BLASTX nr result

ID: Coptis24_contig00020297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020297
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246...   113   1e-23
ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806...   108   4e-22
ref|XP_002521339.1| conserved hypothetical protein [Ricinus comm...   105   5e-21
ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801...   104   8e-21

>ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|222841574|gb|EEE79121.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = -2

Query: 455 TIIRAGLLQSTPGGKQGFSFKEGSAAQGKLSKEDAAFICVQALDAVPQRGVTFEVVNGDE 276
           TIIR G+LQ TPGG QGFSF++GSA +G LSKEDAAFICV+ALD VPQ G TFE VNG+E
Sbjct: 226 TIIRVGMLQDTPGGTQGFSFEKGSAEKGSLSKEDAAFICVEALDVVPQIGFTFEAVNGEE 285

Query: 275 NISDWKEYLESLIQNMEQR 219
            +SDWKE L  L++  EQ+
Sbjct: 286 KVSDWKERLTRLMEKSEQQ 304


>ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246327 [Vitis vinifera]
           gi|297743019|emb|CBI35886.3| unnamed protein product
           [Vitis vinifera]
          Length = 303

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/79 (64%), Positives = 67/79 (84%)
 Frame = -2

Query: 455 TIIRAGLLQSTPGGKQGFSFKEGSAAQGKLSKEDAAFICVQALDAVPQRGVTFEVVNGDE 276
           TIIRAGLLQ++PGGK+GFSFKEG AA G+LSKEDAAFICV+A+D VP+ G+ FEV NG E
Sbjct: 223 TIIRAGLLQNSPGGKEGFSFKEGVAATGRLSKEDAAFICVEAVDTVPETGLVFEVANGGE 282

Query: 275 NISDWKEYLESLIQNMEQR 219
            +SDWKE  ++L++  +++
Sbjct: 283 KVSDWKECFKALVEKPDKQ 301


>ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806043 [Glycine max]
          Length = 312

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/79 (63%), Positives = 58/79 (73%)
 Frame = -2

Query: 455 TIIRAGLLQSTPGGKQGFSFKEGSAAQGKLSKEDAAFICVQALDAVPQRGVTFEVVNGDE 276
           TIIR G LQ TPGGKQGF+F EG AA G +SKEDAAF+CV A D VPQ G  FEV NGD 
Sbjct: 232 TIIRTGALQDTPGGKQGFTFDEGCAASGSISKEDAAFVCVAAFDCVPQTGFIFEVANGDN 291

Query: 275 NISDWKEYLESLIQNMEQR 219
            +SDWKE L +L++   Q+
Sbjct: 292 KVSDWKECLATLMEKASQK 310


>ref|XP_002521339.1| conserved hypothetical protein [Ricinus communis]
           gi|223539417|gb|EEF41007.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/77 (63%), Positives = 61/77 (79%)
 Frame = -2

Query: 455 TIIRAGLLQSTPGGKQGFSFKEGSAAQGKLSKEDAAFICVQALDAVPQRGVTFEVVNGDE 276
           TIIR G+LQ+TPGG QGF+F++G A +G LSKEDAAFICV+AL+ VPQ    FEVVNG+E
Sbjct: 225 TIIRVGMLQNTPGGTQGFNFEKGCAEKGSLSKEDAAFICVEALETVPQAEFIFEVVNGEE 284

Query: 275 NISDWKEYLESLIQNME 225
            +SDWKE L  L++  E
Sbjct: 285 KVSDWKECLARLMEKAE 301


>ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801216 [Glycine max]
          Length = 316

 Score =  104 bits (259), Expect = 8e-21
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = -2

Query: 455 TIIRAGLLQSTPGGKQGFSFKEGSAAQGKLSKEDAAFICVQALDAVPQRGVTFEVVNGDE 276
           TIIR G L   PGGK+GF+F EG AA+G +SKEDAAF+CV ALD VPQ G  FEV NGD 
Sbjct: 236 TIIRTGALLDAPGGKRGFTFDEGCAARGSISKEDAAFVCVAALDCVPQTGFIFEVANGDN 295

Query: 275 NISDWKEYLESLIQNMEQR 219
            +SDWKE L +L++   Q+
Sbjct: 296 KVSDWKECLATLMEETSQK 314


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