMIEN 330
           +WKDSKKQAEV+GGHKAYLV+NEVREMIEN
Sbjct: 98  LWKDSKKQAEVIGGHKAYLVINEVREMIEN 127


>ref|XP_002273467.2| PREDICTED: thioredoxin-like 3-2, chloroplastic-like [Vitis
           vinifera] gi|296085989|emb|CBI31430.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -1

Query: 419 VWKDSKKQAEVVGGHKAYLVVNEVREMIEN 330
           +WKDSKKQAEV+GGHKAY VVNEVREMIEN
Sbjct: 162 LWKDSKKQAEVIGGHKAYFVVNEVREMIEN 191


>ref|NP_001238403.1| uncharacterized protein LOC100527081 [Glycine max]
           gi|255631512|gb|ACU16123.1| unknown [Glycine max]
          Length = 198

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -1

Query: 419 VWKDSKKQAEVVGGHKAYLVVNEVREMIEN 330
           +W+DSKKQ EV+GGHKAYLV+NEV+EMIEN
Sbjct: 159 LWRDSKKQGEVIGGHKAYLVINEVQEMIEN 188


>ref|NP_196046.2| thioredoxin-like 3-2 [Arabidopsis thaliana]
           gi|52000834|sp|Q8VZT6.1|TRL32_ARATH RecName:
           Full=Thioredoxin-like 3-2, chloroplastic; AltName:
           Full=Thioredoxin WCRKC-2; Flags: Precursor
           gi|17380752|gb|AAL36206.1| putative thioredoxin
           [Arabidopsis thaliana] gi|21436391|gb|AAM51365.1|
           putative thioredoxin [Arabidopsis thaliana]
           gi|332003337|gb|AED90720.1| thioredoxin-like 3-2
           [Arabidopsis thaliana]
          Length = 192

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/30 (76%), Positives = 28/30 (93%)
 Frame = -1

Query: 419 VWKDSKKQAEVVGGHKAYLVVNEVREMIEN 330
           +W+D +KQAEV+GGHKA+ VVNEVREMIEN
Sbjct: 159 LWRDGQKQAEVIGGHKAHFVVNEVREMIEN 188


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