BLASTX nr result

ID: Coptis24_contig00020285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020285
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319340.1| predicted protein [Populus trichocarpa] gi|2...   217   9e-55
ref|XP_004168019.1| PREDICTED: glycerol-3-phosphate dehydrogenas...   214   8e-54
emb|CBI25349.3| unnamed protein product [Vitis vinifera]              211   4e-53
ref|XP_002275322.1| PREDICTED: glycerol-3-phosphate dehydrogenas...   211   4e-53
ref|XP_002520875.1| glycerol-3-phosphate dehydrogenase, putative...   211   4e-53

>ref|XP_002319340.1| predicted protein [Populus trichocarpa] gi|222857716|gb|EEE95263.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  217 bits (552), Expect = 9e-55
 Identities = 105/122 (86%), Positives = 114/122 (93%)
 Frame = +3

Query: 3   LLLRDPLVCDSINQHHYNCKYFPEHKLPENVVATSDAKAALLGADFCLHAVPVQFSSSFL 182
           +LLRDPL+C SIN++H NCKYFPEHKLP+NV+AT+DAKAALL ADFCLHAVPVQFSSSFL
Sbjct: 66  MLLRDPLLCQSINENHCNCKYFPEHKLPDNVIATTDAKAALLDADFCLHAVPVQFSSSFL 125

Query: 183 ESISEHVDPNLPFISLSKGLELNTLRMMSQIIPQALGNPRQPFVALSGPSFALELMKKLP 362
           E I+E+VDP LPFISLSKGLELNTLRMMSQIIPQALGNP QPFV LSGPSFALELM KLP
Sbjct: 126 EGIAEYVDPGLPFISLSKGLELNTLRMMSQIIPQALGNPYQPFVLLSGPSFALELMNKLP 185

Query: 363 TA 368
           TA
Sbjct: 186 TA 187


>ref|XP_004168019.1| PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] 2,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 447

 Score =  214 bits (544), Expect = 8e-54
 Identities = 104/122 (85%), Positives = 112/122 (91%)
 Frame = +3

Query: 3   LLLRDPLVCDSINQHHYNCKYFPEHKLPENVVATSDAKAALLGADFCLHAVPVQFSSSFL 182
           +LLRDPLVC SIN  HYN KYFP+HKLP NV+AT+DAKAALLGADFC HAVPVQFSSSFL
Sbjct: 144 MLLRDPLVCQSINDGHYNSKYFPKHKLPINVIATTDAKAALLGADFCFHAVPVQFSSSFL 203

Query: 183 ESISEHVDPNLPFISLSKGLELNTLRMMSQIIPQALGNPRQPFVALSGPSFALELMKKLP 362
           ESI+ HVDP+LPFISLSKGLELN+LRMMSQI+PQAL NPRQPFVALSGPSFA ELM KLP
Sbjct: 204 ESIAHHVDPHLPFISLSKGLELNSLRMMSQIVPQALSNPRQPFVALSGPSFASELMNKLP 263

Query: 363 TA 368
           TA
Sbjct: 264 TA 265


>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  211 bits (538), Expect = 4e-53
 Identities = 101/122 (82%), Positives = 113/122 (92%)
 Frame = +3

Query: 3   LLLRDPLVCDSINQHHYNCKYFPEHKLPENVVATSDAKAALLGADFCLHAVPVQFSSSFL 182
           +L+R+  VC SIN++H NCKYFPEHKLPENV+AT+DA+AALLGAD+CLHAVPVQFSSSFL
Sbjct: 110 MLVRNSQVCQSINENHCNCKYFPEHKLPENVIATTDARAALLGADYCLHAVPVQFSSSFL 169

Query: 183 ESISEHVDPNLPFISLSKGLELNTLRMMSQIIPQALGNPRQPFVALSGPSFALELMKKLP 362
           E I++ VDP LPFISLSKGLELNT RMMSQIIPQALGNPRQPF+ALSGPSFALELM KLP
Sbjct: 170 EGIADSVDPTLPFISLSKGLELNTFRMMSQIIPQALGNPRQPFIALSGPSFALELMNKLP 229

Query: 363 TA 368
           TA
Sbjct: 230 TA 231


>ref|XP_002275322.1| PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(P)+]-like [Vitis
           vinifera]
          Length = 413

 Score =  211 bits (538), Expect = 4e-53
 Identities = 101/122 (82%), Positives = 113/122 (92%)
 Frame = +3

Query: 3   LLLRDPLVCDSINQHHYNCKYFPEHKLPENVVATSDAKAALLGADFCLHAVPVQFSSSFL 182
           +L+R+  VC SIN++H NCKYFPEHKLPENV+AT+DA+AALLGAD+CLHAVPVQFSSSFL
Sbjct: 110 MLVRNSQVCQSINENHCNCKYFPEHKLPENVIATTDARAALLGADYCLHAVPVQFSSSFL 169

Query: 183 ESISEHVDPNLPFISLSKGLELNTLRMMSQIIPQALGNPRQPFVALSGPSFALELMKKLP 362
           E I++ VDP LPFISLSKGLELNT RMMSQIIPQALGNPRQPF+ALSGPSFALELM KLP
Sbjct: 170 EGIADSVDPTLPFISLSKGLELNTFRMMSQIIPQALGNPRQPFIALSGPSFALELMNKLP 229

Query: 363 TA 368
           TA
Sbjct: 230 TA 231


>ref|XP_002520875.1| glycerol-3-phosphate dehydrogenase, putative [Ricinus communis]
           gi|223540006|gb|EEF41584.1| glycerol-3-phosphate
           dehydrogenase, putative [Ricinus communis]
          Length = 410

 Score =  211 bits (538), Expect = 4e-53
 Identities = 101/122 (82%), Positives = 112/122 (91%)
 Frame = +3

Query: 3   LLLRDPLVCDSINQHHYNCKYFPEHKLPENVVATSDAKAALLGADFCLHAVPVQFSSSFL 182
           +LLRD  VC SIN++H NCKYFP+HKLP+NV+AT+D K+ALLGAD+CLHAVPVQFSSSFL
Sbjct: 107 MLLRDSFVCQSINENHCNCKYFPQHKLPDNVIATTDPKSALLGADYCLHAVPVQFSSSFL 166

Query: 183 ESISEHVDPNLPFISLSKGLELNTLRMMSQIIPQALGNPRQPFVALSGPSFALELMKKLP 362
           E I+E VDP LPFISLSKGLELNTLRMMSQIIPQAL NPRQPF+ALSGPSFALELM KLP
Sbjct: 167 EGIAEFVDPGLPFISLSKGLELNTLRMMSQIIPQALNNPRQPFIALSGPSFALELMNKLP 226

Query: 363 TA 368
           TA
Sbjct: 227 TA 228


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