BLASTX nr result

ID: Coptis24_contig00020313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020313
         (1499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308913.1| predicted protein [Populus trichocarpa] gi|2...   393   e-119
ref|XP_003552309.1| PREDICTED: uncharacterized protein LOC100805...   373   e-109
emb|CBI30070.3| unnamed protein product [Vitis vinifera]              399   e-108
ref|XP_002274541.1| PREDICTED: uncharacterized protein LOC100260...   399   e-108
ref|XP_002530089.1| phosphatidylinositol N-acetylglucosaminyltra...   365   e-106

>ref|XP_002308913.1| predicted protein [Populus trichocarpa] gi|222854889|gb|EEE92436.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  393 bits (1009), Expect(2) = e-119
 Identities = 196/344 (56%), Positives = 248/344 (72%), Gaps = 3/344 (0%)
 Frame = -2

Query: 1300 IVDSDTACSWVLALLHDITNSWLRSGCVWLMGVPAGFKLNTELAGILGVISLNAIQIWST 1121
            ++ +++ C W+L   + ITN  LRSG VWLMGVPAGFKLNTELAG+LG+ISLNAIQIWST
Sbjct: 194  LIHAESVCQWILTFANVITNELLRSGSVWLMGVPAGFKLNTELAGVLGMISLNAIQIWST 253

Query: 1120 LWIYVAFLFRYFITGLALSGIIFGLTVPAALIVDMIMLATSHVSTLHRLISLIYSHQMKS 941
            LWI++ FLF YFI GLAL GI+FG T+PAALI+DM  +AT HVSTLH  ISL+YS Q+++
Sbjct: 254  LWIFIGFLFIYFIKGLALLGILFGATIPAALIIDMASIATLHVSTLHWAISLLYSWQIQA 313

Query: 940  LAALWRLFRGRKWNPLRQRFDSYDYTVKQHVVGSXXXXXXXXXXXXTSVFYIFFTILKTT 761
            LAALWRLFRGRKWNPLRQR DSYDYTVKQH+VGS            TSVFY+FFTIL TT
Sbjct: 314  LAALWRLFRGRKWNPLRQRLDSYDYTVKQHIVGSLLFTPLLLLLPTTSVFYMFFTILSTT 373

Query: 760  ISFICILIEVTISILHATPYHELFLWVVRPGRFPSGIWFDIKSCRSSKAVLGSAVVGCCN 581
            I+  CILIEVTIS++H+TPY ++FLW++R  RFPSGIWF+I SC++           C +
Sbjct: 374  IALSCILIEVTISMIHSTPYIKIFLWLMRRRRFPSGIWFEIASCQNDSLEFARHDKVCSS 433

Query: 580  ENILPRILQHRKMEEENNEGAH---VLLMSFQTNTASIGQIILPHYKAVFSGVSVLSGTS 410
                      +K    N+ G +   +++    +N  SIGQ++LPHY+ VFSGVS  + TS
Sbjct: 434  S---------KKSYRNNDRGENRPSIMVSFLHSNFLSIGQVVLPHYRKVFSGVSDFAITS 484

Query: 409  LAYGILMGSRVEAGLRTGLPSTVPWMFITYKDYWCLCFDSVLSC 278
             A+G L G R  + L T LPST+PW+ I  ++YWC C +SVL+C
Sbjct: 485  -AHGALTGKRTVSTLGTCLPSTMPWLSIPAREYWCFCRNSVLAC 527



 Score = 64.7 bits (156), Expect(2) = e-119
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = -1

Query: 1481 ALFLASFFTIIYSILQFFHRLLCYGSQASLCAVIEKVFSHTWENIYIRSCQLLYGPIRLQ 1302
            A+F+A+  T+ Y +LQ FH    +GS+  +     +VF  TW  I IR CQ+LY PI LQ
Sbjct: 93   AIFVATISTLFYIVLQLFHNFSSFGSKTRIYTTSARVFCTTWTQIQIRCCQILYWPIVLQ 152

Query: 1301 DSGFR 1287
            D+G R
Sbjct: 153  DNGLR 157


>ref|XP_003552309.1| PREDICTED: uncharacterized protein LOC100805383 [Glycine max]
          Length = 715

 Score =  373 bits (957), Expect(2) = e-109
 Identities = 182/338 (53%), Positives = 247/338 (73%)
 Frame = -2

Query: 1291 SDTACSWVLALLHDITNSWLRSGCVWLMGVPAGFKLNTELAGILGVISLNAIQIWSTLWI 1112
            +++ C  VL  +H  + S+LRSGCVWLMG PAGFKLN ELAG+LG+ SLNA+QIWSTLWI
Sbjct: 381  AESVCLSVLNFMHGFS-SFLRSGCVWLMGNPAGFKLNAELAGVLGMASLNAVQIWSTLWI 439

