BLASTX nr result

ID: Coptis24_contig00020269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020269
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154489.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    78   8e-13
ref|XP_004139728.1| PREDICTED: uncharacterized protein LOC101206...    78   8e-13
ref|XP_002883938.1| leucine-rich repeat family protein [Arabidop...    70   2e-10
ref|XP_002267362.2| PREDICTED: uncharacterized protein LOC100261...    69   5e-10
ref|XP_003553520.1| PREDICTED: uncharacterized protein LOC100817...    69   5e-10

>ref|XP_004154489.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101227026 [Cucumis sativus]
          Length = 604

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/68 (55%), Positives = 48/68 (70%)
 Frame = -1

Query: 209 GRSLHSLDLCDNHLGPNFAKLVFDTLLGVSSGLSILDLSENNISGWLSSFTGKFSSSVPS 30
           GR L+S  LCDN LG NF K VF TLL  SS LS+LDLSEN ++GWLS+F  +  + + +
Sbjct: 287 GRYLYSFKLCDNDLGKNFGKFVFHTLLDASSCLSVLDLSENKMTGWLSNFNRRSLTGLQA 346

Query: 29  SSAIGNSL 6
           SS +G SL
Sbjct: 347 SSMVGKSL 354


>ref|XP_004139728.1| PREDICTED: uncharacterized protein LOC101206924 [Cucumis sativus]
          Length = 604

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/68 (55%), Positives = 48/68 (70%)
 Frame = -1

Query: 209 GRSLHSLDLCDNHLGPNFAKLVFDTLLGVSSGLSILDLSENNISGWLSSFTGKFSSSVPS 30
           GR L+S  LCDN LG NF K VF TLL  SS LS+LDLSEN ++GWLS+F  +  + + +
Sbjct: 287 GRYLYSFKLCDNDLGKNFGKFVFHTLLDASSCLSVLDLSENKMTGWLSNFNRRSLTGLQA 346

Query: 29  SSAIGNSL 6
           SS +G SL
Sbjct: 347 SSMVGKSL 354


>ref|XP_002883938.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329778|gb|EFH60197.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 603

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 10/77 (12%)
 Frame = -1

Query: 206 RSLHSLDLCDNHLGPNFAKLVFDTLLGVSSGLSILDLSENNISGWLSSF----------T 57
           R+LHSL  CD++L  + A++VF TLL  SS LS LDLSENNISGWLS+F          +
Sbjct: 290 RTLHSLHFCDSNLDRHIARMVFSTLLDSSSNLSSLDLSENNISGWLSTFSCRSVVGSLSS 349

Query: 56  GKFSSSVPSSSAIGNSL 6
           GKF  S+   +  GN L
Sbjct: 350 GKFLQSLCKLNLRGNEL 366


>ref|XP_002267362.2| PREDICTED: uncharacterized protein LOC100261775 [Vitis vinifera]
          Length = 834

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/68 (54%), Positives = 45/68 (66%)
 Frame = -1

Query: 209 GRSLHSLDLCDNHLGPNFAKLVFDTLLGVSSGLSILDLSENNISGWLSSFTGKFSSSVPS 30
           GRSL SL   DN LG NFAKLVF+TLL  SS LS L+  +NNI+GWL +F  + S+    
Sbjct: 348 GRSLCSLKFSDNRLGKNFAKLVFNTLLDASSRLSTLNFEDNNITGWLFNFNQRSSTWPLP 407

Query: 29  SSAIGNSL 6
           S  +G SL
Sbjct: 408 SFGLGKSL 415


>ref|XP_003553520.1| PREDICTED: uncharacterized protein LOC100817679 [Glycine max]
          Length = 625

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/67 (56%), Positives = 44/67 (65%)
 Frame = -1

Query: 206 RSLHSLDLCDNHLGPNFAKLVFDTLLGVSSGLSILDLSENNISGWLSSFTGKFSSSVPSS 27
           RSL SL L DN  G  FAK +F TLL +SSG+S+LDLSEN I+GWLS F  +F S    S
Sbjct: 309 RSLCSLKLSDNQHGRTFAKDLFVTLLNLSSGISVLDLSENRIAGWLSDFNRRFLSGSHMS 368

Query: 26  SAIGNSL 6
              G SL
Sbjct: 369 FGNGKSL 375


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