BLASTX nr result

ID: Coptis24_contig00020290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020290
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329293.1| predicted protein [Populus trichocarpa] gi|2...   159   5e-37
ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|2...   148   2e-33
ref|XP_002531306.1| conserved hypothetical protein [Ricinus comm...   147   2e-33
ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263...   132   9e-29
emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]   132   9e-29

>ref|XP_002329293.1| predicted protein [Populus trichocarpa] gi|222870747|gb|EEF07878.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  159 bits (403), Expect = 5e-37
 Identities = 89/198 (44%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
 Frame = -3

Query: 800 TDSLDSIQFVLDGTDRNNIGIVRNDLYYASEVIINADILLGS--LSESHRVGDFPVAPLL 627
           TD L+ +  +L   +    G+  N L +A EVI+N ++L G+  L  S R+  F +  LL
Sbjct: 167 TDLLNHVSRILQSINLAGGGLTGNQLSHAKEVILNTELLFGNATLCNSDRMKRFLIGSLL 226

Query: 626 -DKLGALPDAPWSTPNCGMEIVGSKDGYQRRKFLLDCLLEFLDSKYGVYCKSRFKAWPTL 450
            D   AL  A W   NC +    SKDG Q R+FLLDC +E LDSKY  YC S FKAW  +
Sbjct: 227 LDGHEALAGAMWKNLNCLLGFEDSKDGIQLRRFLLDCEIECLDSKYSRYCYSGFKAWKRV 286

Query: 449 PFQVNGESLTKEVYEEIQRCEEFVGKSSDDILMRDMNHSLGSWMDFEVEAFEIGQKIESD 270
           P  +N E L +E+ EE++R  +F G   D+I+  +M+HSLG W DFE+E FE G +I+ D
Sbjct: 287 PSCMNVEMLIQEIGEEVRRWSDFAGMIPDEIIDWEMSHSLGKWTDFEIEGFETGAEIDWD 346

Query: 269 ILQVLVNEVVIDL-EQCR 219
           ILQ LV E+ +DL E CR
Sbjct: 347 ILQTLVEEIAVDLWEWCR 364


>ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|222848135|gb|EEE85682.1|
            predicted protein [Populus trichocarpa]
          Length = 978

 Score =  148 bits (373), Expect = 2e-33
 Identities = 83/197 (42%), Positives = 116/197 (58%), Gaps = 3/197 (1%)
 Frame = -3

Query: 800  TDSLDSIQFVLDGTDRNNIGIVRNDLYYASEVIINADILLG--SLSESHRVGDFPVAP-L 630
            TD L+ +  +L   +     +  N L +A EVI+NA++L G  +L  S R+  F V P L
Sbjct: 778  TDLLNHVSRILQSINLAGGRLTGNKLTHAKEVILNAELLFGKATLCNSDRMKRFLVGPFL 837

Query: 629  LDKLGALPDAPWSTPNCGMEIVGSKDGYQRRKFLLDCLLEFLDSKYGVYCKSRFKAWPTL 450
            LD L  L  A W   NC      SK+G Q R FL DC++E LDSKY     + FK    +
Sbjct: 838  LDGLETLAGALWKNLNCLPGFEESKEGNQLRSFLFDCVIECLDSKYTRCINTGFKTRKRV 897

Query: 449  PFQVNGESLTKEVYEEIQRCEEFVGKSSDDILMRDMNHSLGSWMDFEVEAFEIGQKIESD 270
            P  +N E L +E+ +E++R  +F G   D+I+  +M+HSLG W DFE+E FE G +I+SD
Sbjct: 898  PSCMNAEMLIQEIGDEVRRWTDFAGMIPDEIIDSEMSHSLGKWTDFEIEGFETGAEIDSD 957

Query: 269  ILQVLVNEVVIDLEQCR 219
            ILQ LV E+ +DL +CR
Sbjct: 958  ILQALVEEIAVDLWECR 974


>ref|XP_002531306.1| conserved hypothetical protein [Ricinus communis]
            gi|223529097|gb|EEF31078.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 869

 Score =  147 bits (372), Expect = 2e-33
 Identities = 82/198 (41%), Positives = 118/198 (59%), Gaps = 3/198 (1%)
 Frame = -3

Query: 803  MTDSLDSIQFVLDGTDRNNIGIVRNDLYYASEVIINADILLGS--LSESHRVGDFPVAP- 633
            +TD L+ +  +L   +  + G+    L Y  EVI+NA++L GS  L  S R+    + P 
Sbjct: 668  VTDLLNHLSVILQSINLADGGLTGARLTYVREVILNAELLFGSAALQNSDRMKSSFIGPF 727