Query: 1111 YVAFLFRYFITGLALSGIIFGLTVPAALIVDMIMLATSHVSTLHRLISLIYSHQMKSLAA 932
            +V ++F Y I GL++ GI+ G TVPAAL++DMI LAT H+STLH  ISL+YS Q+++LAA
Sbjct: 440  FVGYIFNYIIQGLSVLGILCGFTVPAALVIDMIALATLHISTLHWFISLVYSSQIQALAA 499

Query: 931  LWRLFRGRKWNPLRQRFDSYDYTVKQHVVGSXXXXXXXXXXXXTSVFYIFFTILKTTISF 752
            LWRLFRGRKWNPLRQR DS+DYTVKQH+VGS            TSVFYIFF+I+ TTI+ 
Sbjct: 500  LWRLFRGRKWNPLRQRLDSFDYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFSIMDTTINL 559

Query: 751  ICILIEVTISILHATPYHELFLWVVRPGRFPSGIWFDIKSCRSSKAVLGSAVVGCCNENI 572
            +C+LIEVTIS++H TPY ++FLW+VRP RFPSGIW +I  C+S+     SA +     + 
Sbjct: 560  VCLLIEVTISVIHVTPYTKIFLWLVRPRRFPSGIWLEIIGCQSNSTASPSADI----TDE 615

Query: 571  LPRILQHRKMEEENNEGAHVLLMSFQTNTASIGQIILPHYKAVFSGVSVLSGTSLAYGIL 392
            +    +   +++ N E +  L+ +  +N  S+G+II PHYK VF GVS  + +++A+GIL
Sbjct: 616  MTSYKESLHLKDFNREKSSNLVSALHSNYLSLGKIISPHYKHVFLGVSGSTISTVAHGIL 675

Query: 391  MGSRVEAGLRTGLPSTVPWMFITYKDYWCLCFDSVLSC 278
            +G R+ +   T LPS +PW  + YK+YW +C DS+++C
Sbjct: 676  IGQRMPSMRGTLLPSPMPWTSMHYKEYWRVCHDSLIAC 713



 Score = 50.1 bits (118), Expect(2) = e-109
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -1

Query: 1499 ITCHFTALFLASFFTIIYSILQFFHRLLCYGSQASLCAVIEKVFSHT-WENIYIRSCQLL 1323
            +T H  + F AS  T++Y +LQFF     Y S++ +      VF  T W N+ IR CQ+L
Sbjct: 270  VTGHLFSKFWASISTMLYIVLQFFQTHFNYESESWVYGTSTNVFIKTAWINMRIRCCQIL 329

Query: 1322 YGPIRLQDSGFR 1287
            Y PI L ++  R
Sbjct: 330  YWPIFLWENDLR 341


>emb|CBI30070.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  399 bits (1024), Expect = e-108
 Identities = 204/362 (56%), Positives = 262/362 (72%), Gaps = 3/362 (0%)
 Frame = -2

Query: 1336 VASFFMGPYV--YRIVDSDTACSWVLALLHDITNSWLRSGCVWLMGVPAGFKLNTELAGI 1163
            V   F+G  +    +  +++AC  VL   H+ITN+ LRSGCVWLMGVPAGFKLNTELAGI
Sbjct: 255  VVDVFLGSLIGLALLFHAESACLCVLKFAHNITNNLLRSGCVWLMGVPAGFKLNTELAGI 314

Query: 1162 LGVISLNAIQIWSTLWIYVAFLFRYFITGLALSGIIFGLTVPAALIVDMIMLATSHVSTL 983
            LG+IS NAIQIWSTLW ++ FLF YFI GLA+SGII G+T+PAAL++DMI LAT HVS++
Sbjct: 315  LGMISFNAIQIWSTLWFHMGFLFIYFIKGLAISGIILGVTIPAALMIDMIALATLHVSSV 374

Query: 982  HRLISLIYSHQMKSLAALWRLFRGRKWNPLRQRFDSYDYTVKQHVVGSXXXXXXXXXXXX 803
            +  +SL+YS Q+++LAALWRLF GRKWNPLR+R DSYDYTV+QH+VGS            
Sbjct: 375  NWFLSLLYSLQIQALAALWRLFGGRKWNPLRRRLDSYDYTVEQHIVGSLLFTPLLLLLPT 434

