BLASTX nr result

ID: Coptis24_contig00020271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020271
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634372.1| PREDICTED: ocs element-binding factor 1-like...   165   2e-38
ref|XP_002306888.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-37
ref|XP_002510435.1| Ocs element-binding factor, putative [Ricinu...   158   3e-36
ref|XP_002313781.1| predicted protein [Populus trichocarpa] gi|1...   154   6e-35
ref|XP_002302016.1| predicted protein [Populus trichocarpa] gi|2...   152   1e-34

>ref|XP_003634372.1| PREDICTED: ocs element-binding factor 1-like [Vitis vinifera]
          Length = 154

 Score =  165 bits (418), Expect = 2e-38
 Identities = 81/133 (60%), Positives = 105/133 (78%)
 Frame = +1

Query: 592 EDLRVSTDQRKRKRMLSNRESAKRSRLRKKKHLDGLAAQVERIRKENNEILATLNITTQY 771
           EDL+   DQRKRKRMLSNRESA+RSR+RK+KHLD L AQV ++RKENNEIL+++NIT Q 
Sbjct: 22  EDLQHVMDQRKRKRMLSNRESARRSRMRKQKHLDDLMAQVAQLRKENNEILSSINITNQR 81

Query: 772 YLNIESENSVLRAQMGELSHRLQSLNDIINYLHSSAIDLESQNHQTSIDDFINPWNLFYQ 951
           YL +E++NS+LRAQ  ELSHR QSLNDI+NY+++S    E+++   ++D F+NP N  Y 
Sbjct: 82  YLTVEADNSILRAQAMELSHRYQSLNDILNYMNTSNGVFETEDLPVTVDPFMNPMNYLYL 141

Query: 952 NQAIVTSTDMFEY 990
           NQ I+ S DMF Y
Sbjct: 142 NQPIIASVDMFPY 154


>ref|XP_002306888.1| predicted protein [Populus trichocarpa] gi|222856337|gb|EEE93884.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  162 bits (409), Expect = 2e-37
 Identities = 78/127 (61%), Positives = 105/127 (82%), Gaps = 1/127 (0%)
 Frame = +1

Query: 613 DQRKRKRMLSNRESAKRSRLRKKKHLDGLAAQVERIRKENNEILATLNITTQYYLNIESE 792
           DQRKRKRM SNRESA+RSR++K+KHLD L AQV ++RK+NN+IL T+N+TTQ+YLN+E+E
Sbjct: 29  DQRKRKRMQSNRESARRSRMKKQKHLDDLMAQVTQLRKDNNQILTTINVTTQHYLNVEAE 88

Query: 793 NSVLRAQMGELSHRLQSLNDIINYLHSSAIDLESQNHQTSID-DFINPWNLFYQNQAIVT 969
           NS+LRAQM EL+HRL SLN+I+NY+++S    E+ +H+   D  F+NP NLFY NQ I+ 
Sbjct: 89  NSILRAQMMELNHRLDSLNEILNYINTSNGIFENDHHEDLPDHSFMNPSNLFYLNQPIMA 148

Query: 970 STDMFEY 990
           S D+F+Y
Sbjct: 149 SPDLFQY 155


>ref|XP_002510435.1| Ocs element-binding factor, putative [Ricinus communis]
           gi|223551136|gb|EEF52622.1| Ocs element-binding factor,
           putative [Ricinus communis]
          Length = 163

 Score =  158 bits (399), Expect = 3e-36
 Identities = 79/143 (55%), Positives = 110/143 (76%), Gaps = 10/143 (6%)
 Frame = +1

Query: 592 EDLRVSTDQRKRKRMLSNRESAKRSRLRKKKHLDGLAAQVERIRKENNEILATLNITTQY 771
           ED++V  DQRKRKRMLSNRESA+RSR+RK++HLD L +QV ++RK+N++IL ++NITTQ+
Sbjct: 21  EDMQVLMDQRKRKRMLSNRESARRSRMRKQQHLDDLMSQVSQLRKDNSQILTSINITTQH 80

Query: 772 YLNIESENSVLRAQMGELSHRLQSLNDIINYLHSSA------IDLESQNHQ----TSIDD 921
           +LN+E+ENS+LRAQM ELS RL SLN+I+NY++++       ID    +HQ     + D 
Sbjct: 81  FLNVEAENSILRAQMMELSQRLDSLNEILNYINTTTSNGIYEIDHPHHHHQDATAVAADS 140

Query: 922 FINPWNLFYQNQAIVTSTDMFEY 990
           F+NP NL Y NQ I+ S D+F+Y
Sbjct: 141 FMNPLNLIYLNQPIMASPDLFQY 163


>ref|XP_002313781.1| predicted protein [Populus trichocarpa] gi|118484762|gb|ABK94250.1|
           unknown [Populus trichocarpa]
           gi|118487006|gb|ABK95334.1| unknown [Populus
           trichocarpa] gi|222850189|gb|EEE87736.1| predicted
           protein [Populus trichocarpa]
          Length = 155

 Score =  154 bits (388), Expect = 6e-35
 Identities = 76/135 (56%), Positives = 106/135 (78%), Gaps = 2/135 (1%)
 Frame = +1

Query: 592 EDLRVSTDQRKRKRMLSNRESAKRSRLRKKKHLDGLAAQVERIRKENNEILATLNITTQY 771
           E+L+   DQRKRKRM+SNRESA+RSR+RK+KHLD L AQV +++KEN++I+ ++NITTQ+
Sbjct: 21  ENLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAQLKKENHQIITSINITTQH 80

Query: 772 YLNIESENSVLRAQMGELSHRLQSLNDIINYLHSS--AIDLESQNHQTSIDDFINPWNLF 945
           YLN+E++NS+LRAQ+ ELSHRL+ LN II+ L+SS       S  ++ + D F+NP+N+ 
Sbjct: 81  YLNVEADNSILRAQVSELSHRLEFLNGIISLLNSSNGLFGDSSIFNEPAADSFLNPFNMS 140

Query: 946 YQNQAIVTSTDMFEY 990
           Y NQ I  S DMF+Y
Sbjct: 141 YLNQPISASADMFQY 155


>ref|XP_002302016.1| predicted protein [Populus trichocarpa] gi|222843742|gb|EEE81289.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  152 bits (385), Expect = 1e-34
 Identities = 79/137 (57%), Positives = 106/137 (77%), Gaps = 4/137 (2%)
 Frame = +1

Query: 592 EDLRVSTDQRKRKRMLSNRESAKRSRLRKKKHLDGLAAQVERIRKENNEILATLNITTQY 771
           E+  V  DQRKRKRMLSNRESA+RSR+RK+K+L  L AQV ++R +NN+IL T+N+TTQ+
Sbjct: 20  EEQVVLVDQRKRKRMLSNRESARRSRMRKQKYLGDLMAQVAQLRTDNNQILTTINVTTQH 79

Query: 772 YLNIESENSVLRAQMGELSHRLQSLNDIINYLHSSAIDLESQNH---QTSID-DFINPWN 939
           +LN+E+ENS+LRAQM EL+HRL SLN+I+NY+++S    E  +H   QTS D  F+NP N
Sbjct: 80  FLNVEAENSILRAQMMELNHRLDSLNEILNYINTSNGIFEIDHHEDLQTSADHGFMNPLN 139

Query: 940 LFYQNQAIVTSTDMFEY 990
           L   NQ I+ S D+F+Y
Sbjct: 140 LILLNQPIMASPDLFQY 156


Top