Query: 632  LLDKLGALPDAPWSTPNCGMEIVGSKDGYQRRKFLLDCLLEFLDSKYGVYCKSRFKAWPT 453
            LL++L  L    W+  NC      SK+G + R+FL D ++E LDSKY  YC S +KAW  
Sbjct: 728  LLNELETLAGTMWTNFNCLSGFEESKEGSEVRRFLFDSVIECLDSKYSRYCNSGYKAWRR 787

Query: 452  LPFQVNGESLTKEVYEEIQRCEEFVGKSSDDILMRDMNHSLGSWMDFEVEAFEIGQKIES 273
            +P  +  E L +EV +EI+R  +  G   D+I+  +M+H+LG W DFE+E FE G  I+ 
Sbjct: 788  VPSCMKAEILIEEVGKEIRRWTDMAGMIPDEIIEWEMSHALGKWTDFEIETFETGADIDW 847

Query: 272  DILQVLVNEVVIDLEQCR 219
            DILQVLV+E+VID   CR
Sbjct: 848  DILQVLVDEIVIDFWNCR 865


>ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263470 [Vitis vinifera]
            gi|296087265|emb|CBI33639.3| unnamed protein product
            [Vitis vinifera]
          Length = 1004

 Score =  132 bits (332), Expect = 9e-29
 Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
 Frame = -3

Query: 809  DKMTDSLDSIQFVLDGTDRNNIGIVRNDLYYASEVIINADILLGS--LSESHRVGDFPVA 636
            + + D ++ I  ++   +     +  + L +  EVI+NA++L G+  L+ S     F   
Sbjct: 799  EAVADLVNYISSIVHAINLPGARLGGSKLTHVKEVILNAELLFGNAALANSDGCRSFLGH 858

Query: 635  PLLDKLGALPDAPWSTPNC--GMEIVGSKDGYQRRKFLLDCLLEFLDSKYGVYCKSRFKA 462
             L+ +L  L  A W+  +   G E   +K   Q   FL D ++E+LD+KY ++  S +KA
Sbjct: 859  FLVAELETLTCATWTKSDIFPGFED-NTKGRNQVTGFLFDSVIEYLDTKYCIHADSGYKA 917

Query: 461  WPTLPFQVNGESLTKEVYEEIQRCEEFVGKSSDDILMRDMNHSLGSWMDFEVEAFEIGQK 282
            W  LP+ +NGE L K V EEI+R  +  G+  D+I+  +M+HSLG W DFE+E FE G +
Sbjct: 918  WTRLPWLMNGEKLIKLVVEEIRRWADLAGRIPDEIIEWEMSHSLGKWTDFEIEGFETGAE 977

Query: 281  IESDILQVLVNEVVIDLEQC 222
            I+SDILQ+LV+E+V+DL++C
Sbjct: 978  IDSDILQILVDEIVVDLKEC 997


>emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]
          Length = 1101

 Score =  132 bits (332), Expect = 9e-29
 Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
 Frame = -3

Query: 809  DKMTDSLDSIQFVLDGTDRNNIGIVRNDLYYASEVIINADILLGS--LSESHRVGDFPVA 636
            + + D ++ I  ++   +     +  + L +  EVI+NA++L G+  L+ S     F   
Sbjct: 896  EAVADLVNYISSIVHAINLPGARLGGSKLTHVKEVILNAELLFGNAALANSDGCRSFLGH 955

Query: 635  PLLDKLGALPDAPWSTPNC--GMEIVGSKDGYQRRKFLLDCLLEFLDSKYGVYCKSRFKA 462
             L+ +L  L  A W+  +   G E   +K   Q   FL D ++E+LD+KY ++  S +KA
Sbjct: 956  FLVAELETLTCATWTKSDIFPGFED-NTKGRNQVTGFLFDSVIEYLDTKYCIHADSGYKA 1014

Query: 461  WPTLPFQVNGESLTKEVYEEIQRCEEFVGKSSDDILMRDMNHSLGSWMDFEVEAFEIGQK 282
            W  LP+ +NGE L K V EEI+R  +  G+  D+I+  +M+HSLG W DFE+E FE G +
Sbjct: 1015 WTRLPWLMNGEKLIKLVVEEIRRWADLAGRIPDEIIEWEMSHSLGKWTDFEIEGFETGAE 1074

Query: 281  IESDILQVLVNEVVIDLEQC 222
            I+SDILQ+LV+E+V+DL++C
Sbjct: 1075 IDSDILQILVDEIVVDLKEC 1094


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