Query: 802  TSVFYIFFTILKTTISFICILIEVTISILHATPYHELFLWVVRPGRFPSGIWFDIKSCRS 623
            TSVFYIFFTIL TTI  +CIL+E+TISI+HATPY ++FLW++ P RFPSG W +I S +S
Sbjct: 435  TSVFYIFFTILNTTICLLCILVEITISIIHATPYSKIFLWLMSPRRFPSGTWLEIISSQS 494

Query: 622  SKAVLGSAVVGCCNENILPRI-LQHRKMEEENNEGAHVLLMSFQTNTASIGQIILPHYKA 446
            +   + S  +GC NE   P    Q RK   E    + VL+   ++N ++IGQI+LPHYK 
Sbjct: 495  N--AIDSPEIGCLNEIGSPSTGTQQRKDSSERR--SSVLVSFLRSNLSNIGQILLPHYKN 550

Query: 445  VFSGVSVLSGTSLAYGILMGSRVEAGLRTGLPSTVPWMFITYKDYWCLCFDSVLSCLGRS 266
            +FSGV     TS A G+L G R+ + L TGLP+ +PWM I YK+YW LC DSV++C+   
Sbjct: 551  MFSGVCGSFITSSARGLLTGRRMPSTLGTGLPAPMPWMSIPYKEYWRLCRDSVIACMQNP 610

Query: 265  KH 260
            +H
Sbjct: 611  EH 612



 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
 Frame = -1

Query: 1499 ITCHFTALF-------LASFFTIIYSILQFFHRLLCYGSQASLCAVIEKVFSHTWENIYI 1341
            I C F+AL        +ASF T+ Y ILQ       YGS++ +C ++ K F +TW+NI I
Sbjct: 155  IVCMFSALIWNLLAISVASFSTLFYIILQLLSHFASYGSESWICIILAKAFCNTWKNIRI 214

Query: 1340 RSCQLLYGPIRL 1305
            R CQ+LY PI L
Sbjct: 215  RCCQILYWPIFL 226


>ref|XP_002274541.1| PREDICTED: uncharacterized protein LOC100260688 [Vitis vinifera]
          Length = 731

 Score =  399 bits (1024), Expect = e-108
 Identities = 204/362 (56%), Positives = 262/362 (72%), Gaps = 3/362 (0%)
 Frame = -2

Query: 1336 VASFFMGPYV--YRIVDSDTACSWVLALLHDITNSWLRSGCVWLMGVPAGFKLNTELAGI 1163
            V   F+G  +    +  +++AC  VL   H+ITN+ LRSGCVWLMGVPAGFKLNTELAGI
Sbjct: 370  VVDVFLGSLIGLALLFHAESACLCVLKFAHNITNNLLRSGCVWLMGVPAGFKLNTELAGI 429

Query: 1162 LGVISLNAIQIWSTLWIYVAFLFRYFITGLALSGIIFGLTVPAALIVDMIMLATSHVSTL 983
            LG+IS NAIQIWSTLW ++ FLF YFI GLA+SGII G+T+PAAL++DMI LAT HVS++
Sbjct: 430  LGMISFNAIQIWSTLWFHMGFLFIYFIKGLAISGIILGVTIPAALMIDMIALATLHVSSV 489

Query: 982  HRLISLIYSHQMKSLAALWRLFRGRKWNPLRQRFDSYDYTVKQHVVGSXXXXXXXXXXXX 803
            +  +SL+YS Q+++LAALWRLF GRKWNPLR+R DSYDYTV+QH+VGS            
Sbjct: 490  NWFLSLLYSLQIQALAALWRLFGGRKWNPLRRRLDSYDYTVEQHIVGSLLFTPLLLLLPT 549

Query: 802  TSVFYIFFTILKTTISFICILIEVTISILHATPYHELFLWVVRPGRFPSGIWFDIKSCRS 623
            TSVFYIFFTIL TTI  +CIL+E+TISI+HATPY ++FLW++ P RFPSG W +I S +S
Sbjct: 550  TSVFYIFFTILNTTICLLCILVEITISIIHATPYSKIFLWLMSPRRFPSGTWLEIISSQS 609

Query: 622  SKAVLGSAVVGCCNENILPRI-LQHRKMEEENNEGAHVLLMSFQTNTASIGQIILPHYKA 446
            +   + S  +GC NE   P    Q RK   E    + VL+   ++N ++IGQI+LPHYK 
Sbjct: 610  N--AIDSPEIGCLNEIGSPSTGTQQRKDSSERR--SSVLVSFLRSNLSNIGQILLPHYKN 665

Query: 445  VFSGVSVLSGTSLAYGILMGSRVEAGLRTGLPSTVPWMFITYKDYWCLCFDSVLSCLGRS 266
            +FSGV     TS A G+L G R+ + L TGLP+ +PWM I YK+YW LC DSV++C+   
Sbjct: 666  MFSGVCGSFITSSARGLLTGRRMPSTLGTGLPAPMPWMSIPYKEYWRLCRDSVIACMQNP 725

Query: 265  KH 260
            +H
Sbjct: 726  EH 727



 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
 Frame = -1

Query: 1499 ITCHFTALF-------LASFFTIIYSILQFFHRLLCYGSQASLCAVIEKVFSHTWENIYI 1341
            I C F+AL        +ASF T+ Y ILQ       YGS++ +C ++ K F +TW+NI I
Sbjct: 270  IVCMFSALIWNLLAISVASFSTLFYIILQLLSHFASYGSESWICIILAKAFCNTWKNIRI 329

Query: 1340 RSCQLLYGPIRL 1305
            R CQ+LY PI L
Sbjct: 330  RCCQILYWPIFL 341


>ref|XP_002530089.1| phosphatidylinositol N-acetylglucosaminyltransferase, putative
            [Ricinus communis] gi|223530400|gb|EEF32288.1|
            phosphatidylinositol N-acetylglucosaminyltransferase,
            putative [Ricinus communis]
          Length = 755

 Score =  365 bits (938), Expect(2) = e-106
 Identities = 189/329 (57%), Positives = 233/329 (70%)
 Frame = -2

Query: 1300 IVDSDTACSWVLALLHDITNSWLRSGCVWLMGVPAGFKLNTELAGILGVISLNAIQIWST 1121
            + ++++ C W+     D TN  LRSGCVWLMGVPAGFKLNTELAG+LG+ISLNAIQIWST
Sbjct: 359  LFNAESTCLWLSTFATDFTNELLRSGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWST 418

Query: 1120 LWIYVAFLFRYFITGLALSGIIFGLTVPAALIVDMIMLATSHVSTLHRLISLIYSHQMKS 941
            LWI++ FL  YFI GLA+ GI+FG T+PAA+I+D++ LAT HV+TLHR +SL+YS Q+++
Sbjct: 419  LWIFIGFLAIYFIKGLAVLGILFGATIPAAMIMDIVALATFHVTTLHRAMSLLYSRQIQA 478

Query: 940  LAALWRLFRGRKWNPLRQRFDSYDYTVKQHVVGSXXXXXXXXXXXXTSVFYIFFTILKTT 761
            LAALWRLFRGRKWNPLRQR DSYDYTVKQH VGS            TSVFYIFFTIL T 
Sbjct: 479  LAALWRLFRGRKWNPLRQRLDSYDYTVKQHTVGSLLFTPLLLLLPTTSVFYIFFTILNTG 538

Query: 760  ISFICILIEVTISILHATPYHELFLWVVRPGRFPSGIWFDIKSCRSSKAVLGSAVVGCCN 581
            I+FIC+LIEVTIS++H TPY ++ LW+VR  RFPSGIWF+I SC S     GS     C 
Sbjct: 539  ITFICVLIEVTISVIHGTPYIKILLWLVRRRRFPSGIWFEIVSCHS-----GSLEFVYC- 592

Query: 580  ENILPRILQHRKMEEENNEGAHVLLMSFQTNTASIGQIILPHYKAVFSGVSVLSGTSLAY 401
              I P     +K E      + V + +  +N  SIGQ++ PHYK +FSGVS    T+ AY
Sbjct: 593  --ISPPSDDSQKREGSKKRSSTV-VSTLHSNFLSIGQVVSPHYKKIFSGVSSFV-TASAY 648

Query: 400  GILMGSRVEAGLRTGLPSTVPWMFITYKD 314
            G L G+R  +   T LPST+P M I  K+
Sbjct: 649  GALTGTRTSSTFGTALPSTMPLMTIPGKE 677



 Score = 46.6 bits (109), Expect(2) = e-106
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -1

Query: 1490 HFTALFLASFFTIIYSILQFFHRLLCYG-SQASLCAVIEKVFSHTWENIYIRSCQLLYGP 1314
            H  A+ +AS  T+ Y  LQ F+     G     +     ++F  TW NI IR  Q+ Y P
Sbjct: 254  HVFAISVASVSTLFYVTLQIFYSFSSRGLKDVEIYNTSARIFCTTWTNIKIRCSQISYWP 313

Query: 1313 IRLQDSGFR 1287
            I LQD+G R
Sbjct: 314  IFLQDNGLR 322


Top